Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 MTATP8P1-201ENST00000467115 207 ntBASIC-0.85□□□□□ -2.55
USF1P22415 SCARNA17-201ENST00000516183 144 ntBASIC-0.85□□□□□ -2.55
USF1P22415 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.85□□□□□ -2.55
USF1P22415 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.85□□□□□ -2.55
USF1P22415 MIR6844-201ENST00000637122 62 ntBASIC-0.85□□□□□ -2.55
USF1P22415 SNORD115-25-201ENST00000362619 82 ntBASIC-0.86□□□□□ -2.55
USF1P22415 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.86□□□□□ -2.55
USF1P22415 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.86□□□□□ -2.55
USF1P22415 RNU6-721P-201ENST00000410155 105 ntBASIC-0.86□□□□□ -2.55
USF1P22415 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.86□□□□□ -2.55
USF1P22415 MTCYBP6-201ENST00000441810 138 ntBASIC-0.86□□□□□ -2.55
USF1P22415 SPINT5P-201ENST00000448174 155 ntBASIC-0.86□□□□□ -2.55
USF1P22415 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.86□□□□□ -2.55
USF1P22415 RNY4P20-201ENST00000516678 93 ntBASIC-0.86□□□□□ -2.55
USF1P22415 MIR3646-201ENST00000578301 84 ntBASIC-0.86□□□□□ -2.55
USF1P22415 SNORD36A-201ENST00000362874 73 ntBASIC-0.87□□□□□ -2.55
USF1P22415 Y_RNA.396-201ENST00000383949 103 ntBASIC-0.87□□□□□ -2.55
USF1P22415 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.87□□□□□ -2.55
USF1P22415 RNU2-38P-201ENST00000410856 79 ntBASIC-0.87□□□□□ -2.55
USF1P22415 SNORA13-201ENST00000458790 133 ntBASIC-0.87□□□□□ -2.55
USF1P22415 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-0.87□□□□□ -2.55
USF1P22415 AL137067.1-201ENST00000615933 120 ntBASIC-0.87□□□□□ -2.55
USF1P22415 RNU6-508P-201ENST00000363231 103 ntBASIC-0.88□□□□□ -2.55
USF1P22415 RNU4-36P-201ENST00000364294 144 ntBASIC-0.88□□□□□ -2.55
USF1P22415 RNU6-588P-201ENST00000410281 105 ntBASIC-0.88□□□□□ -2.55
USF1P22415 MTND2P23-201ENST00000422990 651 ntBASIC-0.88□□□□□ -2.55
USF1P22415 SNORA40.17-201ENST00000517256 115 ntBASIC-0.88□□□□□ -2.55
USF1P22415 SNORD27-201ENST00000363981 72 ntBASIC-0.89□□□□□ -2.55
USF1P22415 RNU6-312P-201ENST00000364629 107 ntBASIC-0.89□□□□□ -2.55
USF1P22415 Y_RNA.422-201ENST00000384054 114 ntBASIC-0.89□□□□□ -2.55
USF1P22415 MIR587-201ENST00000384845 96 ntBASIC-0.89□□□□□ -2.55
USF1P22415 RNU6-243P-201ENST00000391140 107 ntBASIC-0.89□□□□□ -2.55
USF1P22415 SNORD58.1-201ENST00000391313 66 ntBASIC-0.89□□□□□ -2.55
USF1P22415 SNORD127-201ENST00000458892 86 ntBASIC-0.89□□□□□ -2.55
USF1P22415 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.89□□□□□ -2.55
USF1P22415 MIR4499-201ENST00000584834 69 ntBASIC-0.89□□□□□ -2.55
USF1P22415 AC044792.1-201ENST00000593294 196 ntBASIC-0.89□□□□□ -2.55
USF1P22415 MIR548O2-201ENST00000616090 70 ntBASIC-0.89□□□□□ -2.55
USF1P22415 RNU6-502P-201ENST00000362419 108 ntBASIC-0.9□□□□□ -2.55
USF1P22415 Y_RNA.65-201ENST00000362846 100 ntBASIC-0.9□□□□□ -2.55
USF1P22415 RNU6-309P-201ENST00000364573 106 ntBASIC-0.9□□□□□ -2.55
USF1P22415 RNU6-973P-201ENST00000364690 107 ntBASIC-0.9□□□□□ -2.55
USF1P22415 Y_RNA.435-201ENST00000384095 112 ntBASIC-0.9□□□□□ -2.55
USF1P22415 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.9□□□□□ -2.55
USF1P22415 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.9□□□□□ -2.55
USF1P22415 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.9□□□□□ -2.55
USF1P22415 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.9□□□□□ -2.55
USF1P22415 Y_RNA.690-201ENST00000516603 95 ntBASIC-0.9□□□□□ -2.55
USF1P22415 Y_RNA.720-201ENST00000517166 92 ntBASIC-0.9□□□□□ -2.55
USF1P22415 MIR6738-201ENST00000619620 64 ntBASIC-0.9□□□□□ -2.55
