Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 MIR504-201ENST00000385065 83 ntBASIC2.39□□□□□ -2.03
PCDHB3Q9Y5E6 RNU6ATAC33P-201ENST00000408647 126 ntBASIC2.39□□□□□ -2.03
PCDHB3Q9Y5E6 RNU1-41P-201ENST00000516161 162 ntBASIC2.39□□□□□ -2.03
PCDHB3Q9Y5E6 RNU1-48P-201ENST00000516400 162 ntBASIC2.39□□□□□ -2.03
PCDHB3Q9Y5E6 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.39□□□□□ -2.03
PCDHB3Q9Y5E6 AL359851.1-201ENST00000569460 4997 ntBASIC2.38□□□□□ -2.03
PCDHB3Q9Y5E6 RNU6-829P-201ENST00000363700 112 ntBASIC2.38□□□□□ -2.03
PCDHB3Q9Y5E6 IGLVVI-22-1-201ENST00000521183 211 ntBASIC2.38□□□□□ -2.03
PCDHB3Q9Y5E6 MIR7843-201ENST00000622274 79 ntBASIC2.38□□□□□ -2.03
PCDHB3Q9Y5E6 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
PCDHB3Q9Y5E6 RNA5SP432-201ENST00000362480 116 ntBASIC2.37□□□□□ -2.03
PCDHB3Q9Y5E6 RNA5SP456-201ENST00000364002 114 ntBASIC2.37□□□□□ -2.03
PCDHB3Q9Y5E6 SNORD113.3-201ENST00000364630 78 ntBASIC2.37□□□□□ -2.03
PCDHB3Q9Y5E6 SNORD115-44-201ENST00000365391 82 ntBASIC2.37□□□□□ -2.03
PCDHB3Q9Y5E6 MIR144-201ENST00000384886 86 ntBASIC2.37□□□□□ -2.03
PCDHB3Q9Y5E6 AL359511.1-201ENST00000402970 211 ntBASIC2.37□□□□□ -2.03
PCDHB3Q9Y5E6 SNORA3.2-201ENST00000408221 125 ntBASIC2.37□□□□□ -2.03
PCDHB3Q9Y5E6 SNORD75.2-201ENST00000408784 58 ntBASIC2.37□□□□□ -2.03
PCDHB3Q9Y5E6 AC244505.6-201ENST00000452829 130 ntBASIC2.37□□□□□ -2.03
PCDHB3Q9Y5E6 MIR5694-201ENST00000581190 76 ntBASIC2.37□□□□□ -2.03
PCDHB3Q9Y5E6 MIR8074-201ENST00000615081 81 ntBASIC2.37□□□□□ -2.03
PCDHB3Q9Y5E6 MIR8063-201ENST00000621930 81 ntBASIC2.37□□□□□ -2.03
PCDHB3Q9Y5E6 AC016717.2-201ENST00000609089 5141 ntBASIC2.37□□□□□ -2.03
PCDHB3Q9Y5E6 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
PCDHB3Q9Y5E6 Y_RNA.236-201ENST00000364427 111 ntBASIC2.36□□□□□ -2.03
PCDHB3Q9Y5E6 AL356320.1-201ENST00000429616 163 ntBASIC2.36□□□□□ -2.03
PCDHB3Q9Y5E6 MTND4LP1-201ENST00000446263 157 ntBASIC2.36□□□□□ -2.03
PCDHB3Q9Y5E6 MIR3664-201ENST00000579074 99 ntBASIC2.36□□□□□ -2.03
PCDHB3Q9Y5E6 AC008608.1-201ENST00000603910 127 ntBASIC2.36□□□□□ -2.03
PCDHB3Q9Y5E6 RNU6-668P-201ENST00000364180 107 ntBASIC2.35□□□□□ -2.03
PCDHB3Q9Y5E6 SNORA16B-201ENST00000364674 135 ntBASIC2.35□□□□□ -2.03
PCDHB3Q9Y5E6 AC036111.3-201ENST00000526389 112 ntBASIC2.35□□□□□ -2.03
PCDHB3Q9Y5E6 MIR3920-201ENST00000581751 86 ntBASIC2.35□□□□□ -2.03
