Protein–RNA interactions for Protein: P25940

COL5A3, Collagen alpha-3(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3P25940 RNY4P20-201ENST00000516678 93 ntBASIC0.06□□□□□ -2.4
COL5A3P25940 RNU7-161P-201ENST00000517289 62 ntBASIC0.06□□□□□ -2.4
COL5A3P25940 MTND5P40-201ENST00000559945 246 ntBASIC0.06□□□□□ -2.4
COL5A3P25940 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.06□□□□□ -2.4
COL5A3P25940 AC087741.2-201ENST00000619415 172 ntBASIC0.06□□□□□ -2.4
COL5A3P25940 Y_RNA.778-201ENST00000620203 90 ntBASIC0.06□□□□□ -2.4
COL5A3P25940 MIR371B-201ENST00000638082 66 ntBASIC0.06□□□□□ -2.4
COL5A3P25940 RNU6-509P-201ENST00000363519 107 ntBASIC0.05□□□□□ -2.4
COL5A3P25940 RNY1P11-201ENST00000363759 113 ntBASIC0.05□□□□□ -2.4
COL5A3P25940 RNU6-291P-201ENST00000384720 107 ntBASIC0.05□□□□□ -2.4
COL5A3P25940 Y_RNA.580-201ENST00000391004 95 ntBASIC0.05□□□□□ -2.4
COL5A3P25940 snosnR66.1-201ENST00000391095 99 ntBASIC0.05□□□□□ -2.4
COL5A3P25940 RNU6-460P-201ENST00000391158 108 ntBASIC0.05□□□□□ -2.4
COL5A3P25940 MIR548L-201ENST00000408303 86 ntBASIC0.05□□□□□ -2.4
COL5A3P25940 RNU6-735P-201ENST00000410612 107 ntBASIC0.05□□□□□ -2.4
COL5A3P25940 RPL39P34-201ENST00000477141 156 ntBASIC0.05□□□□□ -2.4
COL5A3P25940 RNU7-137P-201ENST00000516788 62 ntBASIC0.05□□□□□ -2.4
COL5A3P25940 RNU6-182P-201ENST00000516970 105 ntBASIC0.05□□□□□ -2.4
COL5A3P25940 MIR3144-201ENST00000579460 79 ntBASIC0.05□□□□□ -2.4
COL5A3P25940 Y_RNA.98-201ENST00000363109 102 ntBASIC0.04□□□□□ -2.4
COL5A3P25940 RNA5SP205-201ENST00000364653 136 ntBASIC0.04□□□□□ -2.4
COL5A3P25940 RNU4-11P-201ENST00000365287 132 ntBASIC0.04□□□□□ -2.4
COL5A3P25940 Y_RNA.360-201ENST00000365512 102 ntBASIC0.04□□□□□ -2.4
COL5A3P25940 Y_RNA.398-201ENST00000383952 99 ntBASIC0.04□□□□□ -2.4
COL5A3P25940 AC244505.6-201ENST00000452829 130 ntBASIC0.04□□□□□ -2.4
COL5A3P25940 RNU6-1018P-201ENST00000516577 106 ntBASIC0.04□□□□□ -2.4
COL5A3P25940 AC104408.1-201ENST00000605241 170 ntBASIC0.04□□□□□ -2.4
COL5A3P25940 RNU7-10P-201ENST00000607194 63 ntBASIC0.04□□□□□ -2.4
COL5A3P25940 MIR499B-201ENST00000636498 73 ntBASIC0.04□□□□□ -2.4
COL5A3P25940 RNU6-652P-201ENST00000365488 107 ntBASIC0.04□□□□□ -2.4
COL5A3P25940 Y_RNA.528-201ENST00000384575 108 ntBASIC0.04□□□□□ -2.4
COL5A3P25940 RNU7-106P-201ENST00000459514 67 ntBASIC0.04□□□□□ -2.4
