Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 Y_RNA.190-201ENST00000363964 101 ntBASIC1.24□□□□□ -2.21
GFRA1P56159 RNU6-1134P-201ENST00000365156 101 ntBASIC1.24□□□□□ -2.21
GFRA1P56159 Y_RNA.558-201ENST00000384685 113 ntBASIC1.24□□□□□ -2.21
GFRA1P56159 RNU6-955P-201ENST00000410497 104 ntBASIC1.24□□□□□ -2.21
GFRA1P56159 AC092628.1-201ENST00000436250 252 ntBASIC1.24□□□□□ -2.21
GFRA1P56159 AC026421.1-201ENST00000519101 163 ntBASIC1.24□□□□□ -2.21
GFRA1P56159 AC025627.3-201ENST00000582078 182 ntBASIC1.24□□□□□ -2.21
GFRA1P56159 MIR519A1-201ENST00000385257 85 ntBASIC1.23□□□□□ -2.21
GFRA1P56159 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.22□□□□□ -2.21
GFRA1P56159 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.22□□□□□ -2.21
GFRA1P56159 Y_RNA.174-201ENST00000363781 105 ntBASIC1.22□□□□□ -2.21
GFRA1P56159 RNU6-321P-201ENST00000410912 106 ntBASIC1.22□□□□□ -2.21
GFRA1P56159 AC097635.1-201ENST00000450678 155 ntBASIC1.22□□□□□ -2.21
GFRA1P56159 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.22□□□□□ -2.21
GFRA1P56159 MIR337-201ENST00000362281 93 ntBASIC1.21□□□□□ -2.22
GFRA1P56159 RNU7-195P-201ENST00000458793 62 ntBASIC1.21□□□□□ -2.22
GFRA1P56159 RNU7-106P-201ENST00000459514 67 ntBASIC1.21□□□□□ -2.22
GFRA1P56159 Y_RNA.809-201ENST00000516058 95 ntBASIC1.21□□□□□ -2.22
GFRA1P56159 RNA5SP255-201ENST00000516370 107 ntBASIC1.21□□□□□ -2.22
GFRA1P56159 Y_RNA.676-201ENST00000516393 96 ntBASIC1.21□□□□□ -2.22
GFRA1P56159 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.21□□□□□ -2.22
GFRA1P56159 SNORD36A-201ENST00000362874 73 ntBASIC1.2□□□□□ -2.22
GFRA1P56159 Y_RNA.164-201ENST00000363709 102 ntBASIC1.2□□□□□ -2.22
GFRA1P56159 SNORD116-22-201ENST00000384430 92 ntBASIC1.2□□□□□ -2.22
GFRA1P56159 RNU6-939P-201ENST00000384634 107 ntBASIC1.2□□□□□ -2.22
GFRA1P56159 RNU1-123P-201ENST00000458950 160 ntBASIC1.2□□□□□ -2.22
GFRA1P56159 Y_RNA.648-201ENST00000459455 110 ntBASIC1.2□□□□□ -2.22
GFRA1P56159 TRMT112P2-201ENST00000512910 132 ntBASIC1.2□□□□□ -2.22
GFRA1P56159 RNA5SP61-201ENST00000516453 100 ntBASIC1.2□□□□□ -2.22
GFRA1P56159 MIR3660-201ENST00000584845 100 ntBASIC1.2□□□□□ -2.22
GFRA1P56159 MIR7974-201ENST00000615835 79 ntBASIC1.2□□□□□ -2.22
GFRA1P56159 AL353770.2-201ENST00000620024 78 ntBASIC1.2□□□□□ -2.22
GFRA1P56159 Y_RNA.4-201ENST00000362333 112 ntBASIC1.19□□□□□ -2.22
GFRA1P56159 RNA5SP117-201ENST00000365294 118 ntBASIC1.19□□□□□ -2.22
GFRA1P56159 RNU6-519P-201ENST00000410590 108 ntBASIC1.19□□□□□ -2.22
GFRA1P56159 Y_RNA.609-201ENST00000410669 89 ntBASIC1.19□□□□□ -2.22
GFRA1P56159 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.19□□□□□ -2.22
GFRA1P56159 AC004223.1-201ENST00000479840 271 ntBASIC1.19□□□□□ -2.22
GFRA1P56159 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.19□□□□□ -2.22
GFRA1P56159 RNU6-1260P-201ENST00000362944 107 ntBASIC1.18□□□□□ -2.22
GFRA1P56159 RNY1P10-201ENST00000363268 113 ntBASIC1.18□□□□□ -2.22
GFRA1P56159 MIR599-201ENST00000385069 95 ntBASIC1.18□□□□□ -2.22
GFRA1P56159 SNORA40.6-201ENST00000391153 128 ntBASIC1.18□□□□□ -2.22
GFRA1P56159 RNU6-466P-201ENST00000391224 103 ntBASIC1.18□□□□□ -2.22
GFRA1P56159 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.17□□□□□ -2.22
GFRA1P56159 Y_RNA.32-201ENST00000362589 110 ntBASIC1.17□□□□□ -2.22
GFRA1P56159 MIR758-201ENST00000390227 88 ntBASIC1.17□□□□□ -2.22
GFRA1P56159 AC002350.1-201ENST00000490759 375 ntBASIC1.17□□□□□ -2.22
GFRA1P56159 SNORA31.14-201ENST00000516728 116 ntBASIC1.17□□□□□ -2.22
GFRA1P56159 uc_338.16-201ENST00000621804 95 ntBASIC1.17□□□□□ -2.22
