Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 uc_338.10-201ENST00000621872 182 ntBASIC-0.62□□□□□ -2.51
CCDC50Q8IVM0 RNA5SP457-201ENST00000363657 124 ntBASIC-0.63□□□□□ -2.51
CCDC50Q8IVM0 MIR617-201ENST00000385030 97 ntBASIC-0.63□□□□□ -2.51
CCDC50Q8IVM0 SNORD37.2-201ENST00000391075 66 ntBASIC-0.63□□□□□ -2.51
CCDC50Q8IVM0 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.63□□□□□ -2.51
CCDC50Q8IVM0 RNU7-6P-201ENST00000516845 62 ntBASIC-0.63□□□□□ -2.51
CCDC50Q8IVM0 MIR3646-201ENST00000578301 84 ntBASIC-0.63□□□□□ -2.51
CCDC50Q8IVM0 Y_RNA.11-201ENST00000362375 109 ntBASIC-0.64□□□□□ -2.51
CCDC50Q8IVM0 AL161932.1-201ENST00000437408 146 ntBASIC-0.64□□□□□ -2.51
CCDC50Q8IVM0 RNU6-521P-201ENST00000516663 105 ntBASIC-0.64□□□□□ -2.51
CCDC50Q8IVM0 MIR4645-201ENST00000583158 77 ntBASIC-0.64□□□□□ -2.51
CCDC50Q8IVM0 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.65□□□□□ -2.51
CCDC50Q8IVM0 Y_RNA.83-201ENST00000363005 113 ntBASIC-0.65□□□□□ -2.51
CCDC50Q8IVM0 RNU6-1020P-201ENST00000363684 107 ntBASIC-0.65□□□□□ -2.51
CCDC50Q8IVM0 Y_RNA.251-201ENST00000364551 99 ntBASIC-0.65□□□□□ -2.51
CCDC50Q8IVM0 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.65□□□□□ -2.51
CCDC50Q8IVM0 SNORA51.5-201ENST00000384126 131 ntBASIC-0.65□□□□□ -2.51
CCDC50Q8IVM0 Y_RNA.478-201ENST00000384358 107 ntBASIC-0.65□□□□□ -2.51
CCDC50Q8IVM0 MIR329-2-201ENST00000385029 84 ntBASIC-0.65□□□□□ -2.51
CCDC50Q8IVM0 MTCYBP9-201ENST00000431021 303 ntBASIC-0.65□□□□□ -2.51
CCDC50Q8IVM0 MIR2113-201ENST00000459007 91 ntBASIC-0.65□□□□□ -2.51
CCDC50Q8IVM0 Y_RNA.812-201ENST00000610788 101 ntBASIC-0.65□□□□□ -2.51
CCDC50Q8IVM0 Y_RNA.784-201ENST00000613803 101 ntBASIC-0.65□□□□□ -2.51
CCDC50Q8IVM0 Y_RNA.787-201ENST00000616522 101 ntBASIC-0.65□□□□□ -2.51
CCDC50Q8IVM0 Y_RNA.780-201ENST00000617336 101 ntBASIC-0.65□□□□□ -2.51
CCDC50Q8IVM0 Y_RNA.801-201ENST00000619005 101 ntBASIC-0.65□□□□□ -2.51
CCDC50Q8IVM0 Y_RNA.200-201ENST00000364018 102 ntBASIC-0.66□□□□□ -2.52
CCDC50Q8IVM0 Y_RNA.233-201ENST00000364407 101 ntBASIC-0.66□□□□□ -2.52
CCDC50Q8IVM0 RNU6-239P-201ENST00000390990 99 ntBASIC-0.66□□□□□ -2.52
CCDC50Q8IVM0 RPS29P8-201ENST00000445109 171 ntBASIC-0.66□□□□□ -2.52
CCDC50Q8IVM0 RNU6-287P-201ENST00000516230 98 ntBASIC-0.66□□□□□ -2.52
CCDC50Q8IVM0 RNU6-175P-201ENST00000516896 107 ntBASIC-0.66□□□□□ -2.52
CCDC50Q8IVM0 MIR4460-201ENST00000577862 86 ntBASIC-0.66□□□□□ -2.52
CCDC50Q8IVM0 AC062037.2-201ENST00000610137 73 ntBASIC-0.66□□□□□ -2.52
