Protein–RNA interactions for Protein: A6NCS4

NKX2-6, Homeobox protein Nkx-2.6, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-6A6NCS4 RNU7-13P-201ENST00000516413 62 ntBASIC-0.05□□□□□ -2.42
NKX2-6A6NCS4 RNU6-255P-201ENST00000516957 105 ntBASIC-0.05□□□□□ -2.42
NKX2-6A6NCS4 MIR3925-201ENST00000584674 77 ntBASIC-0.05□□□□□ -2.42
NKX2-6A6NCS4 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.06□□□□□ -2.42
NKX2-6A6NCS4 SNORD114-31-201ENST00000363219 75 ntBASIC-0.06□□□□□ -2.42
NKX2-6A6NCS4 RNU6V-201ENST00000384105 107 ntBASIC-0.06□□□□□ -2.42
NKX2-6A6NCS4 RNU6-929P-201ENST00000384429 107 ntBASIC-0.06□□□□□ -2.42
NKX2-6A6NCS4 Y_RNA.525-201ENST00000384570 113 ntBASIC-0.06□□□□□ -2.42
NKX2-6A6NCS4 MIR106A-201ENST00000384870 81 ntBASIC-0.06□□□□□ -2.42
NKX2-6A6NCS4 MIR519A1-201ENST00000385257 85 ntBASIC-0.06□□□□□ -2.42
NKX2-6A6NCS4 AC006210.1-201ENST00000424882 111 ntBASIC-0.06□□□□□ -2.42
NKX2-6A6NCS4 HMGN2P22-201ENST00000427588 175 ntBASIC-0.06□□□□□ -2.42
NKX2-6A6NCS4 RNU7-200P-201ENST00000516105 62 ntBASIC-0.06□□□□□ -2.42
NKX2-6A6NCS4 RNU6-782P-201ENST00000516852 104 ntBASIC-0.06□□□□□ -2.42
NKX2-6A6NCS4 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.06□□□□□ -2.42
NKX2-6A6NCS4 MIR548AG2-201ENST00000581228 64 ntBASIC-0.06□□□□□ -2.42
NKX2-6A6NCS4 MIR4677-201ENST00000584153 80 ntBASIC-0.06□□□□□ -2.42
NKX2-6A6NCS4 AC025166.1-201ENST00000612411 163 ntBASIC-0.06□□□□□ -2.42
NKX2-6A6NCS4 AL627230.5-201ENST00000619807 58 ntBASIC-0.06□□□□□ -2.42
NKX2-6A6NCS4 MTND5P18-201ENST00000445624 1801 ntBASIC-0.06□□□□□ -2.42
NKX2-6A6NCS4 RNU6-363P-201ENST00000362895 105 ntBASIC-0.07□□□□□ -2.42
NKX2-6A6NCS4 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.07□□□□□ -2.42
NKX2-6A6NCS4 SNORD58C-201ENST00000365223 64 ntBASIC-0.07□□□□□ -2.42
NKX2-6A6NCS4 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.07□□□□□ -2.42
NKX2-6A6NCS4 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-0.07□□□□□ -2.42
NKX2-6A6NCS4 snoU13.19-201ENST00000459148 104 ntBASIC-0.07□□□□□ -2.42
NKX2-6A6NCS4 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.07□□□□□ -2.42
NKX2-6A6NCS4 RNU6-758P-201ENST00000516292 89 ntBASIC-0.07□□□□□ -2.42
NKX2-6A6NCS4 MIR548AD-201ENST00000584780 82 ntBASIC-0.07□□□□□ -2.42
NKX2-6A6NCS4 RNU6-302P-201ENST00000365249 107 ntBASIC-0.08□□□□□ -2.42
NKX2-6A6NCS4 RNU6-652P-201ENST00000365488 107 ntBASIC-0.08□□□□□ -2.42
NKX2-6A6NCS4 RNU6-756P-201ENST00000383997 107 ntBASIC-0.08□□□□□ -2.42
