Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 RNU6-994P-201ENST00000410507 111 ntBASIC2.59□□□□□ -1.99
CHGAP10645 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
CHGAP10645 Y_RNA.12-201ENST00000362393 112 ntBASIC2.58□□□□□ -2
CHGAP10645 SNORD79.1-201ENST00000516069 84 ntBASIC2.58□□□□□ -2
CHGAP10645 Y_RNA.681-201ENST00000516445 113 ntBASIC2.58□□□□□ -2
CHGAP10645 AC008608.1-201ENST00000603910 127 ntBASIC2.58□□□□□ -2
CHGAP10645 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2.58□□□□□ -2
CHGAP10645 AC074348.1-201ENST00000426503 132 ntBASIC2.57□□□□□ -2
CHGAP10645 RNU7-102P-201ENST00000458948 62 ntBASIC2.57□□□□□ -2
CHGAP10645 MIR4484-201ENST00000582855 83 ntBASIC2.57□□□□□ -2
CHGAP10645 BX248123.2-201ENST00000606318 124 ntBASIC2.57□□□□□ -2
CHGAP10645 Y_RNA.540-201ENST00000384638 111 ntBASIC2.56□□□□□ -2
CHGAP10645 RNU6-1265P-201ENST00000516342 103 ntBASIC2.56□□□□□ -2
CHGAP10645 MIR4804-201ENST00000581683 73 ntBASIC2.56□□□□□ -2
CHGAP10645 DLEU2_3.1-201ENST00000620005 73 ntBASIC2.56□□□□□ -2
CHGAP10645 RNU6-369P-201ENST00000362515 102 ntBASIC2.55□□□□□ -2
CHGAP10645 Y_RNA.207-201ENST00000364142 106 ntBASIC2.55□□□□□ -2
CHGAP10645 AC244505.6-201ENST00000452829 130 ntBASIC2.55□□□□□ -2
CHGAP10645 snoU13.17-201ENST00000458802 104 ntBASIC2.55□□□□□ -2
CHGAP10645 RNU6-717P-201ENST00000459076 104 ntBASIC2.55□□□□□ -2
CHGAP10645 AC079804.2-201ENST00000490376 200 ntBASIC2.55□□□□□ -2
CHGAP10645 AC114801.3-201ENST00000510231 177 ntBASIC2.55□□□□□ -2
CHGAP10645 RNU6-977P-201ENST00000516411 103 ntBASIC2.55□□□□□ -2
CHGAP10645 MIR502-201ENST00000606349 86 ntBASIC2.55□□□□□ -2
CHGAP10645 RNA5SP245-201ENST00000364239 121 ntBASIC2.54□□□□□ -2
CHGAP10645 RNU6-935P-201ENST00000410371 100 ntBASIC2.54□□□□□ -2
CHGAP10645 RNU6-871P-201ENST00000516122 100 ntBASIC2.54□□□□□ -2
CHGAP10645 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
CHGAP10645 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
CHGAP10645 SNORA16.1-201ENST00000364597 132 ntBASIC2.53□□□□□ -2
CHGAP10645 RNU1-119P-201ENST00000391122 165 ntBASIC2.53□□□□□ -2
CHGAP10645 RNU6ATAC8P-201ENST00000408460 126 ntBASIC2.53□□□□□ -2
CHGAP10645 RNU7-56P-201ENST00000458744 62 ntBASIC2.53□□□□□ -2
CHGAP10645 RNU6-70P-201ENST00000516438 60 ntBASIC2.53□□□□□ -2
CHGAP10645 MIR1-1-201ENST00000362147 71 ntBASIC2.52□□□□□ -2.01
CHGAP10645 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC2.52□□□□□ -2.01
CHGAP10645 MIR100-201ENST00000385259 80 ntBASIC2.51□□□□□ -2.01
CHGAP10645 SNORD12-201ENST00000391002 90 ntBASIC2.51□□□□□ -2.01
CHGAP10645 MIR1276-201ENST00000408707 83 ntBASIC2.51□□□□□ -2.01
CHGAP10645 SNORA70.22-201ENST00000517160 124 ntBASIC2.51□□□□□ -2.01
CHGAP10645 RNU6ATAC33P-201ENST00000408647 126 ntBASIC2.5□□□□□ -2.01
CHGAP10645 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
CHGAP10645 SNORA67.5-201ENST00000391036 107 ntBASIC2.48□□□□□ -2.01
CHGAP10645 AC067940.1-201ENST00000458411 300 ntBASIC2.48□□□□□ -2.01
CHGAP10645 RNU7-95P-201ENST00000459222 64 ntBASIC2.48□□□□□ -2.01
CHGAP10645 RNU6-1015P-201ENST00000517121 99 ntBASIC2.48□□□□□ -2.01
CHGAP10645 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CHGAP10645 RNU6-681P-201ENST00000364012 104 ntBASIC2.47□□□□□ -2.01
CHGAP10645 SNORD115-44-201ENST00000365391 82 ntBASIC2.47□□□□□ -2.01
CHGAP10645 RNA5SP480-201ENST00000516840 109 ntBASIC2.47□□□□□ -2.01
CHGAP10645 MIR4419B-201ENST00000577260 68 ntBASIC2.47□□□□□ -2.01
