Protein–RNA interactions for Protein: P03956

MMP1, Interstitial collagenase, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP1P03956 HMGN2P22-201ENST00000427588 175 ntBASIC-0.03□□□□□ -2.41
MMP1P03956 MTND5P40-201ENST00000559945 246 ntBASIC-0.03□□□□□ -2.41
MMP1P03956 AC025166.1-201ENST00000612411 163 ntBASIC-0.03□□□□□ -2.41
MMP1P03956 AC073869.9-201ENST00000641610 120 ntBASIC-0.03□□□□□ -2.41
MMP1P03956 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.03□□□□□ -2.41
MMP1P03956 MTND5P18-201ENST00000445624 1801 ntBASIC-0.03□□□□□ -2.42
MMP1P03956 SNORD114-16-201ENST00000363044 70 ntBASIC-0.04□□□□□ -2.42
MMP1P03956 MIR593-201ENST00000384856 100 ntBASIC-0.04□□□□□ -2.42
MMP1P03956 MIR610-201ENST00000385139 96 ntBASIC-0.04□□□□□ -2.42
MMP1P03956 RNU7-13P-201ENST00000516413 62 ntBASIC-0.04□□□□□ -2.42
MMP1P03956 NAMPTP3-201ENST00000569273 224 ntBASIC-0.04□□□□□ -2.42
MMP1P03956 MIR4677-201ENST00000584153 80 ntBASIC-0.04□□□□□ -2.42
MMP1P03956 MIR3925-201ENST00000584674 77 ntBASIC-0.04□□□□□ -2.42
MMP1P03956 RNY1P5-201ENST00000383890 115 ntBASIC-0.05□□□□□ -2.42
MMP1P03956 RNU6-756P-201ENST00000383997 107 ntBASIC-0.05□□□□□ -2.42
MMP1P03956 SNORD38.2-201ENST00000384470 69 ntBASIC-0.05□□□□□ -2.42
MMP1P03956 RNU6-1061P-201ENST00000516530 99 ntBASIC-0.05□□□□□ -2.42
MMP1P03956 AL512310.12-203ENST00000640543 90 ntBASIC-0.05□□□□□ -2.42
MMP1P03956 SNORD36A-201ENST00000362874 73 ntBASIC-0.06□□□□□ -2.42
MMP1P03956 RNY4P6-201ENST00000363667 96 ntBASIC-0.06□□□□□ -2.42
MMP1P03956 SNORD38.1-201ENST00000363863 68 ntBASIC-0.06□□□□□ -2.42
MMP1P03956 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.06□□□□□ -2.42
MMP1P03956 SNORA40-201ENST00000388090 126 ntBASIC-0.06□□□□□ -2.42
MMP1P03956 SNORD110-201ENST00000408189 75 ntBASIC-0.06□□□□□ -2.42
MMP1P03956 MIR548G-201ENST00000408442 89 ntBASIC-0.06□□□□□ -2.42
MMP1P03956 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.06□□□□□ -2.42
MMP1P03956 RNU6-772P-201ENST00000516042 105 ntBASIC-0.06□□□□□ -2.42
MMP1P03956 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.06□□□□□ -2.42
MMP1P03956 MIR4743-201ENST00000584576 69 ntBASIC-0.06□□□□□ -2.42
MMP1P03956 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.06□□□□□ -2.42
MMP1P03956 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.07□□□□□ -2.42
MMP1P03956 RNU6-509P-201ENST00000363519 107 ntBASIC-0.07□□□□□ -2.42
MMP1P03956 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.07□□□□□ -2.42
MMP1P03956 Y_RNA.525-201ENST00000384570 113 ntBASIC-0.07□□□□□ -2.42
MMP1P03956 MIR519E-201ENST00000385075 84 ntBASIC-0.07□□□□□ -2.42
MMP1P03956 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.07□□□□□ -2.42
MMP1P03956 AC006210.1-201ENST00000424882 111 ntBASIC-0.07□□□□□ -2.42
MMP1P03956 AL161932.1-201ENST00000437408 146 ntBASIC-0.07□□□□□ -2.42
MMP1P03956 AC093423.1-201ENST00000440817 142 ntBASIC-0.07□□□□□ -2.42
MMP1P03956 SPINT5P-201ENST00000448174 155 ntBASIC-0.07□□□□□ -2.42
MMP1P03956 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.08□□□□□ -2.42
MMP1P03956 RNU1-141P-201ENST00000364623 158 ntBASIC-0.08□□□□□ -2.42
MMP1P03956 RNU6-409P-201ENST00000384114 104 ntBASIC-0.08□□□□□ -2.42
MMP1P03956 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.08□□□□□ -2.42
MMP1P03956 RNU6-816P-201ENST00000390914 107 ntBASIC-0.08□□□□□ -2.42
MMP1P03956 RNU6-1268P-201ENST00000391214 107 ntBASIC-0.08□□□□□ -2.42
MMP1P03956 RNU6-1239P-201ENST00000391310 107 ntBASIC-0.08□□□□□ -2.42
MMP1P03956 RNU7-107P-201ENST00000459121 61 ntBASIC-0.08□□□□□ -2.42
MMP1P03956 AC141557.1-201ENST00000540982 400 ntBASIC-0.08□□□□□ -2.42
MMP1P03956 RNU6-90P-201ENST00000606352 106 ntBASIC-0.08□□□□□ -2.42