NKX2-6A6NCS4 SNORD38.2-201ENST00000384470 69 ntBASIC-0.08□□□□□ -2.42
NKX2-6A6NCS4 RNU6-257P-201ENST00000410238 98 ntBASIC-0.08□□□□□ -2.42
NKX2-6A6NCS4 RNA5SP163-201ENST00000410304 99 ntBASIC-0.08□□□□□ -2.42
NKX2-6A6NCS4 RNU6-1211P-201ENST00000459179 105 ntBASIC-0.08□□□□□ -2.42
NKX2-6A6NCS4 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.08□□□□□ -2.42
NKX2-6A6NCS4 MIR892B-201ENST00000401279 77 ntBASIC-0.09□□□□□ -2.42
NKX2-6A6NCS4 MIR548G-201ENST00000408442 89 ntBASIC-0.09□□□□□ -2.42
NKX2-6A6NCS4 AP001180.6-201ENST00000584918 159 ntBASIC-0.09□□□□□ -2.42
NKX2-6A6NCS4 RNU6-90P-201ENST00000606352 106 ntBASIC-0.09□□□□□ -2.42
NKX2-6A6NCS4 AC073869.9-201ENST00000641610 120 ntBASIC-0.09□□□□□ -2.42
NKX2-6A6NCS4 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.1□□□□□ -2.43
NKX2-6A6NCS4 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.1□□□□□ -2.43
NKX2-6A6NCS4 SNORD36A-201ENST00000362874 73 ntBASIC-0.1□□□□□ -2.43
NKX2-6A6NCS4 RNU1-141P-201ENST00000364623 158 ntBASIC-0.1□□□□□ -2.43
NKX2-6A6NCS4 RNY4P3-201ENST00000365254 95 ntBASIC-0.1□□□□□ -2.43
NKX2-6A6NCS4 RNU6-409P-201ENST00000384114 104 ntBASIC-0.1□□□□□ -2.43
NKX2-6A6NCS4 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.1□□□□□ -2.43
NKX2-6A6NCS4 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.1□□□□□ -2.43
NKX2-6A6NCS4 MIR519E-201ENST00000385075 84 ntBASIC-0.1□□□□□ -2.43
NKX2-6A6NCS4 MIR214-201ENST00000385214 110 ntBASIC-0.1□□□□□ -2.43
NKX2-6A6NCS4 RNU6-816P-201ENST00000390914 107 ntBASIC-0.1□□□□□ -2.43
NKX2-6A6NCS4 RNU6-1268P-201ENST00000391214 107 ntBASIC-0.1□□□□□ -2.43
NKX2-6A6NCS4 RNU6-1239P-201ENST00000391310 107 ntBASIC-0.1□□□□□ -2.43
NKX2-6A6NCS4 RNU7-107P-201ENST00000459121 61 ntBASIC-0.1□□□□□ -2.43
NKX2-6A6NCS4 RNU6-794P-201ENST00000517261 64 ntBASIC-0.1□□□□□ -2.43
NKX2-6A6NCS4 MIR4473-201ENST00000583731 91 ntBASIC-0.1□□□□□ -2.43
NKX2-6A6NCS4 MIR4493-201ENST00000584016 73 ntBASIC-0.1□□□□□ -2.43
NKX2-6A6NCS4 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.11□□□□□ -2.43
NKX2-6A6NCS4 RNU6-509P-201ENST00000363519 107 ntBASIC-0.11□□□□□ -2.43
NKX2-6A6NCS4 RNU6-957P-201ENST00000363652 99 ntBASIC-0.11□□□□□ -2.43
NKX2-6A6NCS4 RNY4P6-201ENST00000363667 96 ntBASIC-0.11□□□□□ -2.43
NKX2-6A6NCS4 Y_RNA.180-201ENST00000363867 113 ntBASIC-0.11□□□□□ -2.43
NKX2-6A6NCS4 SNORD114-15-201ENST00000364687 72 ntBASIC-0.11□□□□□ -2.43
NKX2-6A6NCS4 Y_RNA.506-201ENST00000384494 102 ntBASIC-0.11□□□□□ -2.43
NKX2-6A6NCS4 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.11□□□□□ -2.43
