Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 RNU7-106P-201ENST00000459514 67 ntBASIC-0.08□□□□□ -2.42
LIMK1P53667 MIR4645-201ENST00000583158 77 ntBASIC-0.08□□□□□ -2.42
LIMK1P53667 MIR4743-201ENST00000584576 69 ntBASIC-0.08□□□□□ -2.42
LIMK1P53667 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.09□□□□□ -2.42
LIMK1P53667 MIR516A2-201ENST00000384888 90 ntBASIC-0.09□□□□□ -2.42
LIMK1P53667 MIR516A1-201ENST00000385033 90 ntBASIC-0.09□□□□□ -2.42
LIMK1P53667 MIR569-201ENST00000385228 96 ntBASIC-0.09□□□□□ -2.42
LIMK1P53667 MIR519A1-201ENST00000385257 85 ntBASIC-0.09□□□□□ -2.42
LIMK1P53667 RNA5SP272-201ENST00000516095 111 ntBASIC-0.09□□□□□ -2.42
LIMK1P53667 RNU6-1061P-201ENST00000516530 99 ntBASIC-0.09□□□□□ -2.42
LIMK1P53667 NAMPTP3-201ENST00000569273 224 ntBASIC-0.09□□□□□ -2.42
LIMK1P53667 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.1□□□□□ -2.43
LIMK1P53667 SNORD95.1-201ENST00000364099 68 ntBASIC-0.1□□□□□ -2.43
LIMK1P53667 RNU6-302P-201ENST00000365249 107 ntBASIC-0.1□□□□□ -2.43
LIMK1P53667 MIR548D2-201ENST00000384955 97 ntBASIC-0.1□□□□□ -2.43
LIMK1P53667 MIR214-201ENST00000385214 110 ntBASIC-0.1□□□□□ -2.43
LIMK1P53667 MIR501-201ENST00000390204 84 ntBASIC-0.1□□□□□ -2.43
LIMK1P53667 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.1□□□□□ -2.43
LIMK1P53667 MTND5P41-201ENST00000517498 206 ntBASIC-0.1□□□□□ -2.43
LIMK1P53667 RNU6-235P-201ENST00000362644 107 ntBASIC-0.11□□□□□ -2.43
LIMK1P53667 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.11□□□□□ -2.43
LIMK1P53667 RNU6-781P-201ENST00000516377 101 ntBASIC-0.11□□□□□ -2.43
LIMK1P53667 MIR3920-201ENST00000581751 86 ntBASIC-0.11□□□□□ -2.43
LIMK1P53667 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.11□□□□□ -2.43
LIMK1P53667 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.12□□□□□ -2.43
LIMK1P53667 RNY4P6-201ENST00000363667 96 ntBASIC-0.12□□□□□ -2.43
LIMK1P53667 Y_RNA.507-201ENST00000384500 99 ntBASIC-0.12□□□□□ -2.43
LIMK1P53667 RNU6-735P-201ENST00000410612 107 ntBASIC-0.12□□□□□ -2.43
LIMK1P53667 RNA5SP67-201ENST00000516422 131 ntBASIC-0.12□□□□□ -2.43
LIMK1P53667 RNU6-426P-201ENST00000516464 97 ntBASIC-0.12□□□□□ -2.43
LIMK1P53667 MIR409-201ENST00000362237 79 ntBASIC-0.13□□□□□ -2.43
LIMK1P53667 MIR101-1-201ENST00000362265 75 ntBASIC-0.13□□□□□ -2.43
LIMK1P53667 RNU6-409P-201ENST00000384114 104 ntBASIC-0.13□□□□□ -2.43
LIMK1P53667 RNU6-243P-201ENST00000391140 107 ntBASIC-0.13□□□□□ -2.43
LIMK1P53667 RNA5SP484-201ENST00000458857 111 ntBASIC-0.13□□□□□ -2.43
LIMK1P53667 RNU7-159P-201ENST00000459284 62 ntBASIC-0.13□□□□□ -2.43
LIMK1P53667 RNU6-1234P-201ENST00000516877 103 ntBASIC-0.13□□□□□ -2.43
LIMK1P53667 MIR548AD-201ENST00000584780 82 ntBASIC-0.13□□□□□ -2.43
LIMK1P53667 RNU6-90P-201ENST00000606352 106 ntBASIC-0.13□□□□□ -2.43
LIMK1P53667 uc_338.28-201ENST00000612082 187 ntBASIC-0.13□□□□□ -2.43
LIMK1P53667 AC025166.1-201ENST00000612411 163 ntBASIC-0.13□□□□□ -2.43
LIMK1P53667 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.13□□□□□ -2.43
LIMK1P53667 RNU6-363P-201ENST00000362895 105 ntBASIC-0.14□□□□□ -2.43
LIMK1P53667 SNORA32.1-201ENST00000364514 115 ntBASIC-0.14□□□□□ -2.43
LIMK1P53667 Y_RNA.343-201ENST00000365354 112 ntBASIC-0.14□□□□□ -2.43
LIMK1P53667 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.14□□□□□ -2.43
LIMK1P53667 RNA5SP163-201ENST00000410304 99 ntBASIC-0.14□□□□□ -2.43
LIMK1P53667 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.15□□□□□ -2.43
LIMK1P53667 RNU6-756P-201ENST00000383997 107 ntBASIC-0.15□□□□□ -2.43
LIMK1P53667 snoU13.11-201ENST00000459219 104 ntBASIC-0.15□□□□□ -2.43
LIMK1P53667 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.15□□□□□ -2.43
