Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 MTND5P40-201ENST00000559945 246 ntBASIC-0.26□□□□□ -2.45
CAPN3P20807 MIR4677-201ENST00000584153 80 ntBASIC-0.26□□□□□ -2.45
CAPN3P20807 AC087741.2-201ENST00000619415 172 ntBASIC-0.26□□□□□ -2.45
CAPN3P20807 AP001340.1-201ENST00000624405 217 ntBASIC-0.26□□□□□ -2.45
CAPN3P20807 SNORD115-44-201ENST00000365391 82 ntBASIC-0.27□□□□□ -2.45
CAPN3P20807 RNU6-524P-201ENST00000384270 107 ntBASIC-0.27□□□□□ -2.45
CAPN3P20807 RNU7-165P-201ENST00000458864 60 ntBASIC-0.27□□□□□ -2.45
CAPN3P20807 RNU6-521P-201ENST00000516663 105 ntBASIC-0.27□□□□□ -2.45
CAPN3P20807 RNU6-850P-201ENST00000516934 103 ntBASIC-0.27□□□□□ -2.45
CAPN3P20807 MIR3925-201ENST00000584674 77 ntBASIC-0.27□□□□□ -2.45
CAPN3P20807 Y_RNA.114-201ENST00000363265 113 ntBASIC-0.28□□□□□ -2.45
CAPN3P20807 MIR34C-201ENST00000384831 77 ntBASIC-0.28□□□□□ -2.45
CAPN3P20807 MIR106A-201ENST00000384870 81 ntBASIC-0.28□□□□□ -2.45
CAPN3P20807 RN7SKP19-201ENST00000516016 252 ntBASIC-0.28□□□□□ -2.45
CAPN3P20807 NAMPTP3-201ENST00000569273 224 ntBASIC-0.28□□□□□ -2.45
CAPN3P20807 MIR548X2-201ENST00000579776 100 ntBASIC-0.28□□□□□ -2.45
CAPN3P20807 MIR3920-201ENST00000581751 86 ntBASIC-0.28□□□□□ -2.45
CAPN3P20807 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.29□□□□□ -2.46
CAPN3P20807 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.29□□□□□ -2.46
CAPN3P20807 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.3□□□□□ -2.46
CAPN3P20807 AL670379.3-201ENST00000605040 251 ntBASIC-0.3□□□□□ -2.46
CAPN3P20807 AC084368.1-201ENST00000620935 65 ntBASIC-0.3□□□□□ -2.46
CAPN3P20807 RNA5SP484-201ENST00000458857 111 ntBASIC-0.31□□□□□ -2.46
CAPN3P20807 U7.2-201ENST00000607576 63 ntBASIC-0.31□□□□□ -2.46
CAPN3P20807 MIR1263-201ENST00000408324 86 ntBASIC-0.32□□□□□ -2.46
CAPN3P20807 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.32□□□□□ -2.46
CAPN3P20807 SNORA25.13-201ENST00000516395 103 ntBASIC-0.32□□□□□ -2.46
CAPN3P20807 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.33□□□□□ -2.46
CAPN3P20807 RNU6-1130P-201ENST00000365434 107 ntBASIC-0.33□□□□□ -2.46
CAPN3P20807 RNU6-394P-201ENST00000410735 107 ntBASIC-0.33□□□□□ -2.46
CAPN3P20807 RNU6-180P-201ENST00000516697 61 ntBASIC-0.33□□□□□ -2.46
CAPN3P20807 CR383656.4-201ENST00000546909 122 ntBASIC-0.33□□□□□ -2.46
CAPN3P20807 AL512310.12-203ENST00000640543 90 ntBASIC-0.33□□□□□ -2.46
CAPN3P20807 SNORA18.1-201ENST00000363418 128 ntBASIC-0.34□□□□□ -2.46
CAPN3P20807 Y_RNA.420-201ENST00000384043 110 ntBASIC-0.34□□□□□ -2.46
CAPN3P20807 RNY1P9-201ENST00000532431 109 ntBASIC-0.34□□□□□ -2.46
CAPN3P20807 Y_RNA.773-201ENST00000607168 90 ntBASIC-0.34□□□□□ -2.46
CAPN3P20807 MIR6514-201ENST00000622549 70 ntBASIC-0.34□□□□□ -2.46
CAPN3P20807 MIR148A-201ENST00000362215 68 ntBASIC-0.35□□□□□ -2.47
CAPN3P20807 SNORD114-12-201ENST00000365400 75 ntBASIC-0.35□□□□□ -2.47
CAPN3P20807 Y_RNA.400-201ENST00000383963 111 ntBASIC-0.35□□□□□ -2.47
CAPN3P20807 RNU6-243P-201ENST00000391140 107 ntBASIC-0.35□□□□□ -2.47
CAPN3P20807 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.35□□□□□ -2.47
CAPN3P20807 SNORD4A-201ENST00000459174 72 ntBASIC-0.35□□□□□ -2.47
CAPN3P20807 RNU7-106P-201ENST00000459514 67 ntBASIC-0.35□□□□□ -2.47
CAPN3P20807 IGKV1-22-201ENST00000524313 326 ntBASIC-0.35□□□□□ -2.47
CAPN3P20807 RNU1-141P-201ENST00000364623 158 ntBASIC-0.36□□□□□ -2.47
CAPN3P20807 Y_RNA.507-201ENST00000384500 99 ntBASIC-0.36□□□□□ -2.47
CAPN3P20807 MIR516A2-201ENST00000384888 90 ntBASIC-0.36□□□□□ -2.47
CAPN3P20807 MIR548D2-201ENST00000384955 97 ntBASIC-0.36□□□□□ -2.47