COL5A3P25940 RNA5SP272-201ENST00000516095 111 ntBASIC0.04□□□□□ -2.4
COL5A3P25940 RNU6-1265P-201ENST00000516342 103 ntBASIC0.04□□□□□ -2.4
COL5A3P25940 RNU6-521P-201ENST00000516663 105 ntBASIC0.04□□□□□ -2.4
COL5A3P25940 SCARNA16.5-201ENST00000517114 183 ntBASIC0.04□□□□□ -2.4
COL5A3P25940 SNORA81.3-201ENST00000517283 198 ntBASIC0.04□□□□□ -2.4
COL5A3P25940 MIR7107-201ENST00000611489 80 ntBASIC0.04□□□□□ -2.4
COL5A3P25940 MIR376B-201ENST00000614515 100 ntBASIC0.04□□□□□ -2.4
COL5A3P25940 TUG1_4.1-201ENST00000619464 181 ntBASIC0.04□□□□□ -2.4
COL5A3P25940 AP001340.1-201ENST00000624405 217 ntBASIC0.04□□□□□ -2.4
COL5A3P25940 AL512310.12-203ENST00000640543 90 ntBASIC0.04□□□□□ -2.4
COL5A3P25940 SNORD115-24-201ENST00000363528 82 ntBASIC0.03□□□□□ -2.4
COL5A3P25940 Y_RNA.150-201ENST00000363562 102 ntBASIC0.03□□□□□ -2.4
COL5A3P25940 Y_RNA.221-201ENST00000364248 96 ntBASIC0.03□□□□□ -2.4
COL5A3P25940 Y_RNA.362-201ENST00000365518 110 ntBASIC0.03□□□□□ -2.4
COL5A3P25940 Y_RNA.448-201ENST00000384185 108 ntBASIC0.03□□□□□ -2.4
COL5A3P25940 RNU6-616P-201ENST00000384353 107 ntBASIC0.03□□□□□ -2.4
COL5A3P25940 MIR593-201ENST00000384856 100 ntBASIC0.03□□□□□ -2.4
COL5A3P25940 MIR516A2-201ENST00000384888 90 ntBASIC0.03□□□□□ -2.4
COL5A3P25940 MIR516A1-201ENST00000385033 90 ntBASIC0.03□□□□□ -2.4
COL5A3P25940 MIR760-201ENST00000390220 80 ntBASIC0.03□□□□□ -2.4
COL5A3P25940 RNU7-197P-201ENST00000458836 62 ntBASIC0.03□□□□□ -2.4
COL5A3P25940 RNU7-6P-201ENST00000516845 62 ntBASIC0.03□□□□□ -2.4
COL5A3P25940 uc_338.10-201ENST00000621872 182 ntBASIC0.03□□□□□ -2.4
COL5A3P25940 Y_RNA.114-201ENST00000363265 113 ntBASIC0.02□□□□□ -2.41
COL5A3P25940 RNU6-647P-201ENST00000364243 107 ntBASIC0.02□□□□□ -2.41
COL5A3P25940 RNU6-1229P-201ENST00000364295 107 ntBASIC0.02□□□□□ -2.41
COL5A3P25940 RNU6-1130P-201ENST00000365434 107 ntBASIC0.02□□□□□ -2.41
COL5A3P25940 RNU6-187P-201ENST00000384139 106 ntBASIC0.02□□□□□ -2.41
COL5A3P25940 MIR610-201ENST00000385139 96 ntBASIC0.02□□□□□ -2.41
COL5A3P25940 SNORD77B-201ENST00000391112 67 ntBASIC0.02□□□□□ -2.41
COL5A3P25940 MIR1263-201ENST00000408324 86 ntBASIC0.02□□□□□ -2.41
COL5A3P25940 MIR548I2-201ENST00000408348 149 ntBASIC0.02□□□□□ -2.41
COL5A3P25940 RNA5SP136-201ENST00000410906 107 ntBASIC0.02□□□□□ -2.41
COL5A3P25940 SUMO1P3-201ENST00000439961 304 ntBASIC0.02□□□□□ -2.41
COL5A3P25940 RNA5SP227-201ENST00000516184 113 ntBASIC0.02□□□□□ -2.41
