Protein–RNA interactions for Protein: P11940

PABPC1, Polyadenylate-binding protein 1, humanhuman

Known RBP Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P11940 RNU6-887P-201ENST00000410660 100 ntBASIC1.2□□□□□ -2.22
PABPC1P11940 RNA5SP102-201ENST00000516865 106 ntBASIC1.2□□□□□ -2.22
PABPC1P11940 RNU6-291P-201ENST00000384720 107 ntBASIC1.19□□□□□ -2.22
PABPC1P11940 MIR1287-201ENST00000408492 90 ntBASIC1.19□□□□□ -2.22
PABPC1P11940 AC103810.7-201ENST00000607821 91 ntBASIC1.19□□□□□ -2.22
PABPC1P11940 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
PABPC1P11940 RNU6-1335P-201ENST00000365426 107 ntBASIC1.18□□□□□ -2.22
PABPC1P11940 MIR181B2-201ENST00000385004 89 ntBASIC1.18□□□□□ -2.22
PABPC1P11940 SNORD63B-201ENST00000411005 70 ntBASIC1.18□□□□□ -2.22
PABPC1P11940 AC092628.1-201ENST00000436250 252 ntBASIC1.18□□□□□ -2.22
PABPC1P11940 AC138907.6-201ENST00000568401 126 ntBASIC1.18□□□□□ -2.22
PABPC1P11940 AC138869.1-201ENST00000568623 124 ntBASIC1.18□□□□□ -2.22
PABPC1P11940 Y_RNA.174-201ENST00000363781 105 ntBASIC1.16□□□□□ -2.22
PABPC1P11940 TRAJ51-201ENST00000504127 63 ntBASIC1.16□□□□□ -2.22
PABPC1P11940 MIR4661-201ENST00000582720 75 ntBASIC1.16□□□□□ -2.22
PABPC1P11940 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.16□□□□□ -2.22
PABPC1P11940 MIR6504-201ENST00000613520 61 ntBASIC1.16□□□□□ -2.22
PABPC1P11940 U7.3-201ENST00000616123 62 ntBASIC1.16□□□□□ -2.22
PABPC1P11940 MALAT1.1-201ENST00000618249 95 ntBASIC1.16□□□□□ -2.22
PABPC1P11940 RNA5SP117-201ENST00000365294 118 ntBASIC1.15□□□□□ -2.23
PABPC1P11940 MIR516A2-201ENST00000384888 90 ntBASIC1.15□□□□□ -2.23
PABPC1P11940 MIR516A1-201ENST00000385033 90 ntBASIC1.15□□□□□ -2.23
PABPC1P11940 MIR519A1-201ENST00000385257 85 ntBASIC1.15□□□□□ -2.23
PABPC1P11940 RNU6-1254P-201ENST00000391266 104 ntBASIC1.15□□□□□ -2.23
PABPC1P11940 RNY4P30-201ENST00000410216 95 ntBASIC1.15□□□□□ -2.23
PABPC1P11940 AC002350.1-201ENST00000490759 375 ntBASIC1.15□□□□□ -2.23
PABPC1P11940 MIR4295-201ENST00000585286 85 ntBASIC1.15□□□□□ -2.23
PABPC1P11940 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.14□□□□□ -2.23
PABPC1P11940 Y_RNA.220-201ENST00000364244 109 ntBASIC1.14□□□□□ -2.23
PABPC1P11940 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
PABPC1P11940 SNORD58A-201ENST00000383875 65 ntBASIC1.14□□□□□ -2.23
PABPC1P11940 MIR573-201ENST00000384964 99 ntBASIC1.14□□□□□ -2.23
PABPC1P11940 SNORD99-201ENST00000408612 74 ntBASIC1.14□□□□□ -2.23
PABPC1P11940 RNU7-106P-201ENST00000459514 67 ntBASIC1.14□□□□□ -2.23
PABPC1P11940 AC087343.1-201ENST00000477341 475 ntBASIC1.14□□□□□ -2.23
PABPC1P11940 RNU6-162P-201ENST00000516228 103 ntBASIC1.14□□□□□ -2.23
PABPC1P11940 RNA5SP170-201ENST00000517150 101 ntBASIC1.14□□□□□ -2.23
PABPC1P11940 AC025521.1-201ENST00000621624 286 ntBASIC1.14□□□□□ -2.23
PABPC1P11940 SNORD116-10-201ENST00000363791 102 ntBASIC1.13□□□□□ -2.23
PABPC1P11940 RNU6-243P-201ENST00000391140 107 ntBASIC1.13□□□□□ -2.23
PABPC1P11940 MIR1285-1-201ENST00000408593 84 ntBASIC1.13□□□□□ -2.23
PABPC1P11940 AL513043.2-201ENST00000573941 143 ntBASIC1.13□□□□□ -2.23
PABPC1P11940 uc_338.16-201ENST00000621804 95 ntBASIC1.13□□□□□ -2.23
PABPC1P11940 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.13□□□□□ -2.23
PABPC1P11940 Y_RNA.290-201ENST00000364879 114 ntBASIC1.12□□□□□ -2.23
PABPC1P11940 MIR488-201ENST00000365739 83 ntBASIC1.12□□□□□ -2.23
PABPC1P11940 RNU7-195P-201ENST00000458793 62 ntBASIC1.12□□□□□ -2.23
PABPC1P11940 Y_RNA.809-201ENST00000516058 95 ntBASIC1.12□□□□□ -2.23
PABPC1P11940 SNORA31.14-201ENST00000516728 116 ntBASIC1.12□□□□□ -2.23
PABPC1P11940 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.12□□□□□ -2.23
