Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 Y_RNA.818-201ENST00000618813 71 ntBASIC1.12□□□□□ -2.23
R3HCC1Q9Y3T6 RNU6-1244P-201ENST00000363614 108 ntBASIC1.11□□□□□ -2.23
R3HCC1Q9Y3T6 RNA5SP117-201ENST00000365294 118 ntBASIC1.11□□□□□ -2.23
R3HCC1Q9Y3T6 Y_RNA.342-201ENST00000365352 113 ntBASIC1.11□□□□□ -2.23
R3HCC1Q9Y3T6 MIR516A2-201ENST00000384888 90 ntBASIC1.11□□□□□ -2.23
R3HCC1Q9Y3T6 MIR516A1-201ENST00000385033 90 ntBASIC1.11□□□□□ -2.23
R3HCC1Q9Y3T6 Y_RNA.466-201ENST00000384294 113 ntBASIC1.1□□□□□ -2.23
R3HCC1Q9Y3T6 MIR644A-201ENST00000385262 94 ntBASIC1.1□□□□□ -2.23
R3HCC1Q9Y3T6 AC004941.2-201ENST00000427009 228 ntBASIC1.1□□□□□ -2.23
R3HCC1Q9Y3T6 MIR4439-201ENST00000583746 80 ntBASIC1.1□□□□□ -2.23
R3HCC1Q9Y3T6 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.1□□□□□ -2.23
R3HCC1Q9Y3T6 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
R3HCC1Q9Y3T6 Y_RNA.174-201ENST00000363781 105 ntBASIC1.09□□□□□ -2.23
R3HCC1Q9Y3T6 Y_RNA.495-201ENST00000384435 112 ntBASIC1.09□□□□□ -2.23
R3HCC1Q9Y3T6 Y_RNA.544-201ENST00000384650 113 ntBASIC1.09□□□□□ -2.23
R3HCC1Q9Y3T6 RNU7-10P-201ENST00000607194 63 ntBASIC1.09□□□□□ -2.23
R3HCC1Q9Y3T6 MIR18A-201ENST00000362310 71 ntBASIC1.08□□□□□ -2.24
R3HCC1Q9Y3T6 Y_RNA.57-201ENST00000362806 113 ntBASIC1.08□□□□□ -2.24
R3HCC1Q9Y3T6 Y_RNA.107-201ENST00000363190 121 ntBASIC1.08□□□□□ -2.24
R3HCC1Q9Y3T6 RNU6-32P-201ENST00000383948 107 ntBASIC1.08□□□□□ -2.24
R3HCC1Q9Y3T6 RNU6-13P-201ENST00000384248 107 ntBASIC1.08□□□□□ -2.24
R3HCC1Q9Y3T6 RNU6-12P-201ENST00000384604 107 ntBASIC1.08□□□□□ -2.24
R3HCC1Q9Y3T6 RNU6-41P-201ENST00000384741 107 ntBASIC1.08□□□□□ -2.24
R3HCC1Q9Y3T6 MIR181B2-201ENST00000385004 89 ntBASIC1.08□□□□□ -2.24
R3HCC1Q9Y3T6 RNU7-195P-201ENST00000458793 62 ntBASIC1.08□□□□□ -2.24
R3HCC1Q9Y3T6 AC138907.6-201ENST00000568401 126 ntBASIC1.08□□□□□ -2.24
R3HCC1Q9Y3T6 AC138869.1-201ENST00000568623 124 ntBASIC1.08□□□□□ -2.24
R3HCC1Q9Y3T6 AP001318.4-201ENST00000616637 121 ntBASIC1.08□□□□□ -2.24
R3HCC1Q9Y3T6 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.08□□□□□ -2.24
R3HCC1Q9Y3T6 RNA5SP222-201ENST00000411039 105 ntBASIC1.07□□□□□ -2.24
R3HCC1Q9Y3T6 Y_RNA.93-201ENST00000363066 109 ntBASIC1.06□□□□□ -2.24
R3HCC1Q9Y3T6 RNU4-38P-201ENST00000364472 129 ntBASIC1.06□□□□□ -2.24
R3HCC1Q9Y3T6 SNORA25.9-201ENST00000365087 128 ntBASIC1.06□□□□□ -2.24
