Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 RNU6-726P-201ENST00000364680 107 ntBASIC0.3□□□□□ -2.36
LBX1P52954 RNU6-80P-201ENST00000384195 107 ntBASIC0.3□□□□□ -2.36
LBX1P52954 Y_RNA.525-201ENST00000384570 113 ntBASIC0.3□□□□□ -2.36
LBX1P52954 BX276092.1-201ENST00000427368 251 ntBASIC0.3□□□□□ -2.36
LBX1P52954 RNU6-659P-201ENST00000516454 104 ntBASIC0.3□□□□□ -2.36
LBX1P52954 AL162376.1-201ENST00000624117 175 ntBASIC0.3□□□□□ -2.36
LBX1P52954 MIR101-1-201ENST00000362265 75 ntBASIC0.29□□□□□ -2.36
LBX1P52954 RNU6-170P-201ENST00000362832 104 ntBASIC0.29□□□□□ -2.36
LBX1P52954 RNU6-1229P-201ENST00000364295 107 ntBASIC0.29□□□□□ -2.36
LBX1P52954 RNU6-302P-201ENST00000365249 107 ntBASIC0.29□□□□□ -2.36
LBX1P52954 Y_RNA.362-201ENST00000365518 110 ntBASIC0.29□□□□□ -2.36
LBX1P52954 RNU2-59P-201ENST00000410482 191 ntBASIC0.29□□□□□ -2.36
LBX1P52954 RNU6-848P-201ENST00000515948 107 ntBASIC0.29□□□□□ -2.36
LBX1P52954 RNU6-617P-201ENST00000516147 107 ntBASIC0.29□□□□□ -2.36
LBX1P52954 RNU6-473P-201ENST00000516164 107 ntBASIC0.29□□□□□ -2.36
LBX1P52954 RNU6-1265P-201ENST00000516342 103 ntBASIC0.29□□□□□ -2.36
LBX1P52954 RNU6-1049P-201ENST00000516414 107 ntBASIC0.29□□□□□ -2.36
LBX1P52954 RNU6-1018P-201ENST00000516577 106 ntBASIC0.29□□□□□ -2.36
LBX1P52954 MIR4679-2-201ENST00000578358 77 ntBASIC0.29□□□□□ -2.36
LBX1P52954 MIR4500-201ENST00000579472 76 ntBASIC0.29□□□□□ -2.36
LBX1P52954 SNORD115-24-201ENST00000363528 82 ntBASIC0.28□□□□□ -2.36
LBX1P52954 RNY4P6-201ENST00000363667 96 ntBASIC0.28□□□□□ -2.36
LBX1P52954 RNU6-187P-201ENST00000384139 106 ntBASIC0.28□□□□□ -2.36
LBX1P52954 SNORD41.1-201ENST00000391000 69 ntBASIC0.28□□□□□ -2.36
LBX1P52954 RNU6-1061P-201ENST00000516530 99 ntBASIC0.28□□□□□ -2.36
LBX1P52954 AL035470.1-201ENST00000622571 220 ntBASIC0.28□□□□□ -2.36
LBX1P52954 RNU6-1260P-201ENST00000362944 107 ntBASIC0.27□□□□□ -2.37
LBX1P52954 RNU4-32P-201ENST00000363404 141 ntBASIC0.27□□□□□ -2.37
LBX1P52954 Y_RNA.346-201ENST00000365385 112 ntBASIC0.27□□□□□ -2.37
LBX1P52954 MIR224-201ENST00000384889 81 ntBASIC0.27□□□□□ -2.37
LBX1P52954 SNORD63B-201ENST00000411005 70 ntBASIC0.27□□□□□ -2.37
LBX1P52954 RNA5SP227-201ENST00000516184 113 ntBASIC0.27□□□□□ -2.37
LBX1P52954 AL157777.2-201ENST00000258070 137 ntBASIC0.26□□□□□ -2.37
LBX1P52954 RNU6-774P-201ENST00000363238 107 ntBASIC0.26□□□□□ -2.37
LBX1P52954 Y_RNA.247-201ENST00000364500 92 ntBASIC0.26□□□□□ -2.37
LBX1P52954 Y_RNA.377-201ENST00000365644 108 ntBASIC0.26□□□□□ -2.37
LBX1P52954 RNU6-1201P-201ENST00000384227 107 ntBASIC0.26□□□□□ -2.37
LBX1P52954 MIR635-201ENST00000384830 98 ntBASIC0.26□□□□□ -2.37
LBX1P52954 MIR599-201ENST00000385069 95 ntBASIC0.26□□□□□ -2.37
LBX1P52954 AC069271.1-201ENST00000445577 156 ntBASIC0.26□□□□□ -2.37
LBX1P52954 RNU6-850P-201ENST00000516934 103 ntBASIC0.26□□□□□ -2.37
LBX1P52954 AL162726.3-218ENST00000636401 95 ntBASIC0.26□□□□□ -2.37
LBX1P52954 Y_RNA.71-201ENST00000362892 104 ntBASIC0.25□□□□□ -2.37
LBX1P52954 SNORD116-14-201ENST00000383894 92 ntBASIC0.25□□□□□ -2.37
LBX1P52954 SNORD116-17-201ENST00000383929 92 ntBASIC0.25□□□□□ -2.37
LBX1P52954 SNORD116-15-201ENST00000384445 92 ntBASIC0.25□□□□□ -2.37
LBX1P52954 Y_RNA.563-201ENST00000384707 108 ntBASIC0.25□□□□□ -2.37
LBX1P52954 SNORD116-19-201ENST00000384729 92 ntBASIC0.25□□□□□ -2.37
LBX1P52954 MIR759-201ENST00000390224 91 ntBASIC0.25□□□□□ -2.37
LBX1P52954 RNU6-1211P-201ENST00000459179 105 ntBASIC0.25□□□□□ -2.37
