Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 VTRNA1-3-201ENST00000365645 89 ntBASIC0.92□□□□□ -2.26
COL2A1P02458 MIR563-201ENST00000385080 79 ntBASIC0.92□□□□□ -2.26
COL2A1P02458 AL450471.1-201ENST00000447509 127 ntBASIC0.92□□□□□ -2.26
COL2A1P02458 SNORD4B-201ENST00000459083 72 ntBASIC0.92□□□□□ -2.26
COL2A1P02458 MIR2115-201ENST00000516657 100 ntBASIC0.92□□□□□ -2.26
COL2A1P02458 AP003716.2-201ENST00000528260 108 ntBASIC0.92□□□□□ -2.26
COL2A1P02458 MIR3664-201ENST00000579074 99 ntBASIC0.92□□□□□ -2.26
COL2A1P02458 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.92□□□□□ -2.26
COL2A1P02458 AC008163.1-202ENST00000636004 2889 ntBASIC0.92□□□□□ -2.26
COL2A1P02458 MIRLET7F1-201ENST00000362202 87 ntBASIC0.92□□□□□ -2.26
COL2A1P02458 Y_RNA.13-201ENST00000362403 112 ntBASIC0.92□□□□□ -2.26
COL2A1P02458 Y_RNA.316-201ENST00000365118 111 ntBASIC0.92□□□□□ -2.26
COL2A1P02458 RNU1-36P-201ENST00000365130 165 ntBASIC0.92□□□□□ -2.26
COL2A1P02458 RNU6-934P-201ENST00000365154 107 ntBASIC0.92□□□□□ -2.26
COL2A1P02458 Y_RNA.363-201ENST00000365529 113 ntBASIC0.92□□□□□ -2.26
COL2A1P02458 RNA5SP292-201ENST00000390974 118 ntBASIC0.92□□□□□ -2.26
COL2A1P02458 Y_RNA.588-201ENST00000391254 102 ntBASIC0.92□□□□□ -2.26
COL2A1P02458 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.92□□□□□ -2.26
COL2A1P02458 RPL30P7-201ENST00000479312 323 ntBASIC0.92□□□□□ -2.26
COL2A1P02458 AC093729.1-201ENST00000513074 128 ntBASIC0.92□□□□□ -2.26
COL2A1P02458 RNU6-351P-201ENST00000516097 100 ntBASIC0.92□□□□□ -2.26
COL2A1P02458 MIR4264-201ENST00000583520 66 ntBASIC0.92□□□□□ -2.26
COL2A1P02458 MIR4536-1-201ENST00000583537 88 ntBASIC0.92□□□□□ -2.26
COL2A1P02458 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.92□□□□□ -2.26
COL2A1P02458 SNORD36A-201ENST00000362874 73 ntBASIC0.91□□□□□ -2.26
COL2A1P02458 Y_RNA.94-201ENST00000363068 106 ntBASIC0.91□□□□□ -2.26
COL2A1P02458 RNU6-957P-201ENST00000363652 99 ntBASIC0.91□□□□□ -2.26
COL2A1P02458 RNU6-132P-201ENST00000383863 107 ntBASIC0.91□□□□□ -2.26
COL2A1P02458 SNORA75.2-201ENST00000391138 150 ntBASIC0.91□□□□□ -2.26
COL2A1P02458 SNORD90-201ENST00000391145 111 ntBASIC0.91□□□□□ -2.26
COL2A1P02458 SNORA75.3-201ENST00000391231 150 ntBASIC0.91□□□□□ -2.26
COL2A1P02458 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.91□□□□□ -2.26
COL2A1P02458 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.91□□□□□ -2.26
COL2A1P02458 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.91□□□□□ -2.26
COL2A1P02458 AL606490.4-201ENST00000423117 127 ntBASIC0.91□□□□□ -2.26
COL2A1P02458 RNU7-195P-201ENST00000458793 62 ntBASIC0.91□□□□□ -2.26
COL2A1P02458 RNU7-185P-201ENST00000459215 60 ntBASIC0.91□□□□□ -2.26
COL2A1P02458 TRAJ51-201ENST00000504127 63 ntBASIC0.91□□□□□ -2.26
COL2A1P02458 RN7SKP88-201ENST00000516847 250 ntBASIC0.91□□□□□ -2.26
COL2A1P02458 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.91□□□□□ -2.26
COL2A1P02458 AC138907.6-201ENST00000568401 126 ntBASIC0.91□□□□□ -2.26
COL2A1P02458 MIR4771-2-201ENST00000577758 74 ntBASIC0.91□□□□□ -2.26
COL2A1P02458 MIR4771-1-201ENST00000582617 74 ntBASIC0.91□□□□□ -2.26
COL2A1P02458 7SK.8-201ENST00000612110 250 ntBASIC0.91□□□□□ -2.26
COL2A1P02458 7SK.11-201ENST00000615477 250 ntBASIC0.91□□□□□ -2.26
COL2A1P02458 7SK.13-201ENST00000622040 250 ntBASIC0.91□□□□□ -2.26
COL2A1P02458 HSBP1P2-201ENST00000299671 229 ntBASIC0.9□□□□□ -2.27
COL2A1P02458 MIR302D-201ENST00000362275 68 ntBASIC0.9□□□□□ -2.27
COL2A1P02458 MIR30A-201ENST00000385092 71 ntBASIC0.9□□□□□ -2.27
COL2A1P02458 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.9□□□□□ -2.27