CHGAP10645 MIR3140-201ENST00000583685 90 ntBASIC2.47□□□□□ -2.01
CHGAP10645 MIR6504-201ENST00000613520 61 ntBASIC2.47□□□□□ -2.01
CHGAP10645 RNU6-340P-201ENST00000364005 107 ntBASIC2.46□□□□□ -2.02
CHGAP10645 RNU2-59P-201ENST00000410482 191 ntBASIC2.46□□□□□ -2.02
CHGAP10645 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.45□□□□□ -2.02
CHGAP10645 Y_RNA.36-201ENST00000362602 112 ntBASIC2.45□□□□□ -2.02
CHGAP10645 Y_RNA.174-201ENST00000363781 105 ntBASIC2.45□□□□□ -2.02
CHGAP10645 RNU6-590P-201ENST00000365039 107 ntBASIC2.45□□□□□ -2.02
CHGAP10645 MIR451A-201ENST00000385059 72 ntBASIC2.45□□□□□ -2.02
CHGAP10645 RNA5SP338-201ENST00000410495 85 ntBASIC2.45□□□□□ -2.02
CHGAP10645 Y_RNA.606-201ENST00000410579 103 ntBASIC2.45□□□□□ -2.02
CHGAP10645 AC097510.1-201ENST00000510945 133 ntBASIC2.45□□□□□ -2.02
CHGAP10645 RNU6-1057P-201ENST00000517162 102 ntBASIC2.45□□□□□ -2.02
CHGAP10645 AP000553.5-201ENST00000641933 54 ntBASIC2.45□□□□□ -2.02
CHGAP10645 Y_RNA.371-201ENST00000365591 113 ntBASIC2.44□□□□□ -2.02
CHGAP10645 MIR520F-201ENST00000384824 87 ntBASIC2.44□□□□□ -2.02
CHGAP10645 MIR942-201ENST00000401111 86 ntBASIC2.44□□□□□ -2.02
CHGAP10645 RNU6-687P-201ENST00000516443 89 ntBASIC2.44□□□□□ -2.02
CHGAP10645 IGLVVI-22-1-201ENST00000521183 211 ntBASIC2.44□□□□□ -2.02
CHGAP10645 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
CHGAP10645 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CHGAP10645 U3.27-201ENST00000391237 200 ntBASIC2.43□□□□□ -2.02
CHGAP10645 MIR1827-201ENST00000408549 66 ntBASIC2.43□□□□□ -2.02
CHGAP10645 RNU6-539P-201ENST00000516665 103 ntBASIC2.43□□□□□ -2.02
CHGAP10645 ZNF209P-201ENST00000593450 2304 ntBASIC2.42□□□□□ -2.02
CHGAP10645 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.42□□□□□ -2.02
CHGAP10645 RNU1-42P-201ENST00000364033 160 ntBASIC2.42□□□□□ -2.02
CHGAP10645 Y_RNA.327-201ENST00000365201 102 ntBASIC2.42□□□□□ -2.02
CHGAP10645 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
CHGAP10645 RNU6-587P-201ENST00000391282 106 ntBASIC2.42□□□□□ -2.02
CHGAP10645 Evf-2_5p.1-201ENST00000614213 142 ntBASIC2.42□□□□□ -2.02
CHGAP10645 AL157834.3-201ENST00000615543 103 ntBASIC2.42□□□□□ -2.02
CHGAP10645 uc_338.16-201ENST00000621804 95 ntBASIC2.42□□□□□ -2.02
CHGAP10645 RNA5SP37-201ENST00000365420 130 ntBASIC2.41□□□□□ -2.02
CHGAP10645 SNORA24B-201ENST00000384176 131 ntBASIC2.41□□□□□ -2.02
CHGAP10645 SNORA8.1-201ENST00000384250 140 ntBASIC2.41□□□□□ -2.02
CHGAP10645 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.41□□□□□ -2.02
CHGAP10645 RNU6-634P-201ENST00000459134 106 ntBASIC2.41□□□□□ -2.02
CHGAP10645 RNU6-287P-201ENST00000516230 98 ntBASIC2.4□□□□□ -2.03
CHGAP10645 SNORA31.14-201ENST00000516728 116 ntBASIC2.4□□□□□ -2.03
CHGAP10645 MIR4255-201ENST00000579351 72 ntBASIC2.4□□□□□ -2.03
CHGAP10645 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CHGAP10645 Y_RNA.32-201ENST00000362589 110 ntBASIC2.39□□□□□ -2.03
CHGAP10645 RNU6-392P-201ENST00000364926 101 ntBASIC2.39□□□□□ -2.03
CHGAP10645 RNU6-154P-201ENST00000384306 106 ntBASIC2.39□□□□□ -2.03
CHGAP10645 HMGN2P38-201ENST00000423806 265 ntBASIC2.39□□□□□ -2.03
CHGAP10645 SNORD53B-201ENST00000577887 78 ntBASIC2.39□□□□□ -2.03
CHGAP10645 RMST_2.1-201ENST00000617263 136 ntBASIC2.39□□□□□ -2.03
CHGAP10645 RNA5SP325-201ENST00000363756 130 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 240.7 ms