Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 RNA5SP264-201ENST00000363115 107 ntBASIC2.01□□□□□ -2.09
CHRNA4P43681 Y_RNA.338-201ENST00000365320 114 ntBASIC2.01□□□□□ -2.09
CHRNA4P43681 RNA5SP299-201ENST00000391203 116 ntBASIC2□□□□□ -2.09
CHRNA4P43681 JTBP1-201ENST00000441314 247 ntBASIC2□□□□□ -2.09
CHRNA4P43681 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC2□□□□□ -2.09
CHRNA4P43681 RNU1-40P-201ENST00000516816 164 ntBASIC2□□□□□ -2.09
CHRNA4P43681 RNU1-97P-201ENST00000516872 164 ntBASIC2□□□□□ -2.09
CHRNA4P43681 IGLVVI-22-1-201ENST00000521183 211 ntBASIC2□□□□□ -2.09
CHRNA4P43681 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2□□□□□ -2.09
CHRNA4P43681 MIR4287-201ENST00000579398 78 ntBASIC2□□□□□ -2.09
CHRNA4P43681 MIR6509-201ENST00000614603 85 ntBASIC2□□□□□ -2.09
CHRNA4P43681 RNU6-645P-201ENST00000364649 106 ntBASIC1.99□□□□□ -2.09
CHRNA4P43681 RNA5SP37-201ENST00000365420 130 ntBASIC1.99□□□□□ -2.09
CHRNA4P43681 RNA5SP215-201ENST00000363440 122 ntBASIC1.98□□□□□ -2.09
CHRNA4P43681 AC244505.6-201ENST00000452829 130 ntBASIC1.98□□□□□ -2.09
CHRNA4P43681 snoU13.21-201ENST00000459368 105 ntBASIC1.98□□□□□ -2.09
CHRNA4P43681 AC079804.2-201ENST00000490376 200 ntBASIC1.98□□□□□ -2.09
CHRNA4P43681 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.98□□□□□ -2.09
CHRNA4P43681 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.98□□□□□ -2.09
CHRNA4P43681 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
CHRNA4P43681 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CHRNA4P43681 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
CHRNA4P43681 Y_RNA.164-201ENST00000363709 102 ntBASIC1.97□□□□□ -2.09
CHRNA4P43681 RNA5SP245-201ENST00000364239 121 ntBASIC1.97□□□□□ -2.09
CHRNA4P43681 RNU4-52P-201ENST00000384209 138 ntBASIC1.97□□□□□ -2.09
CHRNA4P43681 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CHRNA4P43681 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.97□□□□□ -2.09
CHRNA4P43681 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
CHRNA4P43681 MIR676-201ENST00000390702 67 ntBASIC1.96□□□□□ -2.1
CHRNA4P43681 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.96□□□□□ -2.1
CHRNA4P43681 HMGN2P23-201ENST00000456759 269 ntBASIC1.96□□□□□ -2.1
CHRNA4P43681 RNU6-947P-201ENST00000516264 106 ntBASIC1.96□□□□□ -2.1
CHRNA4P43681 NAMPTP3-201ENST00000569273 224 ntBASIC1.96□□□□□ -2.1
CHRNA4P43681 AL645939.4-201ENST00000604495 135 ntBASIC1.96□□□□□ -2.1
CHRNA4P43681 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.96□□□□□ -2.1
CHRNA4P43681 RNU6-535P-201ENST00000384722 107 ntBASIC1.95□□□□□ -2.1
CHRNA4P43681 MIR203A-201ENST00000384836 110 ntBASIC1.95□□□□□ -2.1
CHRNA4P43681 MIR125B2-201ENST00000385128 89 ntBASIC1.95□□□□□ -2.1
CHRNA4P43681 MIR216B-201ENST00000390186 82 ntBASIC1.95□□□□□ -2.1
CHRNA4P43681 RNU4-88P-201ENST00000411220 86 ntBASIC1.95□□□□□ -2.1
CHRNA4P43681 HMGN2P38-201ENST00000423806 265 ntBASIC1.95□□□□□ -2.1
CHRNA4P43681 RNA5SP233-201ENST00000459153 113 ntBASIC1.95□□□□□ -2.1
CHRNA4P43681 MIR3657-201ENST00000584818 117 ntBASIC1.95□□□□□ -2.1
CHRNA4P43681 RNU6-92P-201ENST00000605893 104 ntBASIC1.95□□□□□ -2.1
CHRNA4P43681 MIR7-2-201ENST00000384970 110 ntBASIC1.94□□□□□ -2.1
CHRNA4P43681 SUMO2P12-201ENST00000405924 140 ntBASIC1.94□□□□□ -2.1
CHRNA4P43681 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.94□□□□□ -2.1
CHRNA4P43681 SNORD83.1-201ENST00000411362 77 ntBASIC1.94□□□□□ -2.1
CHRNA4P43681 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
CHRNA4P43681 Y_RNA.226-201ENST00000364337 114 ntBASIC1.93□□□□□ -2.1
