Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 MIR3613-201ENST00000579844 87 ntBASIC0.11□□□□□ -2.39
TOP1P11387 RNU6-90P-201ENST00000606352 106 ntBASIC0.11□□□□□ -2.39
TOP1P11387 uc_338.28-201ENST00000612082 187 ntBASIC0.11□□□□□ -2.39
TOP1P11387 AL442128.1-201ENST00000615151 90 ntBASIC0.11□□□□□ -2.39
TOP1P11387 RNA5SP457-201ENST00000363657 124 ntBASIC0.1□□□□□ -2.39
TOP1P11387 SNORD38.2-201ENST00000384470 69 ntBASIC0.1□□□□□ -2.39
TOP1P11387 Y_RNA.507-201ENST00000384500 99 ntBASIC0.1□□□□□ -2.39
TOP1P11387 MIR577-201ENST00000385196 96 ntBASIC0.1□□□□□ -2.39
TOP1P11387 MIR760-201ENST00000390220 80 ntBASIC0.1□□□□□ -2.39
TOP1P11387 MIR548H2-201ENST00000408874 88 ntBASIC0.1□□□□□ -2.39
TOP1P11387 SPINT5P-201ENST00000448174 155 ntBASIC0.1□□□□□ -2.39
TOP1P11387 SNORD33.1-201ENST00000516213 88 ntBASIC0.1□□□□□ -2.39
TOP1P11387 MIR548AG2-201ENST00000581228 64 ntBASIC0.1□□□□□ -2.39
TOP1P11387 MIR499B-201ENST00000636498 73 ntBASIC0.1□□□□□ -2.39
TOP1P11387 SNORA9.1-201ENST00000362412 131 ntBASIC0.09□□□□□ -2.4
TOP1P11387 RNA5SP325-201ENST00000363756 130 ntBASIC0.09□□□□□ -2.4
TOP1P11387 SNORD114-9-201ENST00000364370 72 ntBASIC0.09□□□□□ -2.4
TOP1P11387 RNU6-1163P-201ENST00000364516 107 ntBASIC0.09□□□□□ -2.4
TOP1P11387 RNA5SP128-201ENST00000365305 116 ntBASIC0.09□□□□□ -2.4
TOP1P11387 Y_RNA.353-201ENST00000365440 108 ntBASIC0.09□□□□□ -2.4
TOP1P11387 RNU6-127P-201ENST00000390897 107 ntBASIC0.09□□□□□ -2.4
TOP1P11387 RNA5SP63-201ENST00000391225 112 ntBASIC0.09□□□□□ -2.4
TOP1P11387 MIR1912-201ENST00000410389 80 ntBASIC0.09□□□□□ -2.4
TOP1P11387 Y_RNA.649-201ENST00000459077 103 ntBASIC0.09□□□□□ -2.4
TOP1P11387 RNA5SP214-201ENST00000363378 118 ntBASIC0.08□□□□□ -2.4
TOP1P11387 SNORA42.1-201ENST00000363515 137 ntBASIC0.08□□□□□ -2.4
TOP1P11387 RNU6-81P-201ENST00000365608 104 ntBASIC0.08□□□□□ -2.4
TOP1P11387 Y_RNA.377-201ENST00000365644 108 ntBASIC0.08□□□□□ -2.4
TOP1P11387 SNORD116-14-201ENST00000383894 92 ntBASIC0.08□□□□□ -2.4
TOP1P11387 SNORD116-17-201ENST00000383929 92 ntBASIC0.08□□□□□ -2.4
TOP1P11387 SNORD116-15-201ENST00000384445 92 ntBASIC0.08□□□□□ -2.4
TOP1P11387 RNU6-959P-201ENST00000384671 107 ntBASIC0.08□□□□□ -2.4
TOP1P11387 SNORD116-19-201ENST00000384729 92 ntBASIC0.08□□□□□ -2.4
TOP1P11387 MIR548A1-201ENST00000385041 97 ntBASIC0.08□□□□□ -2.4
TOP1P11387 MIR501-201ENST00000390204 84 ntBASIC0.08□□□□□ -2.4
TOP1P11387 RNU6-1254P-201ENST00000391266 104 ntBASIC0.08□□□□□ -2.4
TOP1P11387 MIR548L-201ENST00000408303 86 ntBASIC0.08□□□□□ -2.4
TOP1P11387 AL161932.1-201ENST00000437408 146 ntBASIC0.08□□□□□ -2.4
TOP1P11387 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.08□□□□□ -2.4
TOP1P11387 AC068339.1-201ENST00000526965 141 ntBASIC0.08□□□□□ -2.4
TOP1P11387 Y_RNA.309-201ENST00000365046 111 ntBASIC0.07□□□□□ -2.4
TOP1P11387 Y_RNA.563-201ENST00000384707 108 ntBASIC0.07□□□□□ -2.4
TOP1P11387 MIR5706-201ENST00000579841 80 ntBASIC0.07□□□□□ -2.4
TOP1P11387 Y_RNA.57-201ENST00000362806 113 ntBASIC0.06□□□□□ -2.4
TOP1P11387 RNU6-161P-201ENST00000363051 106 ntBASIC0.06□□□□□ -2.4
TOP1P11387 RNU6-832P-201ENST00000363319 107 ntBASIC0.06□□□□□ -2.4
TOP1P11387 Y_RNA.261-201ENST00000364631 102 ntBASIC0.06□□□□□ -2.4
TOP1P11387 U8.6-201ENST00000364939 135 ntBASIC0.06□□□□□ -2.4
TOP1P11387 AC093423.1-201ENST00000440817 142 ntBASIC0.06□□□□□ -2.4
TOP1P11387 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.06□□□□□ -2.4