NKX2-6A6NCS4 RNU6-243P-201ENST00000391140 107 ntBASIC-0.11□□□□□ -2.43
NKX2-6A6NCS4 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.11□□□□□ -2.43
NKX2-6A6NCS4 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-0.11□□□□□ -2.43
NKX2-6A6NCS4 RNU6-772P-201ENST00000516042 105 ntBASIC-0.11□□□□□ -2.43
NKX2-6A6NCS4 RNU6-971P-201ENST00000516920 106 ntBASIC-0.11□□□□□ -2.43
NKX2-6A6NCS4 MIR4645-201ENST00000583158 77 ntBASIC-0.11□□□□□ -2.43
NKX2-6A6NCS4 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.11□□□□□ -2.43
NKX2-6A6NCS4 TRDV1-202ENST00000621643 102 ntBASIC-0.11□□□□□ -2.43
NKX2-6A6NCS4 U6.100-201ENST00000636230 99 ntBASIC-0.11□□□□□ -2.43
NKX2-6A6NCS4 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.12□□□□□ -2.43
NKX2-6A6NCS4 Y_RNA.507-201ENST00000384500 99 ntBASIC-0.12□□□□□ -2.43
NKX2-6A6NCS4 MIR604-201ENST00000384880 94 ntBASIC-0.12□□□□□ -2.43
NKX2-6A6NCS4 MIR516B1-201ENST00000385211 90 ntBASIC-0.12□□□□□ -2.43
NKX2-6A6NCS4 SNORA40-201ENST00000388090 126 ntBASIC-0.12□□□□□ -2.43
NKX2-6A6NCS4 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.12□□□□□ -2.43
NKX2-6A6NCS4 RNU7-159P-201ENST00000459284 62 ntBASIC-0.12□□□□□ -2.43
NKX2-6A6NCS4 RNU6-287P-201ENST00000516230 98 ntBASIC-0.12□□□□□ -2.43
NKX2-6A6NCS4 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.12□□□□□ -2.43
NKX2-6A6NCS4 U7.6-201ENST00000610841 64 ntBASIC-0.12□□□□□ -2.43
NKX2-6A6NCS4 AC084368.1-201ENST00000620935 65 ntBASIC-0.12□□□□□ -2.43
NKX2-6A6NCS4 MIR1295B-201ENST00000636144 60 ntBASIC-0.12□□□□□ -2.43
NKX2-6A6NCS4 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.12□□□□□ -2.43
NKX2-6A6NCS4 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.13□□□□□ -2.43
NKX2-6A6NCS4 SNORD38.1-201ENST00000363863 68 ntBASIC-0.13□□□□□ -2.43
NKX2-6A6NCS4 RNA5SP368-201ENST00000364298 116 ntBASIC-0.13□□□□□ -2.43
NKX2-6A6NCS4 SNORA32.1-201ENST00000364514 115 ntBASIC-0.13□□□□□ -2.43
NKX2-6A6NCS4 Y_RNA.343-201ENST00000365354 112 ntBASIC-0.13□□□□□ -2.43
NKX2-6A6NCS4 SNORA51.5-201ENST00000384126 131 ntBASIC-0.13□□□□□ -2.43
NKX2-6A6NCS4 Y_RNA.464-201ENST00000384282 110 ntBASIC-0.13□□□□□ -2.43
NKX2-6A6NCS4 RNU6-907P-201ENST00000390924 102 ntBASIC-0.13□□□□□ -2.43
NKX2-6A6NCS4 MIR2113-201ENST00000459007 91 ntBASIC-0.13□□□□□ -2.43
NKX2-6A6NCS4 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.13□□□□□ -2.43
NKX2-6A6NCS4 AL035470.1-201ENST00000622571 220 ntBASIC-0.13□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms