Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 MIR200A-201ENST00000384875 90 ntBASIC1.24□□□□□ -2.21
NPHS1O60500 MIR150-201ENST00000385048 84 ntBASIC1.24□□□□□ -2.21
NPHS1O60500 MIR1255A-201ENST00000408338 113 ntBASIC1.24□□□□□ -2.21
NPHS1O60500 RNU1-92P-201ENST00000517017 135 ntBASIC1.24□□□□□ -2.21
NPHS1O60500 MIR3064-201ENST00000581130 66 ntBASIC1.24□□□□□ -2.21
NPHS1O60500 ZNF209P-201ENST00000593450 2304 ntBASIC1.23□□□□□ -2.21
NPHS1O60500 RNU6-1335P-201ENST00000365426 107 ntBASIC1.23□□□□□ -2.21
NPHS1O60500 AC004223.1-201ENST00000479840 271 ntBASIC1.23□□□□□ -2.21
NPHS1O60500 SNORA18.5-201ENST00000516616 101 ntBASIC1.23□□□□□ -2.21
NPHS1O60500 AC140658.3-201ENST00000567603 271 ntBASIC1.23□□□□□ -2.21
NPHS1O60500 AC104996.3-201ENST00000590718 94 ntBASIC1.23□□□□□ -2.21
NPHS1O60500 U6.100-201ENST00000636230 99 ntBASIC1.23□□□□□ -2.21
NPHS1O60500 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
NPHS1O60500 Y_RNA.174-201ENST00000363781 105 ntBASIC1.22□□□□□ -2.21
NPHS1O60500 Y_RNA.338-201ENST00000365320 114 ntBASIC1.22□□□□□ -2.21
NPHS1O60500 SNORA40.6-201ENST00000391153 128 ntBASIC1.22□□□□□ -2.21
NPHS1O60500 SNORA17.3-201ENST00000391159 129 ntBASIC1.22□□□□□ -2.21
NPHS1O60500 RNA5SP225-201ENST00000410874 135 ntBASIC1.22□□□□□ -2.21
NPHS1O60500 AC002350.1-201ENST00000490759 375 ntBASIC1.22□□□□□ -2.21
NPHS1O60500 SNORA25.13-201ENST00000516395 103 ntBASIC1.22□□□□□ -2.21
NPHS1O60500 Y_RNA.685-201ENST00000516532 108 ntBASIC1.22□□□□□ -2.21
NPHS1O60500 MIR4796-201ENST00000580742 81 ntBASIC1.22□□□□□ -2.21
NPHS1O60500 MIR3660-201ENST00000584845 100 ntBASIC1.22□□□□□ -2.21
NPHS1O60500 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
NPHS1O60500 MIR378A-201ENST00000362177 66 ntBASIC1.21□□□□□ -2.22
NPHS1O60500 RNU1-124P-201ENST00000363861 145 ntBASIC1.21□□□□□ -2.22
NPHS1O60500 Y_RNA.316-201ENST00000365118 111 ntBASIC1.21□□□□□ -2.22
NPHS1O60500 RNU6-652P-201ENST00000365488 107 ntBASIC1.21□□□□□ -2.22
NPHS1O60500 MIR518E-201ENST00000385252 88 ntBASIC1.21□□□□□ -2.22
NPHS1O60500 MIR548U-201ENST00000390728 81 ntBASIC1.21□□□□□ -2.22
NPHS1O60500 RNU6-1265P-201ENST00000516342 103 ntBASIC1.21□□□□□ -2.22
NPHS1O60500 SNORD114-24-201ENST00000365029 72 ntBASIC1.2□□□□□ -2.22
NPHS1O60500 Y_RNA.491-201ENST00000384417 107 ntBASIC1.2□□□□□ -2.22
NPHS1O60500 MIR644A-201ENST00000385262 94 ntBASIC1.2□□□□□ -2.22
NPHS1O60500 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
NPHS1O60500 AC108667.1-201ENST00000428618 249 ntBASIC1.2□□□□□ -2.22
NPHS1O60500 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.2□□□□□ -2.22
NPHS1O60500 RNA5SP117-201ENST00000365294 118 ntBASIC1.19□□□□□ -2.22
NPHS1O60500 MIR4696-201ENST00000581431 70 ntBASIC1.19□□□□□ -2.22
NPHS1O60500 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.18□□□□□ -2.22
NPHS1O60500 SNORD115-24-201ENST00000363528 82 ntBASIC1.18□□□□□ -2.22
NPHS1O60500 SNORD101-201ENST00000384027 73 ntBASIC1.18□□□□□ -2.22
NPHS1O60500 RNU4-62P-201ENST00000410125 130 ntBASIC1.18□□□□□ -2.22
NPHS1O60500 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
NPHS1O60500 RNU6-664P-201ENST00000362381 107 ntBASIC1.17□□□□□ -2.22
NPHS1O60500 Y_RNA.596-201ENST00000410462 109 ntBASIC1.17□□□□□ -2.22
NPHS1O60500 RNA5SP255-201ENST00000516370 107 ntBASIC1.17□□□□□ -2.22
NPHS1O60500 MIR4421-201ENST00000578133 69 ntBASIC1.17□□□□□ -2.22
NPHS1O60500 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.17□□□□□ -2.22
NPHS1O60500 MTRNR2L2-201ENST00000604882 87 ntBASIC1.17□□□□□ -2.22
