Protein–RNA interactions for Protein: P43489

TNFRSF4, Tumor necrosis factor receptor superfamily member 4, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4P43489 SNORD50.2-201ENST00000365465 70 ntBASIC0.11□□□□□ -2.39
TNFRSF4P43489 RNU6-1201P-201ENST00000384227 107 ntBASIC0.11□□□□□ -2.39
TNFRSF4P43489 SNORD41.1-201ENST00000391000 69 ntBASIC0.11□□□□□ -2.39
TNFRSF4P43489 RNU6-269P-201ENST00000391077 97 ntBASIC0.11□□□□□ -2.39
TNFRSF4P43489 AL353813.1-201ENST00000440700 253 ntBASIC0.11□□□□□ -2.39
TNFRSF4P43489 SNORD33.1-201ENST00000516213 88 ntBASIC0.11□□□□□ -2.39
TNFRSF4P43489 RNU6-1265P-201ENST00000516342 103 ntBASIC0.11□□□□□ -2.39
TNFRSF4P43489 RNU6-1006P-201ENST00000516998 103 ntBASIC0.11□□□□□ -2.39
TNFRSF4P43489 AL035470.1-201ENST00000622571 220 ntBASIC0.11□□□□□ -2.39
TNFRSF4P43489 AL162376.1-201ENST00000624117 175 ntBASIC0.11□□□□□ -2.39
TNFRSF4P43489 MIR3914-2-201ENST00000637339 95 ntBASIC0.11□□□□□ -2.39
TNFRSF4P43489 Y_RNA.71-201ENST00000362892 104 ntBASIC0.1□□□□□ -2.39
TNFRSF4P43489 RNU6-704P-201ENST00000364162 103 ntBASIC0.1□□□□□ -2.39
TNFRSF4P43489 Y_RNA.323-201ENST00000365157 109 ntBASIC0.1□□□□□ -2.39
TNFRSF4P43489 Y_RNA.433-201ENST00000384089 102 ntBASIC0.1□□□□□ -2.39
TNFRSF4P43489 MIR548A1-201ENST00000385041 97 ntBASIC0.1□□□□□ -2.39
TNFRSF4P43489 MIR548A3-201ENST00000385297 97 ntBASIC0.1□□□□□ -2.39
TNFRSF4P43489 RNU6-243P-201ENST00000391140 107 ntBASIC0.1□□□□□ -2.39
TNFRSF4P43489 RNU6-1254P-201ENST00000391266 104 ntBASIC0.1□□□□□ -2.39
TNFRSF4P43489 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.1□□□□□ -2.39
TNFRSF4P43489 Y_RNA.712-201ENST00000517011 92 ntBASIC0.1□□□□□ -2.39
TNFRSF4P43489 MIR5190-201ENST00000581537 80 ntBASIC0.1□□□□□ -2.39
TNFRSF4P43489 AC096720.1-201ENST00000604441 183 ntBASIC0.1□□□□□ -2.39
TNFRSF4P43489 SNORA70.25-201ENST00000612741 95 ntBASIC0.1□□□□□ -2.39
TNFRSF4P43489 AL442128.1-201ENST00000615151 90 ntBASIC0.1□□□□□ -2.39
TNFRSF4P43489 MIR499B-201ENST00000636498 73 ntBASIC0.1□□□□□ -2.39
TNFRSF4P43489 U6.95-201ENST00000636931 70 ntBASIC0.1□□□□□ -2.39
TNFRSF4P43489 AC073869.9-201ENST00000641610 120 ntBASIC0.1□□□□□ -2.39
TNFRSF4P43489 MIR643-201ENST00000385267 97 ntBASIC0.09□□□□□ -2.4
TNFRSF4P43489 RNU6-848P-201ENST00000515948 107 ntBASIC0.09□□□□□ -2.4
TNFRSF4P43489 RNU6-617P-201ENST00000516147 107 ntBASIC0.09□□□□□ -2.4
TNFRSF4P43489 RNU6-473P-201ENST00000516164 107 ntBASIC0.09□□□□□ -2.4
