Protein–RNA interactions for Protein: Q8NEL0

CCDC54, Coiled-coil domain-containing protein 54, humanhuman

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54Q8NEL0 AL670379.3-201ENST00000605040 251 ntBASIC-0.25□□□□□ -2.45
CCDC54Q8NEL0 RNU6-379P-201ENST00000363813 104 ntBASIC-0.26□□□□□ -2.45
CCDC54Q8NEL0 Y_RNA.272-201ENST00000364696 102 ntBASIC-0.26□□□□□ -2.45
CCDC54Q8NEL0 Y_RNA.294-201ENST00000364916 102 ntBASIC-0.26□□□□□ -2.45
CCDC54Q8NEL0 RNU6-302P-201ENST00000365249 107 ntBASIC-0.26□□□□□ -2.45
CCDC54Q8NEL0 RNU6-571P-201ENST00000384128 107 ntBASIC-0.26□□□□□ -2.45
CCDC54Q8NEL0 MIR892B-201ENST00000401279 77 ntBASIC-0.26□□□□□ -2.45
CCDC54Q8NEL0 AC006210.1-201ENST00000424882 111 ntBASIC-0.26□□□□□ -2.45
CCDC54Q8NEL0 RNU7-120P-201ENST00000459334 63 ntBASIC-0.26□□□□□ -2.45
CCDC54Q8NEL0 RNU6-521P-201ENST00000516663 105 ntBASIC-0.26□□□□□ -2.45
CCDC54Q8NEL0 RNU7-6P-201ENST00000516845 62 ntBASIC-0.26□□□□□ -2.45
CCDC54Q8NEL0 RNU1-141P-201ENST00000364623 158 ntBASIC-0.27□□□□□ -2.45
CCDC54Q8NEL0 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.27□□□□□ -2.45
CCDC54Q8NEL0 SNORD18B-201ENST00000365659 72 ntBASIC-0.27□□□□□ -2.45
CCDC54Q8NEL0 Y_RNA.540-201ENST00000384638 111 ntBASIC-0.27□□□□□ -2.45
CCDC54Q8NEL0 MIR519E-201ENST00000385075 84 ntBASIC-0.27□□□□□ -2.45
CCDC54Q8NEL0 RNU6-138P-201ENST00000515952 107 ntBASIC-0.27□□□□□ -2.45
CCDC54Q8NEL0 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.27□□□□□ -2.45
CCDC54Q8NEL0 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.27□□□□□ -2.45
CCDC54Q8NEL0 RN7SL660P-201ENST00000614852 299 ntBASIC-0.27□□□□□ -2.45
CCDC54Q8NEL0 MIR6514-201ENST00000622549 70 ntBASIC-0.27□□□□□ -2.45
CCDC54Q8NEL0 Y_RNA.144-201ENST00000363521 113 ntBASIC-0.28□□□□□ -2.45
CCDC54Q8NEL0 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.28□□□□□ -2.45
CCDC54Q8NEL0 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.28□□□□□ -2.45
CCDC54Q8NEL0 SNORA25.13-201ENST00000516395 103 ntBASIC-0.28□□□□□ -2.45
CCDC54Q8NEL0 RNU7-13P-201ENST00000516413 62 ntBASIC-0.28□□□□□ -2.45
CCDC54Q8NEL0 RNA5SP457-201ENST00000363657 124 ntBASIC-0.29□□□□□ -2.46
CCDC54Q8NEL0 RNU6-915P-201ENST00000364943 103 ntBASIC-0.29□□□□□ -2.46
CCDC54Q8NEL0 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.29□□□□□ -2.46
CCDC54Q8NEL0 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-0.29□□□□□ -2.46
CCDC54Q8NEL0 AL161932.1-201ENST00000437408 146 ntBASIC-0.29□□□□□ -2.46
CCDC54Q8NEL0 U7.6-201ENST00000610841 64 ntBASIC-0.29□□□□□ -2.46
