Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 AC027335.2-201ENST00000624030 375 ntBASIC1.12□□□□□ -2.23
MMP13P45452 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
MMP13P45452 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
MMP13P45452 RNU6-228P-201ENST00000362700 106 ntBASIC1.11□□□□□ -2.23
MMP13P45452 RNU6-53P-201ENST00000365367 106 ntBASIC1.11□□□□□ -2.23
MMP13P45452 SNORA25-201ENST00000384384 134 ntBASIC1.11□□□□□ -2.23
MMP13P45452 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
MMP13P45452 SNORD100-201ENST00000408573 76 ntBASIC1.11□□□□□ -2.23
MMP13P45452 RPS26P5-201ENST00000418544 335 ntBASIC1.11□□□□□ -2.23
MMP13P45452 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.11□□□□□ -2.23
MMP13P45452 MIR4676-201ENST00000583078 72 ntBASIC1.11□□□□□ -2.23
MMP13P45452 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.11□□□□□ -2.23
MMP13P45452 MIR4295-201ENST00000585286 85 ntBASIC1.11□□□□□ -2.23
MMP13P45452 MIR548BB-201ENST00000626714 66 ntBASIC1.11□□□□□ -2.23
MMP13P45452 AC006160.2-201ENST00000637708 154 ntBASIC1.11□□□□□ -2.23
MMP13P45452 RNU6-633P-201ENST00000362612 103 ntBASIC1.1□□□□□ -2.23
MMP13P45452 RNU6-1125P-201ENST00000363601 107 ntBASIC1.1□□□□□ -2.23
MMP13P45452 RNA5SP245-201ENST00000364239 121 ntBASIC1.1□□□□□ -2.23
MMP13P45452 RNU6-392P-201ENST00000364926 101 ntBASIC1.1□□□□□ -2.23
MMP13P45452 RNU6-480P-201ENST00000384332 107 ntBASIC1.1□□□□□ -2.23
MMP13P45452 SNORA80D-201ENST00000384488 135 ntBASIC1.1□□□□□ -2.23
MMP13P45452 RNU6-1275P-201ENST00000391087 107 ntBASIC1.1□□□□□ -2.23
MMP13P45452 SNORD111-201ENST00000408139 94 ntBASIC1.1□□□□□ -2.23
MMP13P45452 MIR1257-201ENST00000408490 117 ntBASIC1.1□□□□□ -2.23
MMP13P45452 SNORD4B-201ENST00000459083 72 ntBASIC1.1□□□□□ -2.23
MMP13P45452 TRMT112P2-201ENST00000512910 132 ntBASIC1.1□□□□□ -2.23
MMP13P45452 MIR4781-201ENST00000585250 76 ntBASIC1.1□□□□□ -2.23
MMP13P45452 IGLL4P-201ENST00000614590 133 ntBASIC1.1□□□□□ -2.23
MMP13P45452 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.1□□□□□ -2.23
MMP13P45452 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.09□□□□□ -2.23
MMP13P45452 RNU4-58P-201ENST00000363192 141 ntBASIC1.09□□□□□ -2.23
MMP13P45452 RNU6-509P-201ENST00000363519 107 ntBASIC1.09□□□□□ -2.23
MMP13P45452 RNU6-524P-201ENST00000384270 107 ntBASIC1.09□□□□□ -2.23
MMP13P45452 RNU6-321P-201ENST00000410912 106 ntBASIC1.09□□□□□ -2.23
MMP13P45452 SNORD63B-201ENST00000411005 70 ntBASIC1.09□□□□□ -2.23
MMP13P45452 AL606490.4-201ENST00000423117 127 ntBASIC1.09□□□□□ -2.23
MMP13P45452 AL161932.1-201ENST00000437408 146 ntBASIC1.09□□□□□ -2.23
MMP13P45452 AC002429.1-201ENST00000437672 148 ntBASIC1.09□□□□□ -2.23
MMP13P45452 AC087343.1-201ENST00000477341 475 ntBASIC1.09□□□□□ -2.23
MMP13P45452 RNU6-1053P-201ENST00000515930 101 ntBASIC1.09□□□□□ -2.23
MMP13P45452 RNU6-75P-201ENST00000515944 104 ntBASIC1.09□□□□□ -2.23
MMP13P45452 RNA5SP404-201ENST00000517118 132 ntBASIC1.09□□□□□ -2.23
MMP13P45452 RNU7-156P-201ENST00000517214 74 ntBASIC1.09□□□□□ -2.23
MMP13P45452 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.08□□□□□ -2.24
MMP13P45452 RNU1-124P-201ENST00000363861 145 ntBASIC1.08□□□□□ -2.24
MMP13P45452 RNU7-195P-201ENST00000458793 62 ntBASIC1.08□□□□□ -2.24
MMP13P45452 RNU7-90P-201ENST00000459216 62 ntBASIC1.08□□□□□ -2.24
MMP13P45452 RNU7-153P-201ENST00000516455 62 ntBASIC1.08□□□□□ -2.24
MMP13P45452 MIR4804-201ENST00000581683 73 ntBASIC1.08□□□□□ -2.24
MMP13P45452 RNU6-1276P-201ENST00000365372 104 ntBASIC1.07□□□□□ -2.24