USF1P22415 MTND5P18-201ENST00000445624 1801 ntBASIC-0.91□□□□□ -2.55
USF1P22415 RNU4-32P-201ENST00000363404 141 ntBASIC-0.91□□□□□ -2.56
USF1P22415 RNU6-957P-201ENST00000363652 99 ntBASIC-0.91□□□□□ -2.56
USF1P22415 Y_RNA.288-201ENST00000364854 92 ntBASIC-0.91□□□□□ -2.56
USF1P22415 MIR582-201ENST00000365731 98 ntBASIC-0.91□□□□□ -2.56
USF1P22415 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.91□□□□□ -2.56
USF1P22415 RNU6-521P-201ENST00000516663 105 ntBASIC-0.91□□□□□ -2.56
USF1P22415 RNU7-6P-201ENST00000516845 62 ntBASIC-0.91□□□□□ -2.56
USF1P22415 Y_RNA.773-201ENST00000607168 90 ntBASIC-0.91□□□□□ -2.56
USF1P22415 SNORD115-19-201ENST00000363098 82 ntBASIC-0.92□□□□□ -2.56
USF1P22415 SNORD115-18-201ENST00000363293 82 ntBASIC-0.92□□□□□ -2.56
USF1P22415 SNORD115-17-201ENST00000364612 82 ntBASIC-0.92□□□□□ -2.56
USF1P22415 RNU6-10P-201ENST00000384036 107 ntBASIC-0.92□□□□□ -2.56
USF1P22415 RNU6-476P-201ENST00000384726 107 ntBASIC-0.92□□□□□ -2.56
USF1P22415 MIR518B-201ENST00000385127 83 ntBASIC-0.92□□□□□ -2.56
USF1P22415 Y_RNA.584-201ENST00000391090 114 ntBASIC-0.92□□□□□ -2.56
USF1P22415 RNU6-918P-201ENST00000391219 106 ntBASIC-0.92□□□□□ -2.56
USF1P22415 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.92□□□□□ -2.56
USF1P22415 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.92□□□□□ -2.56
USF1P22415 MIR3179-1-201ENST00000578940 84 ntBASIC-0.92□□□□□ -2.56
USF1P22415 MIR3179-2-201ENST00000579107 84 ntBASIC-0.92□□□□□ -2.56
USF1P22415 MIR3179-3-201ENST00000579566 84 ntBASIC-0.92□□□□□ -2.56
USF1P22415 MIR5704-201ENST00000584029 77 ntBASIC-0.92□□□□□ -2.56
USF1P22415 MIR4324-201ENST00000584846 72 ntBASIC-0.92□□□□□ -2.56
USF1P22415 uc_338.19-201ENST00000616808 99 ntBASIC-0.92□□□□□ -2.56
USF1P22415 MIR3179-4-201ENST00000617599 84 ntBASIC-0.92□□□□□ -2.56
USF1P22415 RNU6-235P-201ENST00000362644 107 ntBASIC-0.93□□□□□ -2.56
USF1P22415 RNY1P11-201ENST00000363759 113 ntBASIC-0.93□□□□□ -2.56
USF1P22415 MT-TI-201ENST00000387365 69 ntBASIC-0.93□□□□□ -2.56
USF1P22415 MIR548E-201ENST00000408287 88 ntBASIC-0.93□□□□□ -2.56
USF1P22415 MIR548F4-201ENST00000408515 105 ntBASIC-0.93□□□□□ -2.56
USF1P22415 AC097510.1-201ENST00000510945 133 ntBASIC-0.93□□□□□ -2.56
USF1P22415 RNA5SP470-201ENST00000516463 106 ntBASIC-0.93□□□□□ -2.56
USF1P22415 Y_RNA.700-201ENST00000516806 100 ntBASIC-0.93□□□□□ -2.56
USF1P22415 Y_RNA.701-201ENST00000516812 110 ntBASIC-0.93□□□□□ -2.56
USF1P22415 AC108081.1-201ENST00000604358 221 ntBASIC-0.93□□□□□ -2.56
USF1P22415 Y_RNA.20-201ENST00000362479 113 ntBASIC-0.94□□□□□ -2.56
USF1P22415 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.94□□□□□ -2.56
USF1P22415 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.94□□□□□ -2.56
USF1P22415 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.94□□□□□ -2.56
USF1P22415 MIR216B-201ENST00000390186 82 ntBASIC-0.94□□□□□ -2.56
USF1P22415 SNORD22.1-201ENST00000516331 125 ntBASIC-0.94□□□□□ -2.56
USF1P22415 MIR378F-201ENST00000578143 78 ntBASIC-0.94□□□□□ -2.56
USF1P22415 MIR4696-201ENST00000581431 70 ntBASIC-0.94□□□□□ -2.56
USF1P22415 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.95□□□□□ -2.56
USF1P22415 SNX3P1X-201ENST00000414887 175 ntBASIC-0.95□□□□□ -2.56
USF1P22415 MIR3163-201ENST00000581592 73 ntBASIC-0.95□□□□□ -2.56
USF1P22415 RNU6-664P-201ENST00000362381 107 ntBASIC-0.96□□□□□ -2.56
USF1P22415 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.96□□□□□ -2.56
USF1P22415 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.96□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 214.2 ms