COL2A1P02458 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
COL2A1P02458 RNU6-1052P-201ENST00000411398 104 ntBASIC0.9□□□□□ -2.27
COL2A1P02458 RPS27P16-201ENST00000425758 201 ntBASIC0.9□□□□□ -2.27
COL2A1P02458 SNORA31.2-201ENST00000516019 134 ntBASIC0.9□□□□□ -2.27
COL2A1P02458 SNORA25.13-201ENST00000516395 103 ntBASIC0.9□□□□□ -2.27
COL2A1P02458 RNU6-719P-201ENST00000516671 104 ntBASIC0.9□□□□□ -2.27
COL2A1P02458 SNORA44.1-201ENST00000517031 108 ntBASIC0.9□□□□□ -2.27
COL2A1P02458 AL512310.8-201ENST00000550183 120 ntBASIC0.9□□□□□ -2.27
COL2A1P02458 RNA5SP245-201ENST00000364239 121 ntBASIC0.89□□□□□ -2.27
COL2A1P02458 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
COL2A1P02458 Y_RNA.607-201ENST00000410597 98 ntBASIC0.89□□□□□ -2.27
COL2A1P02458 SNORD63B-201ENST00000411005 70 ntBASIC0.89□□□□□ -2.27
COL2A1P02458 RNU6-1054P-201ENST00000411293 104 ntBASIC0.89□□□□□ -2.27
COL2A1P02458 RNU6-1194P-201ENST00000516208 104 ntBASIC0.89□□□□□ -2.27
COL2A1P02458 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
COL2A1P02458 MIR101-2-201ENST00000362195 79 ntBASIC0.88□□□□□ -2.27
COL2A1P02458 RNU6-161P-201ENST00000363051 106 ntBASIC0.88□□□□□ -2.27
COL2A1P02458 SNORD115-37-201ENST00000363768 82 ntBASIC0.88□□□□□ -2.27
COL2A1P02458 RNU6-910P-201ENST00000390844 107 ntBASIC0.88□□□□□ -2.27
COL2A1P02458 RNU6-243P-201ENST00000391140 107 ntBASIC0.88□□□□□ -2.27
COL2A1P02458 SNORD100-201ENST00000408573 76 ntBASIC0.88□□□□□ -2.27
COL2A1P02458 SNRPGP12-201ENST00000449481 213 ntBASIC0.88□□□□□ -2.27
COL2A1P02458 RNU6-1108P-201ENST00000516308 104 ntBASIC0.88□□□□□ -2.27
COL2A1P02458 RNU7-40P-201ENST00000516397 64 ntBASIC0.88□□□□□ -2.27
COL2A1P02458 SNORA18.5-201ENST00000516616 101 ntBASIC0.88□□□□□ -2.27
COL2A1P02458 RNU11-2P-201ENST00000516898 142 ntBASIC0.88□□□□□ -2.27
COL2A1P02458 RNU7-156P-201ENST00000517214 74 ntBASIC0.88□□□□□ -2.27
COL2A1P02458 AC140658.3-201ENST00000567603 271 ntBASIC0.88□□□□□ -2.27
COL2A1P02458 RNU4-58P-201ENST00000363192 141 ntBASIC0.87□□□□□ -2.27
COL2A1P02458 RNU6-478P-201ENST00000363904 110 ntBASIC0.87□□□□□ -2.27
COL2A1P02458 SNORD113.3-201ENST00000364630 78 ntBASIC0.87□□□□□ -2.27
COL2A1P02458 Y_RNA.536-201ENST00000384621 113 ntBASIC0.87□□□□□ -2.27
COL2A1P02458 MIR635-201ENST00000384830 98 ntBASIC0.87□□□□□ -2.27
COL2A1P02458 MIR1236-201ENST00000408340 102 ntBASIC0.87□□□□□ -2.27
COL2A1P02458 AC098934.3-201ENST00000430450 190 ntBASIC0.87□□□□□ -2.27
COL2A1P02458 RNU6-65P-201ENST00000516332 98 ntBASIC0.87□□□□□ -2.27
COL2A1P02458 Y_RNA.697-201ENST00000516776 113 ntBASIC0.87□□□□□ -2.27
COL2A1P02458 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.87□□□□□ -2.27
COL2A1P02458 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.87□□□□□ -2.27
COL2A1P02458 RNU6-580P-201ENST00000365159 107 ntBASIC0.86□□□□□ -2.27
COL2A1P02458 SNORD26-201ENST00000384147 75 ntBASIC0.86□□□□□ -2.27
COL2A1P02458 RNU6-939P-201ENST00000384634 107 ntBASIC0.86□□□□□ -2.27
COL2A1P02458 RNU6-1254P-201ENST00000391266 104 ntBASIC0.86□□□□□ -2.27
COL2A1P02458 RNU6-279P-201ENST00000391297 101 ntBASIC0.86□□□□□ -2.27
COL2A1P02458 MIR1257-201ENST00000408490 117 ntBASIC0.86□□□□□ -2.27
COL2A1P02458 RNU6-75P-201ENST00000515944 104 ntBASIC0.86□□□□□ -2.27
COL2A1P02458 MIR4484-201ENST00000582855 83 ntBASIC0.86□□□□□ -2.27
COL2A1P02458 AC008608.1-201ENST00000603910 127 ntBASIC0.86□□□□□ -2.27
COL2A1P02458 RNU6-776P-201ENST00000364403 104 ntBASIC0.86□□□□□ -2.27
COL2A1P02458 RNU6-1022P-201ENST00000365049 104 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 216.4 ms