MMP13P45452 Y_RNA.536-201ENST00000384621 113 ntBASIC1.07□□□□□ -2.24
MMP13P45452 Y_RNA.611-201ENST00000410682 108 ntBASIC1.07□□□□□ -2.24
MMP13P45452 RNA5SP225-201ENST00000410874 135 ntBASIC1.07□□□□□ -2.24
MMP13P45452 RNU7-56P-201ENST00000458744 62 ntBASIC1.07□□□□□ -2.24
MMP13P45452 RNU7-102P-201ENST00000458948 62 ntBASIC1.07□□□□□ -2.24
MMP13P45452 RNU6-448P-201ENST00000517052 107 ntBASIC1.07□□□□□ -2.24
MMP13P45452 SNORA70.22-201ENST00000517160 124 ntBASIC1.07□□□□□ -2.24
MMP13P45452 SNORD92-201ENST00000585078 85 ntBASIC1.07□□□□□ -2.24
MMP13P45452 SNORD114-21-201ENST00000606412 72 ntBASIC1.07□□□□□ -2.24
MMP13P45452 RNU6-957P-201ENST00000363652 99 ntBASIC1.06□□□□□ -2.24
MMP13P45452 Y_RNA.313-201ENST00000365095 103 ntBASIC1.06□□□□□ -2.24
MMP13P45452 RNU6-291P-201ENST00000384720 107 ntBASIC1.06□□□□□ -2.24
MMP13P45452 SNORD78.1-201ENST00000390866 65 ntBASIC1.06□□□□□ -2.24
MMP13P45452 AC092628.1-201ENST00000436250 252 ntBASIC1.06□□□□□ -2.24
MMP13P45452 Y_RNA.648-201ENST00000459455 110 ntBASIC1.06□□□□□ -2.24
MMP13P45452 RNU7-171P-201ENST00000459581 62 ntBASIC1.06□□□□□ -2.24
MMP13P45452 RNA5SP395-201ENST00000516567 118 ntBASIC1.06□□□□□ -2.24
MMP13P45452 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.06□□□□□ -2.24
MMP13P45452 Y_RNA.219-201ENST00000364232 113 ntBASIC1.05□□□□□ -2.24
MMP13P45452 RNU6-132P-201ENST00000383863 107 ntBASIC1.05□□□□□ -2.24
MMP13P45452 RNU6-1124P-201ENST00000384169 107 ntBASIC1.05□□□□□ -2.24
MMP13P45452 MIR222-201ENST00000384992 110 ntBASIC1.05□□□□□ -2.24
MMP13P45452 RNU6-1254P-201ENST00000391266 104 ntBASIC1.05□□□□□ -2.24
MMP13P45452 RNU6-519P-201ENST00000410590 108 ntBASIC1.05□□□□□ -2.24
MMP13P45452 RNU6-1194P-201ENST00000516208 104 ntBASIC1.05□□□□□ -2.24
MMP13P45452 RNU6-765P-201ENST00000516916 99 ntBASIC1.05□□□□□ -2.24
MMP13P45452 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.05□□□□□ -2.24
MMP13P45452 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
MMP13P45452 Y_RNA.283-201ENST00000364798 112 ntBASIC1.04□□□□□ -2.24
MMP13P45452 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
MMP13P45452 RNA5SP292-201ENST00000390974 118 ntBASIC1.04□□□□□ -2.24
MMP13P45452 SNORD12-201ENST00000391002 90 ntBASIC1.04□□□□□ -2.24
MMP13P45452 MIR1255A-201ENST00000408338 113 ntBASIC1.04□□□□□ -2.24
MMP13P45452 OR2A41P-201ENST00000473586 105 ntBASIC1.04□□□□□ -2.24
MMP13P45452 Y_RNA.697-201ENST00000516776 113 ntBASIC1.04□□□□□ -2.24
MMP13P45452 AP003327.1-201ENST00000529684 127 ntBASIC1.04□□□□□ -2.24
MMP13P45452 RNU4-32P-201ENST00000363404 141 ntBASIC1.03□□□□□ -2.24
MMP13P45452 MIR19B1-201ENST00000384829 87 ntBASIC1.03□□□□□ -2.24
MMP13P45452 SNORD90-201ENST00000391145 111 ntBASIC1.03□□□□□ -2.24
MMP13P45452 MIR938-201ENST00000401216 83 ntBASIC1.03□□□□□ -2.24
MMP13P45452 MIR1827-201ENST00000408549 66 ntBASIC1.03□□□□□ -2.24
MMP13P45452 MIR4666B-201ENST00000578142 81 ntBASIC1.03□□□□□ -2.24
MMP13P45452 RMST_2.1-201ENST00000617263 136 ntBASIC1.03□□□□□ -2.24
MMP13P45452 MIR101-2-201ENST00000362195 79 ntBASIC1.02□□□□□ -2.25
MMP13P45452 Y_RNA.56-201ENST00000362798 112 ntBASIC1.02□□□□□ -2.25
MMP13P45452 RNU4-38P-201ENST00000364472 129 ntBASIC1.02□□□□□ -2.25
MMP13P45452 RNU6-1335P-201ENST00000365426 107 ntBASIC1.02□□□□□ -2.25
MMP13P45452 MIR635-201ENST00000384830 98 ntBASIC1.02□□□□□ -2.25
MMP13P45452 MIR519A1-201ENST00000385257 85 ntBASIC1.02□□□□□ -2.25
MMP13P45452 RNU6-994P-201ENST00000410507 111 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 167.8 ms