Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.65□□□□□ -2.15
EPHB3P54753 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.64□□□□□ -2.15
EPHB3P54753 RNU6-957P-201ENST00000363652 99 ntBASIC1.64□□□□□ -2.15
EPHB3P54753 Y_RNA.264-201ENST00000364665 102 ntBASIC1.64□□□□□ -2.15
EPHB3P54753 SNORD77.2-201ENST00000391045 68 ntBASIC1.64□□□□□ -2.15
EPHB3P54753 RNU6-1108P-201ENST00000516308 104 ntBASIC1.64□□□□□ -2.15
EPHB3P54753 RNU7-10P-201ENST00000607194 63 ntBASIC1.64□□□□□ -2.15
EPHB3P54753 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
EPHB3P54753 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
EPHB3P54753 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
EPHB3P54753 SNORD33-201ENST00000362761 85 ntBASIC1.63□□□□□ -2.15
EPHB3P54753 Y_RNA.536-201ENST00000384621 113 ntBASIC1.63□□□□□ -2.15
EPHB3P54753 RNU7-185P-201ENST00000459215 60 ntBASIC1.63□□□□□ -2.15
EPHB3P54753 TRAJ51-201ENST00000504127 63 ntBASIC1.63□□□□□ -2.15
EPHB3P54753 AC114801.3-201ENST00000510231 177 ntBASIC1.63□□□□□ -2.15
EPHB3P54753 RNU6-165P-201ENST00000517170 99 ntBASIC1.63□□□□□ -2.15
EPHB3P54753 MIR548H5-201ENST00000580314 60 ntBASIC1.63□□□□□ -2.15
EPHB3P54753 MIR4285-201ENST00000581001 85 ntBASIC1.63□□□□□ -2.15
EPHB3P54753 MIR4422-201ENST00000581938 83 ntBASIC1.63□□□□□ -2.15
EPHB3P54753 MIRLET7F1-201ENST00000362202 87 ntBASIC1.62□□□□□ -2.15
EPHB3P54753 RNU6-403P-201ENST00000363163 104 ntBASIC1.62□□□□□ -2.15
EPHB3P54753 SNORD1A-201ENST00000364968 72 ntBASIC1.62□□□□□ -2.15
EPHB3P54753 MIR635-201ENST00000384830 98 ntBASIC1.62□□□□□ -2.15
EPHB3P54753 SNORA31.24-201ENST00000517232 57 ntBASIC1.62□□□□□ -2.15
EPHB3P54753 MIR3664-201ENST00000579074 99 ntBASIC1.62□□□□□ -2.15
EPHB3P54753 MIR3134-201ENST00000579433 74 ntBASIC1.62□□□□□ -2.15
EPHB3P54753 MIR6082-201ENST00000613604 109 ntBASIC1.62□□□□□ -2.15
EPHB3P54753 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.62□□□□□ -2.15
EPHB3P54753 MIR1297-201ENST00000637311 77 ntBASIC1.62□□□□□ -2.15
EPHB3P54753 MIR101-2-201ENST00000362195 79 ntBASIC1.61□□□□□ -2.15
EPHB3P54753 MIR337-201ENST00000362281 93 ntBASIC1.61□□□□□ -2.15
EPHB3P54753 Y_RNA.56-201ENST00000362798 112 ntBASIC1.61□□□□□ -2.15
EPHB3P54753 RNU6-1260P-201ENST00000362944 107 ntBASIC1.61□□□□□ -2.15
EPHB3P54753 RNU6-411P-201ENST00000384451 107 ntBASIC1.61□□□□□ -2.15
EPHB3P54753 RNU1-78P-201ENST00000391248 165 ntBASIC1.61□□□□□ -2.15
EPHB3P54753 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
EPHB3P54753 MIR1257-201ENST00000408490 117 ntBASIC1.61□□□□□ -2.15
EPHB3P54753 AC079140.2-201ENST00000506193 142 ntBASIC1.61□□□□□ -2.15
EPHB3P54753 RNU6-765P-201ENST00000516916 99 ntBASIC1.61□□□□□ -2.15
EPHB3P54753 MIR4781-201ENST00000585250 76 ntBASIC1.61□□□□□ -2.15
EPHB3P54753 AC013244.2-201ENST00000603396 103 ntBASIC1.61□□□□□ -2.15
EPHB3P54753 AL359821.1-201ENST00000605519 182 ntBASIC1.61□□□□□ -2.15
EPHB3P54753 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
EPHB3P54753 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.61□□□□□ -2.15
EPHB3P54753 AC023934.1-201ENST00000574529 2389 ntBASIC1.61□□□□□ -2.15
EPHB3P54753 RNU6-208P-201ENST00000362431 107 ntBASIC1.6□□□□□ -2.15
EPHB3P54753 RNU6-1065P-201ENST00000384513 106 ntBASIC1.6□□□□□ -2.15
EPHB3P54753 MIR1323-201ENST00000408090 73 ntBASIC1.6□□□□□ -2.15
EPHB3P54753 RNU6-321P-201ENST00000410912 106 ntBASIC1.6□□□□□ -2.15
EPHB3P54753 RNU7-195P-201ENST00000458793 62 ntBASIC1.6□□□□□ -2.15
EPHB3P54753 snoU13.21-201ENST00000459368 105 ntBASIC1.6□□□□□ -2.15
