Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 uc_338.17-201ENST00000619633 179 ntBASIC0.64□□□□□ -2.31
RFC1P35251 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
RFC1P35251 MIR140-201ENST00000385282 100 ntBASIC0.63□□□□□ -2.31
RFC1P35251 MIR548G-201ENST00000408442 89 ntBASIC0.63□□□□□ -2.31
RFC1P35251 Y_RNA.629-201ENST00000411368 105 ntBASIC0.63□□□□□ -2.31
RFC1P35251 AC244505.6-201ENST00000452829 130 ntBASIC0.63□□□□□ -2.31
RFC1P35251 RNA5SP121-201ENST00000516537 101 ntBASIC0.63□□□□□ -2.31
RFC1P35251 RNA5SP94-201ENST00000516917 108 ntBASIC0.63□□□□□ -2.31
RFC1P35251 RNU6-1223P-201ENST00000517124 104 ntBASIC0.63□□□□□ -2.31
RFC1P35251 MIR4714-201ENST00000580728 77 ntBASIC0.63□□□□□ -2.31
RFC1P35251 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.62□□□□□ -2.31
RFC1P35251 RNY3P2-201ENST00000362918 102 ntBASIC0.62□□□□□ -2.31
RFC1P35251 SNORA36.1-201ENST00000363424 132 ntBASIC0.62□□□□□ -2.31
RFC1P35251 Y_RNA.173-201ENST00000363776 113 ntBASIC0.62□□□□□ -2.31
RFC1P35251 RNU6-42P-201ENST00000384165 107 ntBASIC0.62□□□□□ -2.31
RFC1P35251 SNORD38.2-201ENST00000384470 69 ntBASIC0.62□□□□□ -2.31
RFC1P35251 MIR635-201ENST00000384830 98 ntBASIC0.62□□□□□ -2.31
RFC1P35251 RNU7-106P-201ENST00000459514 67 ntBASIC0.62□□□□□ -2.31
RFC1P35251 RNU4-54P-201ENST00000516428 129 ntBASIC0.62□□□□□ -2.31
RFC1P35251 Y_RNA.709-201ENST00000516952 92 ntBASIC0.62□□□□□ -2.31
RFC1P35251 MTND5P40-201ENST00000559945 246 ntBASIC0.62□□□□□ -2.31
RFC1P35251 RNU6-90P-201ENST00000606352 106 ntBASIC0.62□□□□□ -2.31
RFC1P35251 RNU6-170P-201ENST00000362832 104 ntBASIC0.61□□□□□ -2.31
RFC1P35251 RNU6-1163P-201ENST00000364516 107 ntBASIC0.61□□□□□ -2.31
RFC1P35251 RNU6-1325P-201ENST00000364905 105 ntBASIC0.61□□□□□ -2.31
RFC1P35251 SNORD28-201ENST00000384706 75 ntBASIC0.61□□□□□ -2.31
RFC1P35251 SNORD63B-201ENST00000411005 70 ntBASIC0.61□□□□□ -2.31
RFC1P35251 SPINT5P-201ENST00000448174 155 ntBASIC0.61□□□□□ -2.31
RFC1P35251 AC138869.1-201ENST00000568623 124 ntBASIC0.61□□□□□ -2.31
RFC1P35251 MIR6734-201ENST00000621166 68 ntBASIC0.61□□□□□ -2.31
RFC1P35251 Y_RNA.342-201ENST00000365352 113 ntBASIC0.6□□□□□ -2.31
RFC1P35251 RNU6-106P-201ENST00000384405 107 ntBASIC0.6□□□□□ -2.31
RFC1P35251 MIR519A1-201ENST00000385257 85 ntBASIC0.6□□□□□ -2.31
RFC1P35251 SNORA19.1-201ENST00000410656 129 ntBASIC0.6□□□□□ -2.31
RFC1P35251 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.6□□□□□ -2.31
RFC1P35251 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.6□□□□□ -2.31
RFC1P35251 RNU6-469P-201ENST00000516253 101 ntBASIC0.6□□□□□ -2.31
RFC1P35251 RNA5SP47-201ENST00000517230 109 ntBASIC0.6□□□□□ -2.31
RFC1P35251 AC018659.1-201ENST00000551083 169 ntBASIC0.6□□□□□ -2.31
RFC1P35251 RNU7-10P-201ENST00000607194 63 ntBASIC0.6□□□□□ -2.31
RFC1P35251 AC091304.10-201ENST00000641554 121 ntBASIC0.6□□□□□ -2.31
RFC1P35251 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
RFC1P35251 RNA5SP517-201ENST00000364724 117 ntBASIC0.59□□□□□ -2.31
RFC1P35251 MIR516A2-201ENST00000384888 90 ntBASIC0.59□□□□□ -2.31
RFC1P35251 MIR516A1-201ENST00000385033 90 ntBASIC0.59□□□□□ -2.31
RFC1P35251 MIR92A1-201ENST00000385233 78 ntBASIC0.59□□□□□ -2.31
RFC1P35251 RNY4P18-201ENST00000391107 89 ntBASIC0.59□□□□□ -2.31
RFC1P35251 RNU6-554P-201ENST00000410466 106 ntBASIC0.59□□□□□ -2.31
RFC1P35251 RNU7-195P-201ENST00000458793 62 ntBASIC0.59□□□□□ -2.31
RFC1P35251 snoU13.18-201ENST00000459483 104 ntBASIC0.59□□□□□ -2.31