TNFRSF4P43489 RNU6-1049P-201ENST00000516414 107 ntBASIC0.09□□□□□ -2.4
TNFRSF4P43489 RNU6-509P-201ENST00000363519 107 ntBASIC0.08□□□□□ -2.4
TNFRSF4P43489 Y_RNA.549-201ENST00000384657 102 ntBASIC0.08□□□□□ -2.4
TNFRSF4P43489 RNU6-127P-201ENST00000390897 107 ntBASIC0.08□□□□□ -2.4
TNFRSF4P43489 MIR548M-201ENST00000408260 86 ntBASIC0.08□□□□□ -2.4
TNFRSF4P43489 RNU6-1232P-201ENST00000516299 86 ntBASIC0.08□□□□□ -2.4
TNFRSF4P43489 RNU6-659P-201ENST00000516454 104 ntBASIC0.08□□□□□ -2.4
TNFRSF4P43489 MIR4679-2-201ENST00000578358 77 ntBASIC0.08□□□□□ -2.4
TNFRSF4P43489 MIR4768-201ENST00000585270 74 ntBASIC0.08□□□□□ -2.4
TNFRSF4P43489 AL670379.3-201ENST00000605040 251 ntBASIC0.08□□□□□ -2.4
TNFRSF4P43489 RNU1-29P-201ENST00000606574 126 ntBASIC0.08□□□□□ -2.4
TNFRSF4P43489 U7.6-201ENST00000610841 64 ntBASIC0.08□□□□□ -2.4
TNFRSF4P43489 Y_RNA.173-201ENST00000363776 113 ntBASIC0.07□□□□□ -2.4
TNFRSF4P43489 SNORD116-14-201ENST00000383894 92 ntBASIC0.07□□□□□ -2.4
TNFRSF4P43489 SNORD116-17-201ENST00000383929 92 ntBASIC0.07□□□□□ -2.4
TNFRSF4P43489 SNORD116-15-201ENST00000384445 92 ntBASIC0.07□□□□□ -2.4
TNFRSF4P43489 SNORD116-19-201ENST00000384729 92 ntBASIC0.07□□□□□ -2.4
TNFRSF4P43489 AC006210.1-201ENST00000424882 111 ntBASIC0.07□□□□□ -2.4
TNFRSF4P43489 RNU7-74P-201ENST00000459104 62 ntBASIC0.07□□□□□ -2.4
TNFRSF4P43489 NAMPTP3-201ENST00000569273 224 ntBASIC0.07□□□□□ -2.4
TNFRSF4P43489 MIR3920-201ENST00000581751 86 ntBASIC0.07□□□□□ -2.4
TNFRSF4P43489 AC104408.1-201ENST00000605241 170 ntBASIC0.07□□□□□ -2.4
TNFRSF4P43489 RNA5SP214-201ENST00000363378 118 ntBASIC0.06□□□□□ -2.4
TNFRSF4P43489 MIR610-201ENST00000385139 96 ntBASIC0.06□□□□□ -2.4
TNFRSF4P43489 MIR577-201ENST00000385196 96 ntBASIC0.06□□□□□ -2.4
TNFRSF4P43489 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.06□□□□□ -2.4
TNFRSF4P43489 RNA5SP484-201ENST00000458857 111 ntBASIC0.06□□□□□ -2.4
TNFRSF4P43489 Y_RNA.659-201ENST00000515994 113 ntBASIC0.06□□□□□ -2.4
TNFRSF4P43489 RNU6-1333P-201ENST00000516162 93 ntBASIC0.06□□□□□ -2.4
TNFRSF4P43489 RNA5SP285-201ENST00000516619 119 ntBASIC0.06□□□□□ -2.4
TNFRSF4P43489 MIR5706-201ENST00000579841 80 ntBASIC0.06□□□□□ -2.4
TNFRSF4P43489 TRDV1-202ENST00000621643 102 ntBASIC0.06□□□□□ -2.4
TNFRSF4P43489 SNORD36A-201ENST00000362874 73 ntBASIC0.05□□□□□ -2.4
TNFRSF4P43489 SNORA42.1-201ENST00000363515 137 ntBASIC0.05□□□□□ -2.4