MMP1P03956 U7.6-201ENST00000610841 64 ntBASIC-0.08□□□□□ -2.42
MMP1P03956 AL035470.1-201ENST00000622571 220 ntBASIC-0.08□□□□□ -2.42
MMP1P03956 AL162726.3-218ENST00000636401 95 ntBASIC-0.08□□□□□ -2.42
MMP1P03956 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.09□□□□□ -2.42
MMP1P03956 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.09□□□□□ -2.42
MMP1P03956 Y_RNA.343-201ENST00000365354 112 ntBASIC-0.09□□□□□ -2.42
MMP1P03956 RNU6-652P-201ENST00000365488 107 ntBASIC-0.09□□□□□ -2.42
MMP1P03956 MIR617-201ENST00000385030 97 ntBASIC-0.09□□□□□ -2.42
MMP1P03956 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.09□□□□□ -2.42
MMP1P03956 Y_RNA.586-201ENST00000391146 98 ntBASIC-0.09□□□□□ -2.42
MMP1P03956 MIR548I1-201ENST00000408810 149 ntBASIC-0.09□□□□□ -2.42
MMP1P03956 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.09□□□□□ -2.42
MMP1P03956 RNU6-971P-201ENST00000516920 106 ntBASIC-0.09□□□□□ -2.42
MMP1P03956 MIR3671-201ENST00000580455 88 ntBASIC-0.09□□□□□ -2.42
MMP1P03956 AL442128.1-201ENST00000615151 90 ntBASIC-0.09□□□□□ -2.42
MMP1P03956 TRDV1-202ENST00000621643 102 ntBASIC-0.09□□□□□ -2.42
MMP1P03956 U6.100-201ENST00000636230 99 ntBASIC-0.09□□□□□ -2.42
MMP1P03956 RNU6-929P-201ENST00000384429 107 ntBASIC-0.1□□□□□ -2.43
MMP1P03956 Y_RNA.507-201ENST00000384500 99 ntBASIC-0.1□□□□□ -2.43
MMP1P03956 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-0.1□□□□□ -2.43
MMP1P03956 RNU7-165P-201ENST00000458864 60 ntBASIC-0.1□□□□□ -2.43
MMP1P03956 MIR2113-201ENST00000459007 91 ntBASIC-0.1□□□□□ -2.43
MMP1P03956 RNU6-1211P-201ENST00000459179 105 ntBASIC-0.1□□□□□ -2.43
MMP1P03956 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.1□□□□□ -2.43
MMP1P03956 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.1□□□□□ -2.43
MMP1P03956 IGLVI-20-201ENST00000519296 130 ntBASIC-0.1□□□□□ -2.43
MMP1P03956 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-0.1□□□□□ -2.43
MMP1P03956 AL157777.2-201ENST00000258070 137 ntBASIC-0.11□□□□□ -2.43
MMP1P03956 RNU6-957P-201ENST00000363652 99 ntBASIC-0.11□□□□□ -2.43
MMP1P03956 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.11□□□□□ -2.43
MMP1P03956 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.11□□□□□ -2.43
MMP1P03956 SNORD115-44-201ENST00000365391 82 ntBASIC-0.11□□□□□ -2.43
MMP1P03956 RNU6-907P-201ENST00000390924 102 ntBASIC-0.11□□□□□ -2.43
MMP1P03956 RNU6-243P-201ENST00000391140 107 ntBASIC-0.11□□□□□ -2.43
MMP1P03956 MIR892B-201ENST00000401279 77 ntBASIC-0.11□□□□□ -2.43
MMP1P03956 Z95118.1-201ENST00000421372 247 ntBASIC-0.11□□□□□ -2.43
MMP1P03956 RNU7-74P-201ENST00000459104 62 ntBASIC-0.11□□□□□ -2.43
MMP1P03956 RNU6-287P-201ENST00000516230 98 ntBASIC-0.11□□□□□ -2.43
MMP1P03956 SNORA25.13-201ENST00000516395 103 ntBASIC-0.11□□□□□ -2.43
MMP1P03956 RNU6-180P-201ENST00000516697 61 ntBASIC-0.11□□□□□ -2.43
MMP1P03956 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.11□□□□□ -2.43
MMP1P03956 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.11□□□□□ -2.43
MMP1P03956 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.12□□□□□ -2.43
MMP1P03956 SNORA51.5-201ENST00000384126 131 ntBASIC-0.12□□□□□ -2.43
MMP1P03956 MIR577-201ENST00000385196 96 ntBASIC-0.12□□□□□ -2.43
MMP1P03956 MIR876-201ENST00000401147 81 ntBASIC-0.12□□□□□ -2.43
MMP1P03956 RNA5SP163-201ENST00000410304 99 ntBASIC-0.12□□□□□ -2.43
MMP1P03956 MIR4679-2-201ENST00000578358 77 ntBASIC-0.12□□□□□ -2.43
MMP1P03956 RNU6V-201ENST00000384105 107 ntBASIC-0.13□□□□□ -2.43
MMP1P03956 RNA5SP25-201ENST00000410815 110 ntBASIC-0.13□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 217.7 ms