PCDHB3Q9Y5E6 MIR6840-201ENST00000611937 71 ntBASIC2.35□□□□□ -2.03
PCDHB3Q9Y5E6 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
PCDHB3Q9Y5E6 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
PCDHB3Q9Y5E6 Y_RNA.330-201ENST00000365230 109 ntBASIC2.34□□□□□ -2.03
PCDHB3Q9Y5E6 MIR17-201ENST00000385012 84 ntBASIC2.34□□□□□ -2.03
PCDHB3Q9Y5E6 RNU7-24P-201ENST00000458867 62 ntBASIC2.34□□□□□ -2.03
PCDHB3Q9Y5E6 RPL23AP42-201ENST00000471152 471 ntBASIC2.34□□□□□ -2.03
PCDHB3Q9Y5E6 RNU6-542P-201ENST00000516405 103 ntBASIC2.34□□□□□ -2.03
PCDHB3Q9Y5E6 AC103810.8-201ENST00000607347 118 ntBASIC2.34□□□□□ -2.03
PCDHB3Q9Y5E6 AC092634.7-201ENST00000621022 103 ntBASIC2.34□□□□□ -2.03
PCDHB3Q9Y5E6 RNA5SP289-201ENST00000362332 137 ntBASIC2.33□□□□□ -2.04
PCDHB3Q9Y5E6 Y_RNA.375-201ENST00000365625 101 ntBASIC2.33□□□□□ -2.04
PCDHB3Q9Y5E6 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC2.33□□□□□ -2.04
PCDHB3Q9Y5E6 snoU13.15-201ENST00000459407 104 ntBASIC2.33□□□□□ -2.04
PCDHB3Q9Y5E6 RNU6-165P-201ENST00000517170 99 ntBASIC2.33□□□□□ -2.04
PCDHB3Q9Y5E6 MIR4287-201ENST00000579398 78 ntBASIC2.33□□□□□ -2.04
PCDHB3Q9Y5E6 MIR4648-201ENST00000580107 72 ntBASIC2.33□□□□□ -2.04
PCDHB3Q9Y5E6 AL773524.1-201ENST00000614065 229 ntBASIC2.33□□□□□ -2.04
PCDHB3Q9Y5E6 MIR21-201ENST00000362134 72 ntBASIC2.32□□□□□ -2.04
PCDHB3Q9Y5E6 MIR302D-201ENST00000362275 68 ntBASIC2.32□□□□□ -2.04
PCDHB3Q9Y5E6 RNU6-495P-201ENST00000362995 107 ntBASIC2.32□□□□□ -2.04
PCDHB3Q9Y5E6 RNU6-1039P-201ENST00000383931 107 ntBASIC2.32□□□□□ -2.04
PCDHB3Q9Y5E6 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.32□□□□□ -2.04
PCDHB3Q9Y5E6 RNU6-237P-201ENST00000515985 71 ntBASIC2.32□□□□□ -2.04
PCDHB3Q9Y5E6 MIR4524B-201ENST00000581569 115 ntBASIC2.32□□□□□ -2.04
PCDHB3Q9Y5E6 MIR4676-201ENST00000583078 72 ntBASIC2.32□□□□□ -2.04
PCDHB3Q9Y5E6 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
PCDHB3Q9Y5E6 RNU6-1079P-201ENST00000362861 110 ntBASIC2.31□□□□□ -2.04
PCDHB3Q9Y5E6 RNU6-364P-201ENST00000384387 107 ntBASIC2.31□□□□□ -2.04
PCDHB3Q9Y5E6 RPS26P5-201ENST00000418544 335 ntBASIC2.31□□□□□ -2.04
PCDHB3Q9Y5E6 RNU7-40P-201ENST00000516397 64 ntBASIC2.31□□□□□ -2.04
PCDHB3Q9Y5E6 RNU7-13P-201ENST00000516413 62 ntBASIC2.31□□□□□ -2.04
PCDHB3Q9Y5E6 AC019176.1-201ENST00000518519 225 ntBASIC2.31□□□□□ -2.04
PCDHB3Q9Y5E6 MIR6509-201ENST00000614603 85 ntBASIC2.31□□□□□ -2.04