RFC1P35251 AC141557.1-201ENST00000540982 400 ntBASIC0.59□□□□□ -2.31
RFC1P35251 MIR5000-201ENST00000577717 103 ntBASIC0.59□□□□□ -2.31
RFC1P35251 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.32
RFC1P35251 Y_RNA.163-201ENST00000363702 113 ntBASIC0.58□□□□□ -2.32
RFC1P35251 RNA5SP499-201ENST00000363982 119 ntBASIC0.58□□□□□ -2.32
RFC1P35251 SNORD20-201ENST00000384550 80 ntBASIC0.58□□□□□ -2.32
RFC1P35251 Y_RNA.567-201ENST00000384736 106 ntBASIC0.58□□□□□ -2.32
RFC1P35251 RNU6-135P-201ENST00000516769 101 ntBASIC0.58□□□□□ -2.32
RFC1P35251 RNU7-161P-201ENST00000517289 62 ntBASIC0.58□□□□□ -2.32
RFC1P35251 MIR548AI-201ENST00000579940 88 ntBASIC0.58□□□□□ -2.32
RFC1P35251 MIR4639-201ENST00000584938 69 ntBASIC0.58□□□□□ -2.32
RFC1P35251 AC244669.1-204ENST00000621564 178 ntBASIC0.58□□□□□ -2.32
RFC1P35251 MIR6828-201ENST00000636181 60 ntBASIC0.58□□□□□ -2.32
RFC1P35251 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC0.58□□□□□ -2.32
RFC1P35251 RNU6-215P-201ENST00000365169 102 ntBASIC0.57□□□□□ -2.32
RFC1P35251 RNU6-945P-201ENST00000383947 107 ntBASIC0.57□□□□□ -2.32
RFC1P35251 MIR599-201ENST00000385069 95 ntBASIC0.57□□□□□ -2.32
RFC1P35251 AC109327.2-201ENST00000448339 378 ntBASIC0.57□□□□□ -2.32
RFC1P35251 AC097635.1-201ENST00000450678 155 ntBASIC0.57□□□□□ -2.32
RFC1P35251 RNU6-904P-201ENST00000516206 101 ntBASIC0.57□□□□□ -2.32
RFC1P35251 RNU6-537P-201ENST00000517277 103 ntBASIC0.57□□□□□ -2.32
RFC1P35251 uc_338.28-201ENST00000612082 187 ntBASIC0.57□□□□□ -2.32
RFC1P35251 SNORD115-24-201ENST00000363528 82 ntBASIC0.56□□□□□ -2.32
RFC1P35251 Y_RNA.508-201ENST00000384502 114 ntBASIC0.56□□□□□ -2.32
RFC1P35251 SCARNA16.5-201ENST00000517114 183 ntBASIC0.56□□□□□ -2.32
RFC1P35251 AC096720.1-201ENST00000604441 183 ntBASIC0.56□□□□□ -2.32
RFC1P35251 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.56□□□□□ -2.32
RFC1P35251 AC092634.7-201ENST00000621022 103 ntBASIC0.56□□□□□ -2.32
RFC1P35251 SNORD36A-201ENST00000362874 73 ntBASIC0.55□□□□□ -2.32
RFC1P35251 RNU6-1260P-201ENST00000362944 107 ntBASIC0.55□□□□□ -2.32
RFC1P35251 Y_RNA.78-201ENST00000362970 110 ntBASIC0.55□□□□□ -2.32
RFC1P35251 RNA5SP403-201ENST00000363598 108 ntBASIC0.55□□□□□ -2.32
RFC1P35251 SNORA8.2-201ENST00000384372 139 ntBASIC0.55□□□□□ -2.32
RFC1P35251 Y_RNA.659-201ENST00000515994 113 ntBASIC0.55□□□□□ -2.32
RFC1P35251 Y_RNA.809-201ENST00000516058 95 ntBASIC0.55□□□□□ -2.32
RFC1P35251 MIR548Z-201ENST00000584743 97 ntBASIC0.55□□□□□ -2.32
RFC1P35251 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.55□□□□□ -2.32
RFC1P35251 RNU6-1244P-201ENST00000363614 108 ntBASIC0.54□□□□□ -2.32
RFC1P35251 Y_RNA.221-201ENST00000364248 96 ntBASIC0.54□□□□□ -2.32
RFC1P35251 Y_RNA.601-201ENST00000410500 113 ntBASIC0.54□□□□□ -2.32
RFC1P35251 AL157398.1-201ENST00000452981 186 ntBASIC0.54□□□□□ -2.32
RFC1P35251 RNU6-86P-201ENST00000606534 107 ntBASIC0.54□□□□□ -2.32
RFC1P35251 AC012531.4-201ENST00000616509 177 ntBASIC0.54□□□□□ -2.32
RFC1P35251 Y_RNA.57-201ENST00000362806 113 ntBASIC0.53□□□□□ -2.32
RFC1P35251 RNU6-1229P-201ENST00000364295 107 ntBASIC0.53□□□□□ -2.32
RFC1P35251 MIR590-201ENST00000385008 97 ntBASIC0.53□□□□□ -2.32
RFC1P35251 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.53□□□□□ -2.32
RFC1P35251 RNA5SP268-201ENST00000516828 124 ntBASIC0.53□□□□□ -2.32
RFC1P35251 MIR4777-201ENST00000583710 86 ntBASIC0.53□□□□□ -2.32
RFC1P35251 SNORA25.18-201ENST00000607153 114 ntBASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 205.5 ms