LIMK1P53667 MIR4677-201ENST00000584153 80 ntBASIC-0.15□□□□□ -2.43
LIMK1P53667 AC084368.1-201ENST00000620935 65 ntBASIC-0.15□□□□□ -2.43
LIMK1P53667 RNU6-929P-201ENST00000384429 107 ntBASIC-0.16□□□□□ -2.44
LIMK1P53667 RPS29P8-201ENST00000445109 171 ntBASIC-0.16□□□□□ -2.44
LIMK1P53667 MIR1295B-201ENST00000636144 60 ntBASIC-0.16□□□□□ -2.44
LIMK1P53667 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.17□□□□□ -2.44
LIMK1P53667 MTND5P18-201ENST00000445624 1801 ntBASIC-0.17□□□□□ -2.44
LIMK1P53667 RNU6-161P-201ENST00000363051 106 ntBASIC-0.17□□□□□ -2.44
LIMK1P53667 SNORD38.1-201ENST00000363863 68 ntBASIC-0.17□□□□□ -2.44
LIMK1P53667 SNORD115-44-201ENST00000365391 82 ntBASIC-0.17□□□□□ -2.44
LIMK1P53667 RNU6-46P-201ENST00000383860 107 ntBASIC-0.17□□□□□ -2.44
LIMK1P53667 SNORA40-201ENST00000388090 126 ntBASIC-0.17□□□□□ -2.44
LIMK1P53667 MIR548G-201ENST00000408442 89 ntBASIC-0.17□□□□□ -2.44
LIMK1P53667 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.17□□□□□ -2.44
LIMK1P53667 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.18□□□□□ -2.44
LIMK1P53667 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.18□□□□□ -2.44
LIMK1P53667 SNORA75.1-201ENST00000391130 148 ntBASIC-0.18□□□□□ -2.44
LIMK1P53667 HMGN2P22-201ENST00000427588 175 ntBASIC-0.18□□□□□ -2.44
LIMK1P53667 SNORD114-28-201ENST00000363610 72 ntBASIC-0.19□□□□□ -2.44
LIMK1P53667 RNU1-141P-201ENST00000364623 158 ntBASIC-0.19□□□□□ -2.44
LIMK1P53667 SNORD58C-201ENST00000365223 64 ntBASIC-0.19□□□□□ -2.44
LIMK1P53667 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.19□□□□□ -2.44
LIMK1P53667 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.19□□□□□ -2.44
LIMK1P53667 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.19□□□□□ -2.44
LIMK1P53667 RNU6-816P-201ENST00000390914 107 ntBASIC-0.19□□□□□ -2.44
LIMK1P53667 RNU6-1268P-201ENST00000391214 107 ntBASIC-0.19□□□□□ -2.44
LIMK1P53667 RNU6-1239P-201ENST00000391310 107 ntBASIC-0.19□□□□□ -2.44
LIMK1P53667 RNA5SP451-201ENST00000410588 110 ntBASIC-0.19□□□□□ -2.44
LIMK1P53667 MTND4LP9-201ENST00000427694 174 ntBASIC-0.19□□□□□ -2.44
LIMK1P53667 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.19□□□□□ -2.44
LIMK1P53667 RNU6-1211P-201ENST00000459179 105 ntBASIC-0.19□□□□□ -2.44
LIMK1P53667 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.19□□□□□ -2.44
LIMK1P53667 MIR3925-201ENST00000584674 77 ntBASIC-0.19□□□□□ -2.44
LIMK1P53667 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.2□□□□□ -2.44
LIMK1P53667 MIR516B1-201ENST00000385211 90 ntBASIC-0.2□□□□□ -2.44
LIMK1P53667 RNU7-200P-201ENST00000516105 62 ntBASIC-0.2□□□□□ -2.44
LIMK1P53667 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.2□□□□□ -2.44
LIMK1P53667 RNU6-794P-201ENST00000517261 64 ntBASIC-0.2□□□□□ -2.44
LIMK1P53667 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.21□□□□□ -2.44
LIMK1P53667 Y_RNA.464-201ENST00000384282 110 ntBASIC-0.21□□□□□ -2.44
LIMK1P53667 MIR617-201ENST00000385030 97 ntBASIC-0.21□□□□□ -2.44
LIMK1P53667 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.21□□□□□ -2.44
LIMK1P53667 SNORA25.13-201ENST00000516395 103 ntBASIC-0.21□□□□□ -2.44
LIMK1P53667 SNORD49B-201ENST00000365172 72 ntBASIC-0.22□□□□□ -2.44
LIMK1P53667 RNU7-165P-201ENST00000458864 60 ntBASIC-0.22□□□□□ -2.44
LIMK1P53667 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.22□□□□□ -2.44
LIMK1P53667 AL442128.1-201ENST00000615151 90 ntBASIC-0.22□□□□□ -2.44
LIMK1P53667 TRDV1-202ENST00000621643 102 ntBASIC-0.22□□□□□ -2.44
LIMK1P53667 MIR6514-201ENST00000622549 70 ntBASIC-0.22□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 211.1 ms