Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 SNORD124-201ENST00000459577 104 ntBASIC1.02□□□□□ -2.25
MMP13P45452 RNU6-977P-201ENST00000516411 103 ntBASIC1.02□□□□□ -2.25
MMP13P45452 MIRLET7F1-201ENST00000362202 87 ntBASIC1.01□□□□□ -2.25
MMP13P45452 Y_RNA.32-201ENST00000362589 110 ntBASIC1.01□□□□□ -2.25
MMP13P45452 Y_RNA.437-201ENST00000384113 113 ntBASIC1.01□□□□□ -2.25
MMP13P45452 RNU6-364P-201ENST00000384387 107 ntBASIC1.01□□□□□ -2.25
MMP13P45452 RNU6-535P-201ENST00000384722 107 ntBASIC1.01□□□□□ -2.25
MMP13P45452 MIR519C-201ENST00000385053 87 ntBASIC1.01□□□□□ -2.25
MMP13P45452 MIR100-201ENST00000385259 80 ntBASIC1.01□□□□□ -2.25
MMP13P45452 RNU6-243P-201ENST00000391140 107 ntBASIC1.01□□□□□ -2.25
MMP13P45452 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
MMP13P45452 MIR520F-201ENST00000384824 87 ntBASIC1□□□□□ -2.25
MMP13P45452 Y_RNA.809-201ENST00000516058 95 ntBASIC1□□□□□ -2.25
MMP13P45452 SNORA31.14-201ENST00000516728 116 ntBASIC1□□□□□ -2.25
MMP13P45452 AC140658.3-201ENST00000567603 271 ntBASIC1□□□□□ -2.25
MMP13P45452 uc_338.16-201ENST00000621804 95 ntBASIC1□□□□□ -2.25
MMP13P45452 U6.100-201ENST00000636230 99 ntBASIC1□□□□□ -2.25
MMP13P45452 RNU6-1260P-201ENST00000362944 107 ntBASIC0.99□□□□□ -2.25
MMP13P45452 RNU6-242P-201ENST00000384359 107 ntBASIC0.99□□□□□ -2.25
MMP13P45452 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.99□□□□□ -2.25
MMP13P45452 MIR548H5-201ENST00000580314 60 ntBASIC0.99□□□□□ -2.25
MMP13P45452 MIR3064-201ENST00000581130 66 ntBASIC0.99□□□□□ -2.25
MMP13P45452 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.99□□□□□ -2.25
MMP13P45452 TRDV1-202ENST00000621643 102 ntBASIC0.99□□□□□ -2.25
MMP13P45452 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.99□□□□□ -2.25
MMP13P45452 MIR1-1-201ENST00000362147 71 ntBASIC0.98□□□□□ -2.25
MMP13P45452 MIR337-201ENST00000362281 93 ntBASIC0.98□□□□□ -2.25
MMP13P45452 Y_RNA.316-201ENST00000365118 111 ntBASIC0.98□□□□□ -2.25
MMP13P45452 RNU6-652P-201ENST00000365488 107 ntBASIC0.98□□□□□ -2.25
MMP13P45452 Y_RNA.426-201ENST00000384068 113 ntBASIC0.98□□□□□ -2.25
MMP13P45452 Y_RNA.508-201ENST00000384502 114 ntBASIC0.98□□□□□ -2.25
MMP13P45452 MIR599-201ENST00000385069 95 ntBASIC0.98□□□□□ -2.25
MMP13P45452 SNORD89-201ENST00000390981 114 ntBASIC0.98□□□□□ -2.25
MMP13P45452 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.98□□□□□ -2.25
MMP13P45452 SNORA25.13-201ENST00000516395 103 ntBASIC0.98□□□□□ -2.25
MMP13P45452 Y_RNA.685-201ENST00000516532 108 ntBASIC0.98□□□□□ -2.25
MMP13P45452 MIR4536-1-201ENST00000583537 88 ntBASIC0.98□□□□□ -2.25
MMP13P45452 Y_RNA.94-201ENST00000363068 106 ntBASIC0.97□□□□□ -2.25
MMP13P45452 MIR520H-201ENST00000385126 88 ntBASIC0.97□□□□□ -2.25
MMP13P45452 RNU1-119P-201ENST00000391122 165 ntBASIC0.97□□□□□ -2.25
MMP13P45452 Y_RNA.607-201ENST00000410597 98 ntBASIC0.97□□□□□ -2.25
MMP13P45452 AC097635.1-201ENST00000450678 155 ntBASIC0.97□□□□□ -2.25
MMP13P45452 AC093729.1-201ENST00000513074 128 ntBASIC0.97□□□□□ -2.25
MMP13P45452 RNU6-1265P-201ENST00000516342 103 ntBASIC0.97□□□□□ -2.25
MMP13P45452 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.97□□□□□ -2.25
MMP13P45452 SNORD114-27-201ENST00000363766 70 ntBASIC0.96□□□□□ -2.26
MMP13P45452 RNU6-478P-201ENST00000363904 110 ntBASIC0.96□□□□□ -2.26
MMP13P45452 Y_RNA.221-201ENST00000364248 96 ntBASIC0.96□□□□□ -2.26
MMP13P45452 RNU6-811P-201ENST00000384069 107 ntBASIC0.96□□□□□ -2.26
MMP13P45452 AL450471.1-201ENST00000447509 127 ntBASIC0.96□□□□□ -2.26