PCDHB3Q9Y5E6 NAMPTP3-201ENST00000569273 224 ntBASIC2.3□□□□□ -2.04
PCDHB3Q9Y5E6 MIR548AG2-201ENST00000581228 64 ntBASIC2.3□□□□□ -2.04
PCDHB3Q9Y5E6 MIR4713-201ENST00000582691 75 ntBASIC2.3□□□□□ -2.04
PCDHB3Q9Y5E6 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.3□□□□□ -2.04
PCDHB3Q9Y5E6 MIR1291-201ENST00000627649 87 ntBASIC2.3□□□□□ -2.04
PCDHB3Q9Y5E6 AC073869.9-201ENST00000641610 120 ntBASIC2.3□□□□□ -2.04
PCDHB3Q9Y5E6 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
PCDHB3Q9Y5E6 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
PCDHB3Q9Y5E6 SNORA25.5-201ENST00000363782 126 ntBASIC2.29□□□□□ -2.04
PCDHB3Q9Y5E6 SNORD114-30-201ENST00000364448 72 ntBASIC2.29□□□□□ -2.04
PCDHB3Q9Y5E6 MIR6873-201ENST00000622788 63 ntBASIC2.29□□□□□ -2.04
PCDHB3Q9Y5E6 RNA5SP192-201ENST00000364404 120 ntBASIC2.28□□□□□ -2.04
PCDHB3Q9Y5E6 SNORD1A-201ENST00000364968 72 ntBASIC2.28□□□□□ -2.04
PCDHB3Q9Y5E6 RNU6-1126P-201ENST00000384002 107 ntBASIC2.28□□□□□ -2.04
PCDHB3Q9Y5E6 MIR203A-201ENST00000384836 110 ntBASIC2.28□□□□□ -2.04
PCDHB3Q9Y5E6 MIR938-201ENST00000401216 83 ntBASIC2.28□□□□□ -2.04
PCDHB3Q9Y5E6 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
PCDHB3Q9Y5E6 RNU7-102P-201ENST00000458948 62 ntBASIC2.28□□□□□ -2.04
PCDHB3Q9Y5E6 RNA5SP233-201ENST00000459153 113 ntBASIC2.28□□□□□ -2.04
PCDHB3Q9Y5E6 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.28□□□□□ -2.04
PCDHB3Q9Y5E6 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.28□□□□□ -2.04
PCDHB3Q9Y5E6 AC027335.2-201ENST00000624030 375 ntBASIC2.28□□□□□ -2.04
PCDHB3Q9Y5E6 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.28□□□□□ -2.05
PCDHB3Q9Y5E6 SNORA75.2-201ENST00000391138 150 ntBASIC2.27□□□□□ -2.05
PCDHB3Q9Y5E6 SNORA75.3-201ENST00000391231 150 ntBASIC2.27□□□□□ -2.05
PCDHB3Q9Y5E6 RN7SKP223-201ENST00000410582 62 ntBASIC2.27□□□□□ -2.05
PCDHB3Q9Y5E6 AL356379.1-201ENST00000414105 126 ntBASIC2.27□□□□□ -2.05
PCDHB3Q9Y5E6 MIR1273D-201ENST00000577266 86 ntBASIC2.27□□□□□ -2.05
PCDHB3Q9Y5E6 MIR466-201ENST00000580653 84 ntBASIC2.27□□□□□ -2.05
PCDHB3Q9Y5E6 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
PCDHB3Q9Y5E6 MIR216B-201ENST00000390186 82 ntBASIC2.26□□□□□ -2.05
PCDHB3Q9Y5E6 SNORD111-201ENST00000408139 94 ntBASIC2.26□□□□□ -2.05
PCDHB3Q9Y5E6 snoU13.9-201ENST00000458927 103 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 216.9 ms