R3HCC1Q9Y3T6 RNU6-813P-201ENST00000384691 107 ntBASIC1.06□□□□□ -2.24
R3HCC1Q9Y3T6 RNU6-644P-201ENST00000391155 98 ntBASIC1.06□□□□□ -2.24
R3HCC1Q9Y3T6 RNU7-61P-201ENST00000515897 61 ntBASIC1.06□□□□□ -2.24
R3HCC1Q9Y3T6 RNA5SP102-201ENST00000516865 106 ntBASIC1.06□□□□□ -2.24
R3HCC1Q9Y3T6 MIR3678-201ENST00000578455 94 ntBASIC1.06□□□□□ -2.24
R3HCC1Q9Y3T6 AC211469.2-201ENST00000605461 205 ntBASIC1.06□□□□□ -2.24
R3HCC1Q9Y3T6 AC103810.7-201ENST00000607821 91 ntBASIC1.06□□□□□ -2.24
R3HCC1Q9Y3T6 Y_RNA.348-201ENST00000365403 103 ntBASIC1.05□□□□□ -2.24
R3HCC1Q9Y3T6 RNY1P8-201ENST00000383970 114 ntBASIC1.05□□□□□ -2.24
R3HCC1Q9Y3T6 MIR499A-201ENST00000384903 122 ntBASIC1.05□□□□□ -2.24
R3HCC1Q9Y3T6 MIR519A1-201ENST00000385257 85 ntBASIC1.05□□□□□ -2.24
R3HCC1Q9Y3T6 AC244505.6-201ENST00000452829 130 ntBASIC1.05□□□□□ -2.24
R3HCC1Q9Y3T6 MIR7111-201ENST00000619751 72 ntBASIC1.05□□□□□ -2.24
R3HCC1Q9Y3T6 SNORD36A-201ENST00000362874 73 ntBASIC1.04□□□□□ -2.24
R3HCC1Q9Y3T6 SNORD114-27-201ENST00000363766 70 ntBASIC1.04□□□□□ -2.24
R3HCC1Q9Y3T6 RNA5SP89-201ENST00000410300 108 ntBASIC1.04□□□□□ -2.24
R3HCC1Q9Y3T6 MTATP8P2-201ENST00000435212 202 ntBASIC1.04□□□□□ -2.24
R3HCC1Q9Y3T6 RNU6-168P-201ENST00000516189 101 ntBASIC1.04□□□□□ -2.24
R3HCC1Q9Y3T6 AC025521.1-201ENST00000621624 286 ntBASIC1.04□□□□□ -2.24
R3HCC1Q9Y3T6 RNU6-1125P-201ENST00000363601 107 ntBASIC1.03□□□□□ -2.24
R3HCC1Q9Y3T6 RNU6-480P-201ENST00000384332 107 ntBASIC1.03□□□□□ -2.24
R3HCC1Q9Y3T6 MIR599-201ENST00000385069 95 ntBASIC1.03□□□□□ -2.24
R3HCC1Q9Y3T6 AC097635.1-201ENST00000450678 155 ntBASIC1.03□□□□□ -2.24
R3HCC1Q9Y3T6 PSMC1P5-201ENST00000512850 177 ntBASIC1.03□□□□□ -2.24
R3HCC1Q9Y3T6 Y_RNA.809-201ENST00000516058 95 ntBASIC1.03□□□□□ -2.24
R3HCC1Q9Y3T6 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.03□□□□□ -2.24
R3HCC1Q9Y3T6 MIR146A-201ENST00000385201 99 ntBASIC1.02□□□□□ -2.25
R3HCC1Q9Y3T6 RNU6-1254P-201ENST00000391266 104 ntBASIC1.02□□□□□ -2.25
R3HCC1Q9Y3T6 RNU6-158P-201ENST00000517104 100 ntBASIC1.02□□□□□ -2.25
R3HCC1Q9Y3T6 MIR6857-201ENST00000613267 93 ntBASIC1.02□□□□□ -2.25
R3HCC1Q9Y3T6 SNORD18A-201ENST00000363753 72 ntBASIC1.01□□□□□ -2.25
R3HCC1Q9Y3T6 RNU6-905P-201ENST00000384434 107 ntBASIC1.01□□□□□ -2.25
R3HCC1Q9Y3T6 MIR1276-201ENST00000408707 83 ntBASIC1.01□□□□□ -2.25
R3HCC1Q9Y3T6 Y_RNA.705-201ENST00000516862 110 ntBASIC1.01□□□□□ -2.25