CHRNA4P43681 RNU6-1126P-201ENST00000384002 107 ntBASIC1.93□□□□□ -2.1
CHRNA4P43681 AC003989.2-201ENST00000440224 169 ntBASIC1.93□□□□□ -2.1
CHRNA4P43681 AC008608.1-201ENST00000603910 127 ntBASIC1.93□□□□□ -2.1
CHRNA4P43681 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.93□□□□□ -2.1
CHRNA4P43681 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
CHRNA4P43681 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
CHRNA4P43681 Y_RNA.379-201ENST00000365653 102 ntBASIC1.92□□□□□ -2.1
CHRNA4P43681 RNU7-13P-201ENST00000516413 62 ntBASIC1.92□□□□□ -2.1
CHRNA4P43681 MIR548AG2-201ENST00000581228 64 ntBASIC1.92□□□□□ -2.1
CHRNA4P43681 MIR7111-201ENST00000619751 72 ntBASIC1.92□□□□□ -2.1
CHRNA4P43681 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CHRNA4P43681 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
CHRNA4P43681 SNORD60.1-201ENST00000362451 73 ntBASIC1.91□□□□□ -2.1
CHRNA4P43681 RNA5SP276-201ENST00000362580 94 ntBASIC1.91□□□□□ -2.1
CHRNA4P43681 RNU6-302P-201ENST00000365249 107 ntBASIC1.91□□□□□ -2.1
CHRNA4P43681 SNORA75.1-201ENST00000391130 148 ntBASIC1.91□□□□□ -2.1
CHRNA4P43681 HMGN2P19-201ENST00000425149 265 ntBASIC1.91□□□□□ -2.1
CHRNA4P43681 RNU6-656P-201ENST00000516785 107 ntBASIC1.91□□□□□ -2.1
CHRNA4P43681 MIR548O2-201ENST00000616090 70 ntBASIC1.91□□□□□ -2.1
CHRNA4P43681 SNORA2.1-201ENST00000363089 137 ntBASIC1.9□□□□□ -2.11
CHRNA4P43681 RNU6-934P-201ENST00000365154 107 ntBASIC1.9□□□□□ -2.11
CHRNA4P43681 RNU6-260P-201ENST00000384092 107 ntBASIC1.9□□□□□ -2.11
CHRNA4P43681 RNU6-439P-201ENST00000384188 106 ntBASIC1.9□□□□□ -2.11
CHRNA4P43681 RNU6-1053P-201ENST00000515930 101 ntBASIC1.9□□□□□ -2.11
CHRNA4P43681 RNU6-1089P-201ENST00000516473 104 ntBASIC1.9□□□□□ -2.11
CHRNA4P43681 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
CHRNA4P43681 SNORA26.9-201ENST00000391322 122 ntBASIC1.89□□□□□ -2.11
CHRNA4P43681 MIR1287-201ENST00000408492 90 ntBASIC1.89□□□□□ -2.11
CHRNA4P43681 MIR4771-2-201ENST00000577758 74 ntBASIC1.89□□□□□ -2.11
CHRNA4P43681 MIR4771-1-201ENST00000582617 74 ntBASIC1.89□□□□□ -2.11
CHRNA4P43681 AL096840.1-201ENST00000603287 93 ntBASIC1.89□□□□□ -2.11
CHRNA4P43681 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.89□□□□□ -2.11
CHRNA4P43681 RNU6-1312P-201ENST00000362425 108 ntBASIC1.88□□□□□ -2.11
CHRNA4P43681 SNORD113.3-201ENST00000364630 78 ntBASIC1.88□□□□□ -2.11
CHRNA4P43681 RNA5SP212-201ENST00000391223 107 ntBASIC1.88□□□□□ -2.11
CHRNA4P43681 RNU6-295P-201ENST00000516901 104 ntBASIC1.88□□□□□ -2.11
CHRNA4P43681 RNA5SP364-201ENST00000516938 78 ntBASIC1.88□□□□□ -2.11
CHRNA4P43681 SNORA77B-201ENST00000578179 125 ntBASIC1.88□□□□□ -2.11
CHRNA4P43681 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
CHRNA4P43681 RNA5SP403-201ENST00000363598 108 ntBASIC1.87□□□□□ -2.11
CHRNA4P43681 RNU6-54P-201ENST00000365563 107 ntBASIC1.87□□□□□ -2.11
CHRNA4P43681 MIR617-201ENST00000385030 97 ntBASIC1.87□□□□□ -2.11
CHRNA4P43681 MIR4498-201ENST00000577599 66 ntBASIC1.87□□□□□ -2.11
CHRNA4P43681 MIR4448-201ENST00000584360 86 ntBASIC1.87□□□□□ -2.11
CHRNA4P43681 MIR6739-201ENST00000622461 75 ntBASIC1.87□□□□□ -2.11
CHRNA4P43681 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.86□□□□□ -2.11
CHRNA4P43681 RNA5SP489-201ENST00000410986 109 ntBASIC1.86□□□□□ -2.11
CHRNA4P43681 SNORA40.17-201ENST00000517256 115 ntBASIC1.86□□□□□ -2.11
CHRNA4P43681 MIR4299-201ENST00000577899 72 ntBASIC1.86□□□□□ -2.11
CHRNA4P43681 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 251 ms