CCDC54Q8NEL0 AL109933.3-201ENST00000619095 188 ntBASIC-0.29□□□□□ -2.46
CCDC54Q8NEL0 AC021753.1-201ENST00000635724 168 ntBASIC-0.29□□□□□ -2.46
CCDC54Q8NEL0 MIR655-201ENST00000362159 97 ntBASIC-0.3□□□□□ -2.46
CCDC54Q8NEL0 Y_RNA.114-201ENST00000363265 113 ntBASIC-0.3□□□□□ -2.46
CCDC54Q8NEL0 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.3□□□□□ -2.46
CCDC54Q8NEL0 RNU6-509P-201ENST00000363519 107 ntBASIC-0.3□□□□□ -2.46
CCDC54Q8NEL0 MIR516B1-201ENST00000385211 90 ntBASIC-0.3□□□□□ -2.46
CCDC54Q8NEL0 RNU6-1234P-201ENST00000516877 103 ntBASIC-0.3□□□□□ -2.46
CCDC54Q8NEL0 RNU6-388P-201ENST00000517012 105 ntBASIC-0.3□□□□□ -2.46
CCDC54Q8NEL0 RNU6-389P-201ENST00000517048 105 ntBASIC-0.3□□□□□ -2.46
CCDC54Q8NEL0 CR383656.4-201ENST00000546909 122 ntBASIC-0.3□□□□□ -2.46
CCDC54Q8NEL0 MIR548AE1-201ENST00000583292 70 ntBASIC-0.3□□□□□ -2.46
CCDC54Q8NEL0 Y_RNA.205-201ENST00000364128 113 ntBASIC-0.31□□□□□ -2.46
CCDC54Q8NEL0 RNU6-151P-201ENST00000364158 107 ntBASIC-0.31□□□□□ -2.46
CCDC54Q8NEL0 RNU6-200P-201ENST00000364743 107 ntBASIC-0.31□□□□□ -2.46
CCDC54Q8NEL0 Y_RNA.401-201ENST00000383965 117 ntBASIC-0.31□□□□□ -2.46
CCDC54Q8NEL0 SNORA75.1-201ENST00000391130 148 ntBASIC-0.31□□□□□ -2.46
CCDC54Q8NEL0 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.31□□□□□ -2.46
CCDC54Q8NEL0 RN7SKP19-201ENST00000516016 252 ntBASIC-0.31□□□□□ -2.46
CCDC54Q8NEL0 SNORD36A-201ENST00000362874 73 ntBASIC-0.32□□□□□ -2.46
CCDC54Q8NEL0 RNU6-394P-201ENST00000410735 107 ntBASIC-0.32□□□□□ -2.46
CCDC54Q8NEL0 MIR4473-201ENST00000583731 91 ntBASIC-0.32□□□□□ -2.46
CCDC54Q8NEL0 MIR6507-201ENST00000613630 70 ntBASIC-0.32□□□□□ -2.46
CCDC54Q8NEL0 MIR2909-201ENST00000617113 69 ntBASIC-0.32□□□□□ -2.46
CCDC54Q8NEL0 Y_RNA.778-201ENST00000620203 90 ntBASIC-0.32□□□□□ -2.46
CCDC54Q8NEL0 AC084368.1-201ENST00000620935 65 ntBASIC-0.32□□□□□ -2.46
CCDC54Q8NEL0 U6.100-201ENST00000636230 99 ntBASIC-0.32□□□□□ -2.46
CCDC54Q8NEL0 Y_RNA.489-201ENST00000384410 101 ntBASIC-0.33□□□□□ -2.46
CCDC54Q8NEL0 MIR617-201ENST00000385030 97 ntBASIC-0.33□□□□□ -2.46
CCDC54Q8NEL0 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-0.33□□□□□ -2.46
CCDC54Q8NEL0 AC244250.2-201ENST00000418731 148 ntBASIC-0.33□□□□□ -2.46
CCDC54Q8NEL0 SNORD4A-201ENST00000459174 72 ntBASIC-0.33□□□□□ -2.46
CCDC54Q8NEL0 Y_RNA.662-201ENST00000516028 97 ntBASIC-0.33□□□□□ -2.46
CCDC54Q8NEL0 RNU6-781P-201ENST00000516377 101 ntBASIC-0.33□□□□□ -2.46