GFRA1P56159 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
GFRA1P56159 RNA5SP245-201ENST00000364239 121 ntBASIC1.16□□□□□ -2.22
GFRA1P56159 RNU6-392P-201ENST00000364926 101 ntBASIC1.16□□□□□ -2.22
GFRA1P56159 Y_RNA.327-201ENST00000365201 102 ntBASIC1.16□□□□□ -2.22
GFRA1P56159 RNU6-1335P-201ENST00000365426 107 ntBASIC1.16□□□□□ -2.22
GFRA1P56159 MIR573-201ENST00000384964 99 ntBASIC1.16□□□□□ -2.22
GFRA1P56159 AL161932.1-201ENST00000437408 146 ntBASIC1.16□□□□□ -2.22
GFRA1P56159 MIR150-201ENST00000385048 84 ntBASIC1.15□□□□□ -2.23
GFRA1P56159 AC244505.6-201ENST00000452829 130 ntBASIC1.15□□□□□ -2.23
GFRA1P56159 RNU6-469P-201ENST00000516253 101 ntBASIC1.15□□□□□ -2.23
GFRA1P56159 AC068338.1-201ENST00000565567 176 ntBASIC1.15□□□□□ -2.23
GFRA1P56159 MIR4668-201ENST00000582284 70 ntBASIC1.15□□□□□ -2.23
GFRA1P56159 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.15□□□□□ -2.23
GFRA1P56159 MIR4679-1-201ENST00000637619 75 ntBASIC1.15□□□□□ -2.23
GFRA1P56159 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.15□□□□□ -2.23
GFRA1P56159 Y_RNA.17-201ENST00000362433 111 ntBASIC1.14□□□□□ -2.23
GFRA1P56159 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
GFRA1P56159 RNY1P4-201ENST00000384595 115 ntBASIC1.14□□□□□ -2.23
GFRA1P56159 snoU13.11-201ENST00000459219 104 ntBASIC1.14□□□□□ -2.23
GFRA1P56159 RNU6-65P-201ENST00000516332 98 ntBASIC1.14□□□□□ -2.23
GFRA1P56159 RNU6-135P-201ENST00000516769 101 ntBASIC1.14□□□□□ -2.23
GFRA1P56159 MIR4661-201ENST00000582720 75 ntBASIC1.14□□□□□ -2.23
GFRA1P56159 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.14□□□□□ -2.23
GFRA1P56159 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
GFRA1P56159 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.13□□□□□ -2.23
GFRA1P56159 Y_RNA.283-201ENST00000364798 112 ntBASIC1.13□□□□□ -2.23
GFRA1P56159 RNU6-524P-201ENST00000384270 107 ntBASIC1.13□□□□□ -2.23
GFRA1P56159 SNORD99-201ENST00000408612 74 ntBASIC1.13□□□□□ -2.23
GFRA1P56159 MIR6078-201ENST00000611069 100 ntBASIC1.13□□□□□ -2.23
GFRA1P56159 MIR450A2-201ENST00000385022 100 ntBASIC1.12□□□□□ -2.23
GFRA1P56159 RNU6-402P-201ENST00000410678 103 ntBASIC1.12□□□□□ -2.23
GFRA1P56159 MIR3612-201ENST00000579753 87 ntBASIC1.12□□□□□ -2.23
GFRA1P56159 MIR4536-1-201ENST00000583537 88 ntBASIC1.12□□□□□ -2.23
GFRA1P56159 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.11□□□□□ -2.23
GFRA1P56159 SNORD73B-201ENST00000364394 72 ntBASIC1.11□□□□□ -2.23
GFRA1P56159 Y_RNA.593-201ENST00000410292 98 ntBASIC1.11□□□□□ -2.23
GFRA1P56159 SNORD4B-201ENST00000459083 72 ntBASIC1.11□□□□□ -2.23
GFRA1P56159 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.11□□□□□ -2.23
GFRA1P56159 AC011195.1-201ENST00000578177 177 ntBASIC1.11□□□□□ -2.23
GFRA1P56159 IGLL4P-201ENST00000614590 133 ntBASIC1.11□□□□□ -2.23
GFRA1P56159 TRDV1-202ENST00000621643 102 ntBASIC1.11□□□□□ -2.23
GFRA1P56159 RNU6-957P-201ENST00000363652 99 ntBASIC1.1□□□□□ -2.23
GFRA1P56159 RNY1P1-201ENST00000364372 112 ntBASIC1.1□□□□□ -2.23
GFRA1P56159 Y_RNA.620-201ENST00000411009 88 ntBASIC1.1□□□□□ -2.23
GFRA1P56159 RNU7-85P-201ENST00000458851 63 ntBASIC1.1□□□□□ -2.23
GFRA1P56159 SNORD115-24-201ENST00000363528 82 ntBASIC1.09□□□□□ -2.23
GFRA1P56159 Y_RNA.221-201ENST00000364248 96 ntBASIC1.09□□□□□ -2.23
GFRA1P56159 MIR1302-4-201ENST00000408701 150 ntBASIC1.09□□□□□ -2.23
GFRA1P56159 RNU6-762P-201ENST00000517107 102 ntBASIC1.09□□□□□ -2.23
GFRA1P56159 RNU6-1229P-201ENST00000364295 107 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 181.1 ms