TNFRSF4P43489 RNU6-1163P-201ENST00000364516 107 ntBASIC0.05□□□□□ -2.4
TNFRSF4P43489 Y_RNA.377-201ENST00000365644 108 ntBASIC0.05□□□□□ -2.4
TNFRSF4P43489 SNORD110-201ENST00000408189 75 ntBASIC0.05□□□□□ -2.4
TNFRSF4P43489 AL161932.1-201ENST00000437408 146 ntBASIC0.05□□□□□ -2.4
TNFRSF4P43489 AC068339.1-201ENST00000526965 141 ntBASIC0.05□□□□□ -2.4
TNFRSF4P43489 MIR4694-201ENST00000578534 80 ntBASIC0.05□□□□□ -2.4
TNFRSF4P43489 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC0.05□□□□□ -2.4
TNFRSF4P43489 SNORD114-5-201ENST00000362928 70 ntBASIC0.04□□□□□ -2.4
TNFRSF4P43489 RNU6-1125P-201ENST00000363601 107 ntBASIC0.04□□□□□ -2.4
TNFRSF4P43489 U8.6-201ENST00000364939 135 ntBASIC0.04□□□□□ -2.4
TNFRSF4P43489 SNORD115-44-201ENST00000365391 82 ntBASIC0.04□□□□□ -2.4
TNFRSF4P43489 RNU6-480P-201ENST00000384332 107 ntBASIC0.04□□□□□ -2.4
TNFRSF4P43489 MIR501-201ENST00000390204 84 ntBASIC0.04□□□□□ -2.4
TNFRSF4P43489 RNY3P2-201ENST00000362918 102 ntBASIC0.03□□□□□ -2.4
TNFRSF4P43489 Y_RNA.78-201ENST00000362970 110 ntBASIC0.03□□□□□ -2.4
TNFRSF4P43489 RNU6-832P-201ENST00000363319 107 ntBASIC0.03□□□□□ -2.4
TNFRSF4P43489 Y_RNA.163-201ENST00000363702 113 ntBASIC0.03□□□□□ -2.4
TNFRSF4P43489 SNORD114-9-201ENST00000364370 72 ntBASIC0.03□□□□□ -2.4
TNFRSF4P43489 RNU6-652P-201ENST00000365488 107 ntBASIC0.03□□□□□ -2.4
TNFRSF4P43489 MIR329-2-201ENST00000385029 84 ntBASIC0.03□□□□□ -2.4
TNFRSF4P43489 RNU6-466P-201ENST00000391224 103 ntBASIC0.03□□□□□ -2.4
TNFRSF4P43489 MIR1295A-201ENST00000408463 79 ntBASIC0.03□□□□□ -2.4
TNFRSF4P43489 Y_RNA.660-201ENST00000516002 120 ntBASIC0.03□□□□□ -2.4
TNFRSF4P43489 RNU6-957P-201ENST00000363652 99 ntBASIC0.02□□□□□ -2.41
TNFRSF4P43489 Y_RNA.178-201ENST00000363832 102 ntBASIC0.02□□□□□ -2.41
TNFRSF4P43489 RNU6-880P-201ENST00000384526 107 ntBASIC0.02□□□□□ -2.41
TNFRSF4P43489 RNU6-959P-201ENST00000384671 107 ntBASIC0.02□□□□□ -2.41
TNFRSF4P43489 MIR593-201ENST00000384856 100 ntBASIC0.02□□□□□ -2.41
TNFRSF4P43489 MIR181B2-201ENST00000385004 89 ntBASIC0.02□□□□□ -2.41
TNFRSF4P43489 TMSB4XP3-201ENST00000445144 114 ntBASIC0.02□□□□□ -2.41
TNFRSF4P43489 AC141557.1-201ENST00000540982 400 ntBASIC0.02□□□□□ -2.41
TNFRSF4P43489 MIR5009-201ENST00000578736 100 ntBASIC0.02□□□□□ -2.41
TNFRSF4P43489 uc_338.28-201ENST00000612082 187 ntBASIC0.02□□□□□ -2.41
TNFRSF4P43489 U6.100-201ENST00000636230 99 ntBASIC0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 169.8 ms