R3HCC1Q9Y3T6 AL513043.2-201ENST00000573941 143 ntBASIC1.01□□□□□ -2.25
R3HCC1Q9Y3T6 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1□□□□□ -2.25
R3HCC1Q9Y3T6 RNU6-1260P-201ENST00000362944 107 ntBASIC1□□□□□ -2.25
R3HCC1Q9Y3T6 RNU6-640P-201ENST00000363693 105 ntBASIC1□□□□□ -2.25
R3HCC1Q9Y3T6 Y_RNA.224-201ENST00000364308 111 ntBASIC1□□□□□ -2.25
R3HCC1Q9Y3T6 RNU6-469P-201ENST00000516253 101 ntBASIC1□□□□□ -2.25
R3HCC1Q9Y3T6 SNORA40.13-201ENST00000516379 120 ntBASIC1□□□□□ -2.25
R3HCC1Q9Y3T6 MIR6504-201ENST00000613520 61 ntBASIC1□□□□□ -2.25
R3HCC1Q9Y3T6 Y_RNA.118-201ENST00000363300 101 ntBASIC0.99□□□□□ -2.25
R3HCC1Q9Y3T6 Y_RNA.191-201ENST00000363972 113 ntBASIC0.99□□□□□ -2.25
R3HCC1Q9Y3T6 Y_RNA.221-201ENST00000364248 96 ntBASIC0.99□□□□□ -2.25
R3HCC1Q9Y3T6 SNORA36.2-201ENST00000384004 127 ntBASIC0.99□□□□□ -2.25
R3HCC1Q9Y3T6 Y_RNA.508-201ENST00000384502 114 ntBASIC0.99□□□□□ -2.25
R3HCC1Q9Y3T6 MIR532-201ENST00000385025 91 ntBASIC0.99□□□□□ -2.25
R3HCC1Q9Y3T6 RNU6-243P-201ENST00000391140 107 ntBASIC0.99□□□□□ -2.25
R3HCC1Q9Y3T6 RNU6-887P-201ENST00000410660 100 ntBASIC0.99□□□□□ -2.25
R3HCC1Q9Y3T6 RNU6-162P-201ENST00000516228 103 ntBASIC0.99□□□□□ -2.25
R3HCC1Q9Y3T6 Y_RNA.677-201ENST00000516401 85 ntBASIC0.99□□□□□ -2.25
R3HCC1Q9Y3T6 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.99□□□□□ -2.25
R3HCC1Q9Y3T6 SNORD115-24-201ENST00000363528 82 ntBASIC0.98□□□□□ -2.25
R3HCC1Q9Y3T6 Y_RNA.355-201ENST00000365462 98 ntBASIC0.98□□□□□ -2.25
R3HCC1Q9Y3T6 RNU4-45P-201ENST00000365469 141 ntBASIC0.98□□□□□ -2.25
R3HCC1Q9Y3T6 SNORD28-201ENST00000384706 75 ntBASIC0.98□□□□□ -2.25
R3HCC1Q9Y3T6 RNU6-972P-201ENST00000391208 107 ntBASIC0.98□□□□□ -2.25
R3HCC1Q9Y3T6 RNU6-524P-201ENST00000384270 107 ntBASIC0.97□□□□□ -2.25
R3HCC1Q9Y3T6 RNU6-135P-201ENST00000516769 101 ntBASIC0.97□□□□□ -2.25
R3HCC1Q9Y3T6 RNU7-161P-201ENST00000517289 62 ntBASIC0.97□□□□□ -2.25
R3HCC1Q9Y3T6 U7.3-201ENST00000616123 62 ntBASIC0.97□□□□□ -2.25
R3HCC1Q9Y3T6 MIR96-201ENST00000362288 78 ntBASIC0.96□□□□□ -2.26
R3HCC1Q9Y3T6 SNORD58A-201ENST00000383875 65 ntBASIC0.96□□□□□ -2.26
R3HCC1Q9Y3T6 AL606490.4-201ENST00000423117 127 ntBASIC0.96□□□□□ -2.26
R3HCC1Q9Y3T6 AL161932.1-201ENST00000437408 146 ntBASIC0.96□□□□□ -2.26
R3HCC1Q9Y3T6 RNA5SP94-201ENST00000516917 108 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 230.3 ms