CAPN3P20807 MIR617-201ENST00000385030 97 ntBASIC-0.36□□□□□ -2.47
CAPN3P20807 MIR516A1-201ENST00000385033 90 ntBASIC-0.36□□□□□ -2.47
CAPN3P20807 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.37□□□□□ -2.47
CAPN3P20807 Y_RNA.528-201ENST00000384575 108 ntBASIC-0.37□□□□□ -2.47
CAPN3P20807 SNORA7.5-201ENST00000410672 110 ntBASIC-0.37□□□□□ -2.47
CAPN3P20807 SNX3P1X-201ENST00000414887 175 ntBASIC-0.37□□□□□ -2.47
CAPN3P20807 SPINT5P-201ENST00000448174 155 ntBASIC-0.37□□□□□ -2.47
CAPN3P20807 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.37□□□□□ -2.47
CAPN3P20807 RNY4P6-201ENST00000363667 96 ntBASIC-0.38□□□□□ -2.47
CAPN3P20807 MIR876-201ENST00000401147 81 ntBASIC-0.38□□□□□ -2.47
CAPN3P20807 AL158147.1-201ENST00000443970 75 ntBASIC-0.38□□□□□ -2.47
CAPN3P20807 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.38□□□□□ -2.47
CAPN3P20807 MIR3144-201ENST00000579460 79 ntBASIC-0.38□□□□□ -2.47
CAPN3P20807 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.38□□□□□ -2.47
CAPN3P20807 Y_RNA.8-201ENST00000362353 102 ntBASIC-0.39□□□□□ -2.47
CAPN3P20807 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.39□□□□□ -2.47
CAPN3P20807 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.39□□□□□ -2.47
CAPN3P20807 SNORD38.1-201ENST00000363863 68 ntBASIC-0.39□□□□□ -2.47
CAPN3P20807 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.39□□□□□ -2.47
CAPN3P20807 MIR516B1-201ENST00000385211 90 ntBASIC-0.39□□□□□ -2.47
CAPN3P20807 MT-TI-201ENST00000387365 69 ntBASIC-0.39□□□□□ -2.47
CAPN3P20807 MIR548AX-201ENST00000580117 73 ntBASIC-0.39□□□□□ -2.47
CAPN3P20807 RNU6-90P-201ENST00000606352 106 ntBASIC-0.39□□□□□ -2.47
CAPN3P20807 AC069503.3-201ENST00000618674 145 ntBASIC-0.39□□□□□ -2.47
CAPN3P20807 MIR1255B1-201ENST00000636325 63 ntBASIC-0.39□□□□□ -2.47
CAPN3P20807 RNU6-363P-201ENST00000362895 105 ntBASIC-0.4□□□□□ -2.47
CAPN3P20807 RNU6-409P-201ENST00000384114 104 ntBASIC-0.4□□□□□ -2.47
CAPN3P20807 MIR4723-201ENST00000585070 81 ntBASIC-0.4□□□□□ -2.47
CAPN3P20807 MIR1468-201ENST00000410600 86 ntBASIC-0.41□□□□□ -2.48
CAPN3P20807 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.42□□□□□ -2.48
CAPN3P20807 RNU6-804P-201ENST00000384286 107 ntBASIC-0.42□□□□□ -2.48
CAPN3P20807 AL078595.1-201ENST00000404458 226 ntBASIC-0.42□□□□□ -2.48
CAPN3P20807 MIR548G-201ENST00000408442 89 ntBASIC-0.42□□□□□ -2.48
CAPN3P20807 RNU6-320P-201ENST00000516511 106 ntBASIC-0.42□□□□□ -2.48
CAPN3P20807 RN7SL660P-201ENST00000614852 299 ntBASIC-0.42□□□□□ -2.48
CAPN3P20807 uc_338.10-201ENST00000621872 182 ntBASIC-0.42□□□□□ -2.48
CAPN3P20807 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.43□□□□□ -2.48
CAPN3P20807 Y_RNA.398-201ENST00000383952 99 ntBASIC-0.43□□□□□ -2.48
CAPN3P20807 MIR519E-201ENST00000385075 84 ntBASIC-0.43□□□□□ -2.48
CAPN3P20807 RNU4-63P-201ENST00000411313 118 ntBASIC-0.43□□□□□ -2.48
CAPN3P20807 AC109327.2-201ENST00000448339 378 ntBASIC-0.43□□□□□ -2.48
CAPN3P20807 MIR4460-201ENST00000577862 86 ntBASIC-0.43□□□□□ -2.48
CAPN3P20807 RNA5SP275-201ENST00000363936 118 ntBASIC-0.44□□□□□ -2.48
CAPN3P20807 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.44□□□□□ -2.48
CAPN3P20807 MIR2113-201ENST00000459007 91 ntBASIC-0.44□□□□□ -2.48
CAPN3P20807 MIR3666-201ENST00000607845 111 ntBASIC-0.44□□□□□ -2.48
CAPN3P20807 FTX_2.1-201ENST00000618816 94 ntBASIC-0.44□□□□□ -2.48
CAPN3P20807 TRDV1-202ENST00000621643 102 ntBASIC-0.44□□□□□ -2.48
CAPN3P20807 SNORD14C-201ENST00000365382 88 ntBASIC-0.45□□□□□ -2.48
CAPN3P20807 MIR569-201ENST00000385228 96 ntBASIC-0.45□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 176.5 ms