LBX1P52954 SNORD33.1-201ENST00000516213 88 ntBASIC0.25□□□□□ -2.37
LBX1P52954 MIR548AX-201ENST00000580117 73 ntBASIC0.25□□□□□ -2.37
LBX1P52954 Y_RNA.353-201ENST00000365440 108 ntBASIC0.24□□□□□ -2.37
LBX1P52954 RPL39P34-201ENST00000477141 156 ntBASIC0.24□□□□□ -2.37
LBX1P52954 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.24□□□□□ -2.37
LBX1P52954 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC0.24□□□□□ -2.37
LBX1P52954 Y_RNA.49-201ENST00000362714 112 ntBASIC0.23□□□□□ -2.37
LBX1P52954 RNU6-1099P-201ENST00000363533 107 ntBASIC0.23□□□□□ -2.37
LBX1P52954 Y_RNA.173-201ENST00000363776 113 ntBASIC0.23□□□□□ -2.37
LBX1P52954 SNORD38.1-201ENST00000363863 68 ntBASIC0.23□□□□□ -2.37
LBX1P52954 Y_RNA.342-201ENST00000365352 113 ntBASIC0.23□□□□□ -2.37
LBX1P52954 RNU6-81P-201ENST00000365608 104 ntBASIC0.23□□□□□ -2.37
LBX1P52954 RNU6V-201ENST00000384105 107 ntBASIC0.23□□□□□ -2.37
LBX1P52954 RNU7-195P-201ENST00000458793 62 ntBASIC0.23□□□□□ -2.37
LBX1P52954 RNU7-106P-201ENST00000459514 67 ntBASIC0.23□□□□□ -2.37
LBX1P52954 AC069113.3-201ENST00000521019 150 ntBASIC0.23□□□□□ -2.37
LBX1P52954 SNORA42.1-201ENST00000363515 137 ntBASIC0.22□□□□□ -2.37
LBX1P52954 RNU6-815P-201ENST00000384080 113 ntBASIC0.22□□□□□ -2.37
LBX1P52954 SNORD38.2-201ENST00000384470 69 ntBASIC0.22□□□□□ -2.37
LBX1P52954 RNU6-816P-201ENST00000390914 107 ntBASIC0.22□□□□□ -2.37
LBX1P52954 RNU6-1268P-201ENST00000391214 107 ntBASIC0.22□□□□□ -2.37
LBX1P52954 RNU6-1239P-201ENST00000391310 107 ntBASIC0.22□□□□□ -2.37
LBX1P52954 SNORA7.5-201ENST00000410672 110 ntBASIC0.22□□□□□ -2.37
LBX1P52954 HMGN2P22-201ENST00000427588 175 ntBASIC0.22□□□□□ -2.37
LBX1P52954 RNU7-104P-201ENST00000459398 79 ntBASIC0.22□□□□□ -2.37
LBX1P52954 Y_RNA.659-201ENST00000515994 113 ntBASIC0.22□□□□□ -2.37
LBX1P52954 U6.95-201ENST00000636931 70 ntBASIC0.22□□□□□ -2.37
LBX1P52954 MIR198-201ENST00000637333 62 ntBASIC0.22□□□□□ -2.37
LBX1P52954 SNORD114-3-201ENST00000364969 75 ntBASIC0.21□□□□□ -2.38
LBX1P52954 Y_RNA.323-201ENST00000365157 109 ntBASIC0.21□□□□□ -2.38
LBX1P52954 RNU6-409P-201ENST00000384114 104 ntBASIC0.21□□□□□ -2.38
LBX1P52954 Y_RNA.809-201ENST00000516058 95 ntBASIC0.21□□□□□ -2.38
LBX1P52954 MIR4645-201ENST00000583158 77 ntBASIC0.21□□□□□ -2.38
LBX1P52954 Y_RNA.507-201ENST00000384500 99 ntBASIC0.2□□□□□ -2.38
LBX1P52954 MIR577-201ENST00000385196 96 ntBASIC0.2□□□□□ -2.38
LBX1P52954 AC007012.1-201ENST00000567192 175 ntBASIC0.2□□□□□ -2.38
LBX1P52954 MIR3920-201ENST00000581751 86 ntBASIC0.2□□□□□ -2.38
LBX1P52954 MIR5093-201ENST00000583199 100 ntBASIC0.2□□□□□ -2.38
LBX1P52954 AL442128.1-201ENST00000615151 90 ntBASIC0.2□□□□□ -2.38
LBX1P52954 RNU6-959P-201ENST00000384671 107 ntBASIC0.19□□□□□ -2.38
LBX1P52954 MIR548G-201ENST00000408442 89 ntBASIC0.19□□□□□ -2.38
LBX1P52954 RNA5SP451-201ENST00000410588 110 ntBASIC0.19□□□□□ -2.38
LBX1P52954 AC073261.1-201ENST00000429409 121 ntBASIC0.19□□□□□ -2.38
LBX1P52954 Y_RNA.684-201ENST00000516510 99 ntBASIC0.19□□□□□ -2.38
LBX1P52954 MIR4694-201ENST00000578534 80 ntBASIC0.19□□□□□ -2.38
LBX1P52954 MIR4752-201ENST00000579672 72 ntBASIC0.19□□□□□ -2.38
LBX1P52954 uc_338.28-201ENST00000612082 187 ntBASIC0.19□□□□□ -2.38
LBX1P52954 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.19□□□□□ -2.38
LBX1P52954 MIR4315-1-201ENST00000636800 73 ntBASIC0.19□□□□□ -2.38
LBX1P52954 MIR4315-2-201ENST00000640925 73 ntBASIC0.19□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 200.5 ms