EPHB3P54753 TRMT112P2-201ENST00000512910 132 ntBASIC1.6□□□□□ -2.15
EPHB3P54753 RNU6-807P-201ENST00000516805 107 ntBASIC1.6□□□□□ -2.15
EPHB3P54753 RNU1-92P-201ENST00000517017 135 ntBASIC1.6□□□□□ -2.15
EPHB3P54753 AC019176.1-201ENST00000518519 225 ntBASIC1.6□□□□□ -2.15
EPHB3P54753 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.6□□□□□ -2.15
EPHB3P54753 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.6□□□□□ -2.15
EPHB3P54753 ZNF209P-201ENST00000593450 2304 ntBASIC1.6□□□□□ -2.15
EPHB3P54753 AL161722.3-201ENST00000605789 2983 ntBASIC1.59□□□□□ -2.15
EPHB3P54753 Y_RNA.13-201ENST00000362403 112 ntBASIC1.59□□□□□ -2.15
EPHB3P54753 RNU6-590P-201ENST00000365039 107 ntBASIC1.59□□□□□ -2.15
EPHB3P54753 SNORD90-201ENST00000391145 111 ntBASIC1.59□□□□□ -2.15
EPHB3P54753 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.59□□□□□ -2.15
EPHB3P54753 RNU6-1054P-201ENST00000411293 104 ntBASIC1.59□□□□□ -2.15
EPHB3P54753 AC074348.1-201ENST00000426503 132 ntBASIC1.59□□□□□ -2.15
EPHB3P54753 AC015818.7-201ENST00000428754 109 ntBASIC1.59□□□□□ -2.15
EPHB3P54753 RNU6-303P-201ENST00000517091 106 ntBASIC1.59□□□□□ -2.15
EPHB3P54753 TRDV1-202ENST00000621643 102 ntBASIC1.59□□□□□ -2.15
EPHB3P54753 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.58□□□□□ -2.16
EPHB3P54753 AC092628.1-201ENST00000436250 252 ntBASIC1.58□□□□□ -2.16
EPHB3P54753 Y_RNA.809-201ENST00000516058 95 ntBASIC1.58□□□□□ -2.16
EPHB3P54753 Y_RNA.42-201ENST00000362660 108 ntBASIC1.57□□□□□ -2.16
EPHB3P54753 SNORA7.1-201ENST00000363750 139 ntBASIC1.57□□□□□ -2.16
EPHB3P54753 SNORD113.3-201ENST00000364630 78 ntBASIC1.57□□□□□ -2.16
EPHB3P54753 MIR1304-201ENST00000408243 91 ntBASIC1.57□□□□□ -2.16
EPHB3P54753 RNA5SP247-201ENST00000411181 105 ntBASIC1.57□□□□□ -2.16
EPHB3P54753 AL606490.4-201ENST00000423117 127 ntBASIC1.57□□□□□ -2.16
EPHB3P54753 AC097635.1-201ENST00000450678 155 ntBASIC1.57□□□□□ -2.16
EPHB3P54753 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.57□□□□□ -2.16
EPHB3P54753 RNU6-539P-201ENST00000516665 103 ntBASIC1.57□□□□□ -2.16
EPHB3P54753 AL512310.8-201ENST00000550183 120 ntBASIC1.57□□□□□ -2.16
EPHB3P54753 MIR125B2-201ENST00000385128 89 ntBASIC1.56□□□□□ -2.16
EPHB3P54753 SNORD83.1-201ENST00000411362 77 ntBASIC1.56□□□□□ -2.16
EPHB3P54753 AL354695.1-201ENST00000427935 228 ntBASIC1.56□□□□□ -2.16
EPHB3P54753 RNU6-871P-201ENST00000516122 100 ntBASIC1.56□□□□□ -2.16
EPHB3P54753 RNU6-448P-201ENST00000517052 107 ntBASIC1.56□□□□□ -2.16
EPHB3P54753 RNU6-1015P-201ENST00000517121 99 ntBASIC1.56□□□□□ -2.16
EPHB3P54753 AC036111.3-201ENST00000526389 112 ntBASIC1.56□□□□□ -2.16
EPHB3P54753 MIR3937-201ENST00000580135 106 ntBASIC1.56□□□□□ -2.16
EPHB3P54753 MTRNR2L2-201ENST00000604882 87 ntBASIC1.56□□□□□ -2.16
EPHB3P54753 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.55□□□□□ -2.16
EPHB3P54753 RNU6-1051P-201ENST00000365471 102 ntBASIC1.55□□□□□ -2.16
EPHB3P54753 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
EPHB3P54753 RPS27P16-201ENST00000425758 201 ntBASIC1.55□□□□□ -2.16
EPHB3P54753 Y_RNA.681-201ENST00000516445 113 ntBASIC1.55□□□□□ -2.16
EPHB3P54753 MIR4421-201ENST00000578133 69 ntBASIC1.55□□□□□ -2.16
EPHB3P54753 MIR4484-201ENST00000582855 83 ntBASIC1.55□□□□□ -2.16
EPHB3P54753 RNU5F-1-201ENST00000362507 117 ntBASIC1.54□□□□□ -2.16
EPHB3P54753 Y_RNA.239-201ENST00000364444 113 ntBASIC1.54□□□□□ -2.16
EPHB3P54753 RNU6-934P-201ENST00000365154 107 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 245.1 ms