MMP13P45452 AC244505.6-201ENST00000452829 130 ntBASIC0.96□□□□□ -2.26
MMP13P45452 SNORA18.5-201ENST00000516616 101 ntBASIC0.96□□□□□ -2.26
MMP13P45452 MIR4661-201ENST00000582720 75 ntBASIC0.96□□□□□ -2.26
MMP13P45452 AC104996.3-201ENST00000590718 94 ntBASIC0.96□□□□□ -2.26
MMP13P45452 MIR3202-2-201ENST00000635980 79 ntBASIC0.96□□□□□ -2.26
MMP13P45452 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
MMP13P45452 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
MMP13P45452 RNU6-1187P-201ENST00000364771 110 ntBASIC0.95□□□□□ -2.26
MMP13P45452 MIR518E-201ENST00000385252 88 ntBASIC0.95□□□□□ -2.26
MMP13P45452 RNU6-466P-201ENST00000391224 103 ntBASIC0.95□□□□□ -2.26
MMP13P45452 MIR1236-201ENST00000408340 102 ntBASIC0.95□□□□□ -2.26
MMP13P45452 RNU6-65P-201ENST00000516332 98 ntBASIC0.95□□□□□ -2.26
MMP13P45452 AC138907.6-201ENST00000568401 126 ntBASIC0.95□□□□□ -2.26
MMP13P45452 AC138869.1-201ENST00000568623 124 ntBASIC0.95□□□□□ -2.26
MMP13P45452 MTRNR2L2-201ENST00000604882 87 ntBASIC0.95□□□□□ -2.26
MMP13P45452 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
MMP13P45452 MIR644A-201ENST00000385262 94 ntBASIC0.94□□□□□ -2.26
MMP13P45452 RNU6-279P-201ENST00000391297 101 ntBASIC0.94□□□□□ -2.26
MMP13P45452 AC002350.1-201ENST00000490759 375 ntBASIC0.94□□□□□ -2.26
MMP13P45452 RNU6-638P-201ENST00000516582 104 ntBASIC0.94□□□□□ -2.26
MMP13P45452 RNA5SP102-201ENST00000516865 106 ntBASIC0.94□□□□□ -2.26
MMP13P45452 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC0.94□□□□□ -2.26
MMP13P45452 MIR4796-201ENST00000580742 81 ntBASIC0.94□□□□□ -2.26
MMP13P45452 MIR4696-201ENST00000581431 70 ntBASIC0.94□□□□□ -2.26
MMP13P45452 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
MMP13P45452 RNU6-624P-201ENST00000363411 107 ntBASIC0.93□□□□□ -2.26
MMP13P45452 MIR200A-201ENST00000384875 90 ntBASIC0.93□□□□□ -2.26
MMP13P45452 MIR532-201ENST00000385025 91 ntBASIC0.93□□□□□ -2.26
MMP13P45452 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
MMP13P45452 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.93□□□□□ -2.26
MMP13P45452 RNU7-161P-201ENST00000517289 62 ntBASIC0.93□□□□□ -2.26
MMP13P45452 MIR4712-201ENST00000583750 82 ntBASIC0.93□□□□□ -2.26
MMP13P45452 RNU7-10P-201ENST00000607194 63 ntBASIC0.93□□□□□ -2.26
MMP13P45452 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.93□□□□□ -2.26
MMP13P45452 SNORD114-24-201ENST00000365029 72 ntBASIC0.92□□□□□ -2.26
MMP13P45452 Y_RNA.491-201ENST00000384417 107 ntBASIC0.92□□□□□ -2.26
MMP13P45452 SNORD105-201ENST00000386910 85 ntBASIC0.92□□□□□ -2.26
MMP13P45452 RNU6-857P-201ENST00000515893 110 ntBASIC0.92□□□□□ -2.26
MMP13P45452 RNU6-1110P-201ENST00000516462 101 ntBASIC0.92□□□□□ -2.26
MMP13P45452 MIR548AG2-201ENST00000581228 64 ntBASIC0.92□□□□□ -2.26
MMP13P45452 AL136317.1-201ENST00000612653 226 ntBASIC0.92□□□□□ -2.26
MMP13P45452 RNU6-664P-201ENST00000362381 107 ntBASIC0.91□□□□□ -2.26
MMP13P45452 RNA5SP403-201ENST00000363598 108 ntBASIC0.91□□□□□ -2.26
MMP13P45452 MIR942-201ENST00000401111 86 ntBASIC0.91□□□□□ -2.26
MMP13P45452 AC067940.1-201ENST00000458411 300 ntBASIC0.91□□□□□ -2.26
MMP13P45452 snoU13.17-201ENST00000458802 104 ntBASIC0.91□□□□□ -2.26
MMP13P45452 MIR3140-201ENST00000583685 90 ntBASIC0.91□□□□□ -2.26
MMP13P45452 MIR96-201ENST00000362288 78 ntBASIC0.9□□□□□ -2.27
MMP13P45452 Y_RNA.532-201ENST00000384590 113 ntBASIC0.9□□□□□ -2.27
MMP13P45452 U7.7-201ENST00000459276 60 ntBASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 182.8 ms