PABPC1P11940 MIR96-201ENST00000362288 78 ntBASIC1.11□□□□□ -2.23
PABPC1P11940 Y_RNA.32-201ENST00000362589 110 ntBASIC1.11□□□□□ -2.23
PABPC1P11940 SNORD114-27-201ENST00000363766 70 ntBASIC1.11□□□□□ -2.23
PABPC1P11940 RNA5SP245-201ENST00000364239 121 ntBASIC1.11□□□□□ -2.23
PABPC1P11940 AC097635.1-201ENST00000450678 155 ntBASIC1.11□□□□□ -2.23
PABPC1P11940 OR2A41P-201ENST00000473586 105 ntBASIC1.11□□□□□ -2.23
PABPC1P11940 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.11□□□□□ -2.23
PABPC1P11940 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.1□□□□□ -2.23
PABPC1P11940 RNU6-1298P-201ENST00000362456 101 ntBASIC1.1□□□□□ -2.23
PABPC1P11940 SNORD36A-201ENST00000362874 73 ntBASIC1.1□□□□□ -2.23
PABPC1P11940 Y_RNA.191-201ENST00000363972 113 ntBASIC1.1□□□□□ -2.23
PABPC1P11940 AC011195.1-201ENST00000578177 177 ntBASIC1.1□□□□□ -2.23
PABPC1P11940 MIR3612-201ENST00000579753 87 ntBASIC1.1□□□□□ -2.23
PABPC1P11940 RNU6-1260P-201ENST00000362944 107 ntBASIC1.09□□□□□ -2.23
PABPC1P11940 RNU6-1131P-201ENST00000364955 107 ntBASIC1.09□□□□□ -2.23
PABPC1P11940 MIR599-201ENST00000385069 95 ntBASIC1.09□□□□□ -2.23
PABPC1P11940 AC244505.6-201ENST00000452829 130 ntBASIC1.09□□□□□ -2.23
PABPC1P11940 RNU6-469P-201ENST00000516253 101 ntBASIC1.09□□□□□ -2.23
PABPC1P11940 RNU6-135P-201ENST00000516769 101 ntBASIC1.09□□□□□ -2.23
PABPC1P11940 AL353765.1-201ENST00000605514 183 ntBASIC1.09□□□□□ -2.23
PABPC1P11940 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
PABPC1P11940 Y_RNA.224-201ENST00000364308 111 ntBASIC1.08□□□□□ -2.24
PABPC1P11940 SNORD114-22-201ENST00000365423 72 ntBASIC1.08□□□□□ -2.24
PABPC1P11940 MIR4452-201ENST00000583004 71 ntBASIC1.08□□□□□ -2.24
PABPC1P11940 AC244098.3-201ENST00000424803 96 ntBASIC1.07□□□□□ -2.24
PABPC1P11940 Y_RNA.648-201ENST00000459455 110 ntBASIC1.07□□□□□ -2.24
PABPC1P11940 MIR5582-201ENST00000579697 68 ntBASIC1.07□□□□□ -2.24
PABPC1P11940 SNORD114-21-201ENST00000606412 72 ntBASIC1.07□□□□□ -2.24
PABPC1P11940 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.07□□□□□ -2.24
PABPC1P11940 Y_RNA.190-201ENST00000363964 101 ntBASIC1.06□□□□□ -2.24
PABPC1P11940 RNU1-93P-201ENST00000364704 169 ntBASIC1.06□□□□□ -2.24
PABPC1P11940 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.06□□□□□ -2.24
PABPC1P11940 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.06□□□□□ -2.24
PABPC1P11940 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.06□□□□□ -2.24
PABPC1P11940 RNU4-45P-201ENST00000365469 141 ntBASIC1.05□□□□□ -2.24
PABPC1P11940 Y_RNA.369-201ENST00000365568 117 ntBASIC1.05□□□□□ -2.24
PABPC1P11940 RNY1P7-201ENST00000384743 110 ntBASIC1.05□□□□□ -2.24
PABPC1P11940 MIR644A-201ENST00000385262 94 ntBASIC1.05□□□□□ -2.24
PABPC1P11940 RNU6-466P-201ENST00000391224 103 ntBASIC1.05□□□□□ -2.24
PABPC1P11940 MIR6767-201ENST00000637302 66 ntBASIC1.05□□□□□ -2.24
PABPC1P11940 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.05□□□□□ -2.24
PABPC1P11940 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.05□□□□□ -2.24
PABPC1P11940 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
PABPC1P11940 RNU6-49P-201ENST00000384256 107 ntBASIC1.04□□□□□ -2.24
PABPC1P11940 AC103810.9-201ENST00000606688 112 ntBASIC1.04□□□□□ -2.24
PABPC1P11940 Y_RNA.43-201ENST00000362670 111 ntBASIC1.03□□□□□ -2.24
PABPC1P11940 RNU4-38P-201ENST00000364472 129 ntBASIC1.03□□□□□ -2.24
PABPC1P11940 RNU6-524P-201ENST00000384270 107 ntBASIC1.03□□□□□ -2.24
PABPC1P11940 MIR608-201ENST00000384820 100 ntBASIC1.03□□□□□ -2.24
PABPC1P11940 RNU6-519P-201ENST00000410590 108 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 176.2 ms