CCDC50Q8IVM0 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.66□□□□□ -2.52
CCDC50Q8IVM0 SNORD114-11-201ENST00000363738 75 ntBASIC-0.67□□□□□ -2.52
CCDC50Q8IVM0 RNU7-121P-201ENST00000516604 62 ntBASIC-0.67□□□□□ -2.52
CCDC50Q8IVM0 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-0.67□□□□□ -2.52
CCDC50Q8IVM0 MIR4263-201ENST00000584745 83 ntBASIC-0.67□□□□□ -2.52
CCDC50Q8IVM0 AL590491.3-201ENST00000610731 82 ntBASIC-0.67□□□□□ -2.52
CCDC50Q8IVM0 AL391099.1-201ENST00000624635 187 ntBASIC-0.67□□□□□ -2.52
CCDC50Q8IVM0 SNORD114-31-201ENST00000363219 75 ntBASIC-0.68□□□□□ -2.52
CCDC50Q8IVM0 Y_RNA.133-201ENST00000363428 110 ntBASIC-0.68□□□□□ -2.52
CCDC50Q8IVM0 SNORA20.1-201ENST00000364790 130 ntBASIC-0.68□□□□□ -2.52
CCDC50Q8IVM0 SNORD115-44-201ENST00000365391 82 ntBASIC-0.68□□□□□ -2.52
CCDC50Q8IVM0 RNU6-154P-201ENST00000384306 106 ntBASIC-0.68□□□□□ -2.52
CCDC50Q8IVM0 AC114755.3-201ENST00000481111 251 ntBASIC-0.68□□□□□ -2.52
CCDC50Q8IVM0 RNU6-1023P-201ENST00000516137 106 ntBASIC-0.68□□□□□ -2.52
CCDC50Q8IVM0 IGKV1-22-201ENST00000524313 326 ntBASIC-0.68□□□□□ -2.52
CCDC50Q8IVM0 AC021753.1-201ENST00000635724 168 ntBASIC-0.68□□□□□ -2.52
CCDC50Q8IVM0 MIR1255B1-201ENST00000636325 63 ntBASIC-0.68□□□□□ -2.52
CCDC50Q8IVM0 SNORA63-201ENST00000363450 132 ntBASIC-0.69□□□□□ -2.52
CCDC50Q8IVM0 RNU4-84P-201ENST00000364200 139 ntBASIC-0.69□□□□□ -2.52
CCDC50Q8IVM0 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.69□□□□□ -2.52
CCDC50Q8IVM0 MIR539-201ENST00000365690 78 ntBASIC-0.69□□□□□ -2.52
CCDC50Q8IVM0 Y_RNA.447-201ENST00000384184 113 ntBASIC-0.69□□□□□ -2.52
CCDC50Q8IVM0 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.69□□□□□ -2.52
CCDC50Q8IVM0 DNAJC19P2-201ENST00000593340 302 ntBASIC-0.69□□□□□ -2.52
CCDC50Q8IVM0 TRDV1-202ENST00000621643 102 ntBASIC-0.69□□□□□ -2.52
CCDC50Q8IVM0 RNA5SP257-201ENST00000363023 116 ntBASIC-0.7□□□□□ -2.52
CCDC50Q8IVM0 RNA5SP98-201ENST00000363158 137 ntBASIC-0.7□□□□□ -2.52
CCDC50Q8IVM0 RNU6-480P-201ENST00000384332 107 ntBASIC-0.7□□□□□ -2.52
CCDC50Q8IVM0 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-0.7□□□□□ -2.52
CCDC50Q8IVM0 IGLVI-20-201ENST00000519296 130 ntBASIC-0.7□□□□□ -2.52
CCDC50Q8IVM0 MIR4432-201ENST00000581823 84 ntBASIC-0.7□□□□□ -2.52
CCDC50Q8IVM0 AC141273.2-201ENST00000618989 130 ntBASIC-0.7□□□□□ -2.52
CCDC50Q8IVM0 U6.100-201ENST00000636230 99 ntBASIC-0.7□□□□□ -2.52
CCDC50Q8IVM0 SNORD114-29-201ENST00000364819 70 ntBASIC-0.71□□□□□ -2.52