NPHS1O60500 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
NPHS1O60500 Y_RNA.239-201ENST00000364444 113 ntBASIC1.16□□□□□ -2.22
NPHS1O60500 SNORD90-201ENST00000391145 111 ntBASIC1.16□□□□□ -2.22
NPHS1O60500 RNA5SP395-201ENST00000516567 118 ntBASIC1.16□□□□□ -2.22
NPHS1O60500 RNU7-161P-201ENST00000517289 62 ntBASIC1.16□□□□□ -2.22
NPHS1O60500 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.16□□□□□ -2.22
NPHS1O60500 AC025627.3-201ENST00000582078 182 ntBASIC1.16□□□□□ -2.22
NPHS1O60500 MIR573-201ENST00000384964 99 ntBASIC1.15□□□□□ -2.23
NPHS1O60500 MIR1285-1-201ENST00000408593 84 ntBASIC1.15□□□□□ -2.23
NPHS1O60500 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.15□□□□□ -2.23
NPHS1O60500 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.15□□□□□ -2.23
NPHS1O60500 RNU7-95P-201ENST00000459222 64 ntBASIC1.15□□□□□ -2.23
NPHS1O60500 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
NPHS1O60500 RNU6-624P-201ENST00000363411 107 ntBASIC1.14□□□□□ -2.23
NPHS1O60500 RNA5SP403-201ENST00000363598 108 ntBASIC1.14□□□□□ -2.23
NPHS1O60500 AL450471.1-201ENST00000447509 127 ntBASIC1.14□□□□□ -2.23
NPHS1O60500 MIR3612-201ENST00000579753 87 ntBASIC1.14□□□□□ -2.23
NPHS1O60500 SNORA7.1-201ENST00000363750 139 ntBASIC1.13□□□□□ -2.23
NPHS1O60500 SNORD99-201ENST00000408612 74 ntBASIC1.13□□□□□ -2.23
NPHS1O60500 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
NPHS1O60500 RNU6-478P-201ENST00000363904 110 ntBASIC1.12□□□□□ -2.23
NPHS1O60500 Y_RNA.207-201ENST00000364142 106 ntBASIC1.12□□□□□ -2.23
NPHS1O60500 RNU6-129P-201ENST00000391022 107 ntBASIC1.12□□□□□ -2.23
NPHS1O60500 AP1B1P2-201ENST00000416196 106 ntBASIC1.12□□□□□ -2.23
NPHS1O60500 AL603825.1-201ENST00000438481 80 ntBASIC1.12□□□□□ -2.23
NPHS1O60500 RNU7-104P-201ENST00000459398 79 ntBASIC1.12□□□□□ -2.23
NPHS1O60500 RNU6-469P-201ENST00000516253 101 ntBASIC1.12□□□□□ -2.23
NPHS1O60500 RNU6-638P-201ENST00000516582 104 ntBASIC1.12□□□□□ -2.23
NPHS1O60500 SNORA63.2-201ENST00000362603 126 ntBASIC1.11□□□□□ -2.23
NPHS1O60500 Y_RNA.94-201ENST00000363068 106 ntBASIC1.11□□□□□ -2.23
NPHS1O60500 RNU6-279P-201ENST00000391297 101 ntBASIC1.11□□□□□ -2.23
NPHS1O60500 RNU6-1053P-201ENST00000515930 101 ntBASIC1.11□□□□□ -2.23
NPHS1O60500 RNU6-287P-201ENST00000516230 98 ntBASIC1.11□□□□□ -2.23
NPHS1O60500 RNU7-13P-201ENST00000516413 62 ntBASIC1.11□□□□□ -2.23
NPHS1O60500 AC011195.1-201ENST00000578177 177 ntBASIC1.11□□□□□ -2.23
NPHS1O60500 MIR3678-201ENST00000578455 94 ntBASIC1.11□□□□□ -2.23
NPHS1O60500 MIR4712-201ENST00000583750 82 ntBASIC1.11□□□□□ -2.23
NPHS1O60500 snoU13.31-201ENST00000607291 104 ntBASIC1.11□□□□□ -2.23
NPHS1O60500 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.11□□□□□ -2.23
NPHS1O60500 SNORD18A-201ENST00000363753 72 ntBASIC1.1□□□□□ -2.23
NPHS1O60500 RNU6-1051P-201ENST00000365471 102 ntBASIC1.1□□□□□ -2.23
NPHS1O60500 SNORD28-201ENST00000384706 75 ntBASIC1.1□□□□□ -2.23
NPHS1O60500 RNU6-935P-201ENST00000410371 100 ntBASIC1.1□□□□□ -2.23
NPHS1O60500 OR2A41P-201ENST00000473586 105 ntBASIC1.1□□□□□ -2.23
NPHS1O60500 RNU6-857P-201ENST00000515893 110 ntBASIC1.1□□□□□ -2.23
NPHS1O60500 RNU6-135P-201ENST00000516769 101 ntBASIC1.1□□□□□ -2.23
NPHS1O60500 MIR3920-201ENST00000581751 86 ntBASIC1.1□□□□□ -2.23
NPHS1O60500 AL353770.2-201ENST00000620024 78 ntBASIC1.1□□□□□ -2.23
NPHS1O60500 AC244669.1-204ENST00000621564 178 ntBASIC1.1□□□□□ -2.23
NPHS1O60500 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 200 ms