Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.26□□□□□ -2.05
HPS1Q92902 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.25□□□□□ -2.05
HPS1Q92902 SNORD83.1-201ENST00000411362 77 ntBASIC2.25□□□□□ -2.05
HPS1Q92902 SNORD53-201ENST00000579969 78 ntBASIC2.25□□□□□ -2.05
HPS1Q92902 MIR3938-201ENST00000582157 103 ntBASIC2.25□□□□□ -2.05
HPS1Q92902 MIR6817-201ENST00000615588 66 ntBASIC2.25□□□□□ -2.05
HPS1Q92902 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
HPS1Q92902 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
HPS1Q92902 RNA5SP68-201ENST00000363885 119 ntBASIC2.24□□□□□ -2.05
HPS1Q92902 RNU6-535P-201ENST00000384722 107 ntBASIC2.24□□□□□ -2.05
HPS1Q92902 RNA5SP282-201ENST00000516355 108 ntBASIC2.24□□□□□ -2.05
HPS1Q92902 SNORA77B-201ENST00000578179 125 ntBASIC2.24□□□□□ -2.05
HPS1Q92902 MIR6840-201ENST00000611937 71 ntBASIC2.24□□□□□ -2.05
HPS1Q92902 AC245884.12-201ENST00000615364 59 ntBASIC2.24□□□□□ -2.05
HPS1Q92902 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
HPS1Q92902 MIRLET7G-201ENST00000362280 84 ntBASIC2.23□□□□□ -2.05
HPS1Q92902 RNU6-645P-201ENST00000364649 106 ntBASIC2.23□□□□□ -2.05
HPS1Q92902 RNU6-934P-201ENST00000365154 107 ntBASIC2.23□□□□□ -2.05
HPS1Q92902 RNU6-122P-201ENST00000516818 107 ntBASIC2.23□□□□□ -2.05
HPS1Q92902 AC008608.1-201ENST00000603910 127 ntBASIC2.23□□□□□ -2.05
HPS1Q92902 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
HPS1Q92902 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
HPS1Q92902 RNA5SP215-201ENST00000363440 122 ntBASIC2.22□□□□□ -2.05
HPS1Q92902 SNORD113-4-201ENST00000364802 75 ntBASIC2.22□□□□□ -2.05
HPS1Q92902 RNU6-439P-201ENST00000384188 106 ntBASIC2.22□□□□□ -2.05
HPS1Q92902 RNA5SP299-201ENST00000391203 116 ntBASIC2.22□□□□□ -2.05
HPS1Q92902 AC079804.2-201ENST00000490376 200 ntBASIC2.22□□□□□ -2.05
HPS1Q92902 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
HPS1Q92902 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.21□□□□□ -2.06
HPS1Q92902 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
HPS1Q92902 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
HPS1Q92902 U8.2-201ENST00000363156 134 ntBASIC2.21□□□□□ -2.06
HPS1Q92902 RNU4-52P-201ENST00000384209 138 ntBASIC2.21□□□□□ -2.06
HPS1Q92902 RNA5SP212-201ENST00000391223 107 ntBASIC2.21□□□□□ -2.06
HPS1Q92902 NAMPTP3-201ENST00000569273 224 ntBASIC2.21□□□□□ -2.06
HPS1Q92902 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.21□□□□□ -2.06
HPS1Q92902 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC2.21□□□□□ -2.06
HPS1Q92902 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.21□□□□□ -2.06
HPS1Q92902 SNORD113.3-201ENST00000364630 78 ntBASIC2.2□□□□□ -2.06
HPS1Q92902 SNORA6-201ENST00000384033 151 ntBASIC2.2□□□□□ -2.06
HPS1Q92902 RNU7-13P-201ENST00000516413 62 ntBASIC2.2□□□□□ -2.06
HPS1Q92902 RNA5SP148-201ENST00000516527 94 ntBASIC2.2□□□□□ -2.06
HPS1Q92902 RNU7-193P-201ENST00000516723 65 ntBASIC2.2□□□□□ -2.06
HPS1Q92902 MIR3657-201ENST00000584818 117 ntBASIC2.2□□□□□ -2.06
HPS1Q92902 AP000553.5-201ENST00000641933 54 ntBASIC2.2□□□□□ -2.06
HPS1Q92902 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
HPS1Q92902 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
HPS1Q92902 SNORA3A-201ENST00000364113 130 ntBASIC2.19□□□□□ -2.06
HPS1Q92902 RNU6-1126P-201ENST00000384002 107 ntBASIC2.19□□□□□ -2.06
HPS1Q92902 MIR203A-201ENST00000384836 110 ntBASIC2.19□□□□□ -2.06