TOP1P11387 RNA5SP484-201ENST00000458857 111 ntBASIC0.06□□□□□ -2.4
TOP1P11387 RNU7-13P-201ENST00000516413 62 ntBASIC0.06□□□□□ -2.4
TOP1P11387 MIR4694-201ENST00000578534 80 ntBASIC0.06□□□□□ -2.4
TOP1P11387 MIR548AD-201ENST00000584780 82 ntBASIC0.06□□□□□ -2.4
TOP1P11387 AC104408.1-201ENST00000605241 170 ntBASIC0.06□□□□□ -2.4
TOP1P11387 AL109933.3-201ENST00000619095 188 ntBASIC0.06□□□□□ -2.4
TOP1P11387 U6.95-201ENST00000636931 70 ntBASIC0.06□□□□□ -2.4
TOP1P11387 MIR519E-201ENST00000385075 84 ntBASIC0.05□□□□□ -2.4
TOP1P11387 RNU6-243P-201ENST00000391140 107 ntBASIC0.05□□□□□ -2.4
TOP1P11387 HMGN2P22-201ENST00000427588 175 ntBASIC0.05□□□□□ -2.4
TOP1P11387 AC109327.2-201ENST00000448339 378 ntBASIC0.05□□□□□ -2.4
TOP1P11387 RNU6-1333P-201ENST00000516162 93 ntBASIC0.05□□□□□ -2.4
TOP1P11387 RNU6-782P-201ENST00000516852 104 ntBASIC0.05□□□□□ -2.4
TOP1P11387 NAMPTP3-201ENST00000569273 224 ntBASIC0.05□□□□□ -2.4
TOP1P11387 MIR5009-201ENST00000578736 100 ntBASIC0.05□□□□□ -2.4
TOP1P11387 MIR3925-201ENST00000584674 77 ntBASIC0.05□□□□□ -2.4
TOP1P11387 MTRNR2L2-201ENST00000604882 87 ntBASIC0.05□□□□□ -2.4
TOP1P11387 RNU6-957P-201ENST00000363652 99 ntBASIC0.04□□□□□ -2.4
TOP1P11387 RNU1-141P-201ENST00000364623 158 ntBASIC0.04□□□□□ -2.4
TOP1P11387 MIR181B2-201ENST00000385004 89 ntBASIC0.04□□□□□ -2.4
TOP1P11387 MIR643-201ENST00000385267 97 ntBASIC0.04□□□□□ -2.4
TOP1P11387 MIR548A3-201ENST00000385297 97 ntBASIC0.04□□□□□ -2.4
TOP1P11387 RNU7-129P-201ENST00000516128 62 ntBASIC0.04□□□□□ -2.4
TOP1P11387 RNU6-287P-201ENST00000516230 98 ntBASIC0.04□□□□□ -2.4
TOP1P11387 MIR4677-201ENST00000584153 80 ntBASIC0.04□□□□□ -2.4
TOP1P11387 AL670379.3-201ENST00000605040 251 ntBASIC0.04□□□□□ -2.4
TOP1P11387 MIR2909-201ENST00000617113 69 ntBASIC0.04□□□□□ -2.4
TOP1P11387 TRDV1-202ENST00000621643 102 ntBASIC0.04□□□□□ -2.4
TOP1P11387 U6.100-201ENST00000636230 99 ntBASIC0.04□□□□□ -2.4
TOP1P11387 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC0.04□□□□□ -2.4
TOP1P11387 AC073869.9-201ENST00000641610 120 ntBASIC0.04□□□□□ -2.4
TOP1P11387 RNY3P2-201ENST00000362918 102 ntBASIC0.03□□□□□ -2.4
TOP1P11387 RNU6-1244P-201ENST00000363614 108 ntBASIC0.03□□□□□ -2.4
TOP1P11387 Y_RNA.281-201ENST00000364774 94 ntBASIC0.03□□□□□ -2.4
TOP1P11387 MIR617-201ENST00000385030 97 ntBASIC0.03□□□□□ -2.4
TOP1P11387 SNORD110-201ENST00000408189 75 ntBASIC0.03□□□□□ -2.4
TOP1P11387 MIR548M-201ENST00000408260 86 ntBASIC0.03□□□□□ -2.4
TOP1P11387 snoU13.11-201ENST00000459219 104 ntBASIC0.03□□□□□ -2.4
TOP1P11387 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.03□□□□□ -2.4
TOP1P11387 RNU6-86P-201ENST00000606534 107 ntBASIC0.03□□□□□ -2.4
TOP1P11387 AL365222.1-201ENST00000614661 98 ntBASIC0.03□□□□□ -2.4
TOP1P11387 Y_RNA.78-201ENST00000362970 110 ntBASIC0.02□□□□□ -2.41
TOP1P11387 Y_RNA.125-201ENST00000363371 111 ntBASIC0.02□□□□□ -2.41
TOP1P11387 RNU6-509P-201ENST00000363519 107 ntBASIC0.02□□□□□ -2.41
TOP1P11387 SNORD115-44-201ENST00000365391 82 ntBASIC0.02□□□□□ -2.41
TOP1P11387 MIR2113-201ENST00000459007 91 ntBASIC0.02□□□□□ -2.41
TOP1P11387 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.02□□□□□ -2.41
TOP1P11387 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.01□□□□□ -2.41
TOP1P11387 Y_RNA.207-201ENST00000364142 106 ntBASIC0.01□□□□□ -2.41
TOP1P11387 MIR4290-201ENST00000583807 95 ntBASIC0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 207.6 ms