CCDC50Q8IVM0 SNORD36A-201ENST00000362874 73 ntBASIC-0.72□□□□□ -2.52
CCDC50Q8IVM0 SNORD115-19-201ENST00000363098 82 ntBASIC-0.72□□□□□ -2.52
CCDC50Q8IVM0 SNORD115-18-201ENST00000363293 82 ntBASIC-0.72□□□□□ -2.52
CCDC50Q8IVM0 SNORD115-17-201ENST00000364612 82 ntBASIC-0.72□□□□□ -2.52
CCDC50Q8IVM0 MT-TY-201ENST00000387409 66 ntBASIC-0.72□□□□□ -2.52
CCDC50Q8IVM0 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.72□□□□□ -2.52
CCDC50Q8IVM0 SNORD75.1-201ENST00000408373 60 ntBASIC-0.72□□□□□ -2.52
CCDC50Q8IVM0 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.72□□□□□ -2.52
CCDC50Q8IVM0 AC130289.1-201ENST00000577321 73 ntBASIC-0.72□□□□□ -2.52
CCDC50Q8IVM0 Y_RNA.307-201ENST00000365022 117 ntBASIC-0.73□□□□□ -2.53
CCDC50Q8IVM0 RNU6-1318P-201ENST00000365389 103 ntBASIC-0.73□□□□□ -2.53
CCDC50Q8IVM0 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.73□□□□□ -2.53
CCDC50Q8IVM0 MIR7-2-201ENST00000384970 110 ntBASIC-0.73□□□□□ -2.53
CCDC50Q8IVM0 MIR1302-3-201ENST00000408128 138 ntBASIC-0.73□□□□□ -2.53
CCDC50Q8IVM0 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.74□□□□□ -2.53
CCDC50Q8IVM0 Y_RNA.274-201ENST00000364714 101 ntBASIC-0.74□□□□□ -2.53
CCDC50Q8IVM0 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.74□□□□□ -2.53
CCDC50Q8IVM0 SNORD38.2-201ENST00000384470 69 ntBASIC-0.74□□□□□ -2.53
CCDC50Q8IVM0 RNU6-455P-201ENST00000384681 107 ntBASIC-0.74□□□□□ -2.53
CCDC50Q8IVM0 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.74□□□□□ -2.53
CCDC50Q8IVM0 RNU6-243P-201ENST00000391140 107 ntBASIC-0.74□□□□□ -2.53
CCDC50Q8IVM0 SNORA7.5-201ENST00000410672 110 ntBASIC-0.74□□□□□ -2.53
CCDC50Q8IVM0 AL118496.2-201ENST00000448300 230 ntBASIC-0.74□□□□□ -2.53
CCDC50Q8IVM0 MIR6759-201ENST00000638110 65 ntBASIC-0.74□□□□□ -2.53
CCDC50Q8IVM0 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.75□□□□□ -2.53
CCDC50Q8IVM0 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.75□□□□□ -2.53
CCDC50Q8IVM0 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.75□□□□□ -2.53
CCDC50Q8IVM0 RNU6-735P-201ENST00000410612 107 ntBASIC-0.75□□□□□ -2.53
CCDC50Q8IVM0 SPINT5P-201ENST00000448174 155 ntBASIC-0.75□□□□□ -2.53
CCDC50Q8IVM0 MIR3121-201ENST00000579680 77 ntBASIC-0.75□□□□□ -2.53
CCDC50Q8IVM0 MIR3163-201ENST00000581592 73 ntBASIC-0.75□□□□□ -2.53
CCDC50Q8IVM0 RNU6-957P-201ENST00000363652 99 ntBASIC-0.76□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 177.3 ms