HPS1Q92902 MIR7-2-201ENST00000384970 110 ntBASIC2.19□□□□□ -2.06
HPS1Q92902 MIR4771-2-201ENST00000577758 74 ntBASIC2.19□□□□□ -2.06
HPS1Q92902 MIR4771-1-201ENST00000582617 74 ntBASIC2.19□□□□□ -2.06
HPS1Q92902 HMGN2P38-201ENST00000423806 265 ntBASIC2.18□□□□□ -2.06
HPS1Q92902 MIR3664-201ENST00000579074 99 ntBASIC2.18□□□□□ -2.06
HPS1Q92902 MIR548AG2-201ENST00000581228 64 ntBASIC2.18□□□□□ -2.06
HPS1Q92902 RNU6-92P-201ENST00000605893 104 ntBASIC2.18□□□□□ -2.06
HPS1Q92902 MIR548O2-201ENST00000616090 70 ntBASIC2.18□□□□□ -2.06
HPS1Q92902 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.17□□□□□ -2.06
HPS1Q92902 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.17□□□□□ -2.06
HPS1Q92902 SNORA70B-201ENST00000384210 135 ntBASIC2.17□□□□□ -2.06
HPS1Q92902 SNORA67.3-201ENST00000384366 140 ntBASIC2.17□□□□□ -2.06
HPS1Q92902 MIR27B-201ENST00000385129 97 ntBASIC2.17□□□□□ -2.06
HPS1Q92902 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
HPS1Q92902 RNA5SP24-201ENST00000516478 95 ntBASIC2.17□□□□□ -2.06
HPS1Q92902 AC104984.5-201ENST00000586878 94 ntBASIC2.17□□□□□ -2.06
HPS1Q92902 MIR21-201ENST00000362134 72 ntBASIC2.16□□□□□ -2.06
HPS1Q92902 RNU6-260P-201ENST00000384092 107 ntBASIC2.16□□□□□ -2.06
HPS1Q92902 SUMO2P12-201ENST00000405924 140 ntBASIC2.16□□□□□ -2.06
HPS1Q92902 AC036111.3-201ENST00000526389 112 ntBASIC2.16□□□□□ -2.06
HPS1Q92902 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.16□□□□□ -2.06
HPS1Q92902 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
HPS1Q92902 RNU6-302P-201ENST00000365249 107 ntBASIC2.15□□□□□ -2.07
HPS1Q92902 MIR617-201ENST00000385030 97 ntBASIC2.15□□□□□ -2.07
HPS1Q92902 AC104435.1-201ENST00000483483 166 ntBASIC2.15□□□□□ -2.07
HPS1Q92902 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
HPS1Q92902 RNA5SP403-201ENST00000363598 108 ntBASIC2.14□□□□□ -2.07
HPS1Q92902 RNA5SP37-201ENST00000365420 130 ntBASIC2.14□□□□□ -2.07
HPS1Q92902 RNU6-364P-201ENST00000384387 107 ntBASIC2.14□□□□□ -2.07
HPS1Q92902 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
HPS1Q92902 RPS26P5-201ENST00000418544 335 ntBASIC2.14□□□□□ -2.07
HPS1Q92902 AC008413.1-201ENST00000511864 177 ntBASIC2.14□□□□□ -2.07
HPS1Q92902 RNU6-1089P-201ENST00000516473 104 ntBASIC2.14□□□□□ -2.07
HPS1Q92902 MIR4676-201ENST00000583078 72 ntBASIC2.14□□□□□ -2.07
HPS1Q92902 MIR4448-201ENST00000584360 86 ntBASIC2.14□□□□□ -2.07
HPS1Q92902 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
HPS1Q92902 AC055731.1-201ENST00000474387 401 ntBASIC2.13□□□□□ -2.07
HPS1Q92902 RNU6-656P-201ENST00000516785 107 ntBASIC2.13□□□□□ -2.07
HPS1Q92902 MIR3124-201ENST00000582636 67 ntBASIC2.13□□□□□ -2.07
HPS1Q92902 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.13□□□□□ -2.07
HPS1Q92902 MIR8074-201ENST00000615081 81 ntBASIC2.13□□□□□ -2.07
HPS1Q92902 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
HPS1Q92902 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.13□□□□□ -2.07
HPS1Q92902 SNORD60.1-201ENST00000362451 73 ntBASIC2.12□□□□□ -2.07
HPS1Q92902 SNORA2.1-201ENST00000363089 137 ntBASIC2.12□□□□□ -2.07
HPS1Q92902 MIR938-201ENST00000401216 83 ntBASIC2.12□□□□□ -2.07
HPS1Q92902 AC027335.2-201ENST00000624030 375 ntBASIC2.12□□□□□ -2.07
HPS1Q92902 RNA5SP456-201ENST00000364002 114 ntBASIC2.11□□□□□ -2.07
HPS1Q92902 SNORD114-30-201ENST00000364448 72 ntBASIC2.11□□□□□ -2.07
HPS1Q92902 RNU6-54P-201ENST00000365563 107 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 267.7 ms