CCDC54Q8NEL0 MIR1295B-201ENST00000636144 60 ntBASIC-0.33□□□□□ -2.46
CCDC54Q8NEL0 AC109327.2-201ENST00000448339 378 ntBASIC-0.34□□□□□ -2.46
CCDC54Q8NEL0 MIR2113-201ENST00000459007 91 ntBASIC-0.34□□□□□ -2.46
CCDC54Q8NEL0 RNU6-287P-201ENST00000516230 98 ntBASIC-0.34□□□□□ -2.46
CCDC54Q8NEL0 RNU6-175P-201ENST00000516896 107 ntBASIC-0.34□□□□□ -2.46
CCDC54Q8NEL0 RNU6-1271P-201ENST00000517049 105 ntBASIC-0.34□□□□□ -2.46
CCDC54Q8NEL0 AC004792.1-201ENST00000614523 137 ntBASIC-0.34□□□□□ -2.46
CCDC54Q8NEL0 Y_RNA.198-201ENST00000364013 98 ntBASIC-0.35□□□□□ -2.47
CCDC54Q8NEL0 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.35□□□□□ -2.47
CCDC54Q8NEL0 SNORA51.5-201ENST00000384126 131 ntBASIC-0.35□□□□□ -2.47
CCDC54Q8NEL0 MIR214-201ENST00000385214 110 ntBASIC-0.35□□□□□ -2.47
CCDC54Q8NEL0 Y_RNA.580-201ENST00000391004 95 ntBASIC-0.35□□□□□ -2.47
CCDC54Q8NEL0 RNU7-188P-201ENST00000517063 64 ntBASIC-0.35□□□□□ -2.47
CCDC54Q8NEL0 YWHAEP2-201ENST00000580066 112 ntBASIC-0.35□□□□□ -2.47
CCDC54Q8NEL0 MIR3163-201ENST00000581592 73 ntBASIC-0.35□□□□□ -2.47
CCDC54Q8NEL0 AC069503.3-201ENST00000618674 145 ntBASIC-0.35□□□□□ -2.47
CCDC54Q8NEL0 MIR148A-201ENST00000362215 68 ntBASIC-0.36□□□□□ -2.47
CCDC54Q8NEL0 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.36□□□□□ -2.47
CCDC54Q8NEL0 SNORA18.1-201ENST00000363418 128 ntBASIC-0.36□□□□□ -2.47
CCDC54Q8NEL0 Y_RNA.188-201ENST00000363952 111 ntBASIC-0.36□□□□□ -2.47
CCDC54Q8NEL0 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.36□□□□□ -2.47
CCDC54Q8NEL0 SNORD114-12-201ENST00000365400 75 ntBASIC-0.36□□□□□ -2.47
CCDC54Q8NEL0 RNU6-46P-201ENST00000383860 107 ntBASIC-0.36□□□□□ -2.47
CCDC54Q8NEL0 RNU6-804P-201ENST00000384286 107 ntBASIC-0.36□□□□□ -2.47
CCDC54Q8NEL0 MIR329-2-201ENST00000385029 84 ntBASIC-0.36□□□□□ -2.47
CCDC54Q8NEL0 MIR1263-201ENST00000408324 86 ntBASIC-0.36□□□□□ -2.47
CCDC54Q8NEL0 SNORA7.5-201ENST00000410672 110 ntBASIC-0.36□□□□□ -2.47
CCDC54Q8NEL0 AC104692.1-201ENST00000472406 90 ntBASIC-0.36□□□□□ -2.47
CCDC54Q8NEL0 RNA5SP272-201ENST00000516095 111 ntBASIC-0.36□□□□□ -2.47
CCDC54Q8NEL0 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.36□□□□□ -2.47
CCDC54Q8NEL0 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.36□□□□□ -2.47
CCDC54Q8NEL0 AL353621.2-201ENST00000605340 133 ntBASIC-0.36□□□□□ -2.47
CCDC54Q8NEL0 TRDV1-202ENST00000621643 102 ntBASIC-0.36□□□□□ -2.47
CCDC54Q8NEL0 RNU6-957P-201ENST00000363652 99 ntBASIC-0.37□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 175.6 ms