COL5A3P25940 RNU6-1232P-201ENST00000516299 86 ntBASIC0.02□□□□□ -2.41
COL5A3P25940 RNU6-794P-201ENST00000517261 64 ntBASIC0.02□□□□□ -2.41
COL5A3P25940 MIR5706-201ENST00000579841 80 ntBASIC0.02□□□□□ -2.41
COL5A3P25940 SNORD114-28-201ENST00000363610 72 ntBASIC0.01□□□□□ -2.41
COL5A3P25940 Y_RNA.198-201ENST00000364013 98 ntBASIC0.01□□□□□ -2.41
COL5A3P25940 SNORD41.1-201ENST00000391000 69 ntBASIC0.01□□□□□ -2.41
COL5A3P25940 RNU6-269P-201ENST00000391077 97 ntBASIC0.01□□□□□ -2.41
COL5A3P25940 AC108059.2-201ENST00000434626 151 ntBASIC0.01□□□□□ -2.41
COL5A3P25940 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.01□□□□□ -2.41
COL5A3P25940 RNU6-90P-201ENST00000606352 106 ntBASIC0.01□□□□□ -2.41
COL5A3P25940 AP001362.1-201ENST00000625165 124 ntBASIC0.01□□□□□ -2.41
COL5A3P25940 SNORD36A-201ENST00000362874 73 ntBASIC0.01□□□□□ -2.41
COL5A3P25940 Y_RNA.127-201ENST00000363386 109 ntBASIC0.01□□□□□ -2.41
COL5A3P25940 Y_RNA.215-201ENST00000364204 112 ntBASIC0.01□□□□□ -2.41
COL5A3P25940 RNU6-915P-201ENST00000364943 103 ntBASIC0.01□□□□□ -2.41
COL5A3P25940 Y_RNA.323-201ENST00000365157 109 ntBASIC0.01□□□□□ -2.41
COL5A3P25940 RNA5SP128-201ENST00000365305 116 ntBASIC0.01□□□□□ -2.41
COL5A3P25940 Y_RNA.342-201ENST00000365352 113 ntBASIC0.01□□□□□ -2.41
COL5A3P25940 MIR224-201ENST00000384889 81 ntBASIC0.01□□□□□ -2.41
COL5A3P25940 SNORD63B-201ENST00000411005 70 ntBASIC0.01□□□□□ -2.41
COL5A3P25940 RNU7-195P-201ENST00000458793 62 ntBASIC0.01□□□□□ -2.41
COL5A3P25940 Y_RNA.659-201ENST00000515994 113 ntBASIC0.01□□□□□ -2.41
COL5A3P25940 RNU6-782P-201ENST00000516852 104 ntBASIC0.01□□□□□ -2.41
COL5A3P25940 AC098479.1-201ENST00000609225 154 ntBASIC0.01□□□□□ -2.41
COL5A3P25940 MIR1255B1-201ENST00000636325 63 ntBASIC0.01□□□□□ -2.41
COL5A3P25940 AC073869.9-201ENST00000641610 120 ntBASIC0.01□□□□□ -2.41
COL5A3P25940 RNY4P6-201ENST00000363667 96 ntBASIC0□□□□□ -2.41
COL5A3P25940 RNU6-865P-201ENST00000364772 107 ntBASIC0□□□□□ -2.41
COL5A3P25940 Y_RNA.507-201ENST00000384500 99 ntBASIC0□□□□□ -2.41
COL5A3P25940 MIR145-201ENST00000384967 88 ntBASIC0□□□□□ -2.41
COL5A3P25940 MIR599-201ENST00000385069 95 ntBASIC0□□□□□ -2.41
COL5A3P25940 MIR892B-201ENST00000401279 77 ntBASIC0□□□□□ -2.41
COL5A3P25940 RNA5SP451-201ENST00000410588 110 ntBASIC0□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 218.6 ms