Protein–RNA interactions for Protein: P09619

PDGFRB, Platelet-derived growth factor receptor beta, humanhuman

Predictions only

Length 1,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRBP09619 MIR924-201ENST00000638017 53 ntBASIC0.45□□□□□ -2.34
PDGFRBP09619 RNU6-704P-201ENST00000364162 103 ntBASIC0.44□□□□□ -2.34
PDGFRBP09619 MIR599-201ENST00000385069 95 ntBASIC0.44□□□□□ -2.34
PDGFRBP09619 MIR1912-201ENST00000410389 80 ntBASIC0.44□□□□□ -2.34
PDGFRBP09619 TRAJ51-201ENST00000504127 63 ntBASIC0.44□□□□□ -2.34
PDGFRBP09619 RNU6-1018P-201ENST00000516577 106 ntBASIC0.44□□□□□ -2.34
PDGFRBP09619 SNRPGP12-201ENST00000449481 213 ntBASIC0.43□□□□□ -2.34
PDGFRBP09619 RNU6-774P-201ENST00000363238 107 ntBASIC0.42□□□□□ -2.34
PDGFRBP09619 Y_RNA.344-201ENST00000365381 112 ntBASIC0.42□□□□□ -2.34
PDGFRBP09619 MIR519A1-201ENST00000385257 85 ntBASIC0.42□□□□□ -2.34
PDGFRBP09619 SNORD63B-201ENST00000411005 70 ntBASIC0.42□□□□□ -2.34
PDGFRBP09619 RNA5SP134-201ENST00000516492 96 ntBASIC0.42□□□□□ -2.34
PDGFRBP09619 RNU6-1313P-201ENST00000362622 102 ntBASIC0.41□□□□□ -2.34
PDGFRBP09619 MIR548M-201ENST00000408260 86 ntBASIC0.41□□□□□ -2.34
PDGFRBP09619 RPL39P34-201ENST00000477141 156 ntBASIC0.41□□□□□ -2.34
PDGFRBP09619 AC067863.3-201ENST00000624172 122 ntBASIC0.41□□□□□ -2.34
PDGFRBP09619 U6.95-201ENST00000636931 70 ntBASIC0.41□□□□□ -2.34
PDGFRBP09619 MIR103A1-201ENST00000362165 78 ntBASIC0.4□□□□□ -2.35
PDGFRBP09619 Y_RNA.342-201ENST00000365352 113 ntBASIC0.4□□□□□ -2.35
PDGFRBP09619 VTRNA1-3-201ENST00000365645 89 ntBASIC0.4□□□□□ -2.35
PDGFRBP09619 RNU6-1126P-201ENST00000384002 107 ntBASIC0.4□□□□□ -2.35
PDGFRBP09619 RNU6-816P-201ENST00000390914 107 ntBASIC0.4□□□□□ -2.35
PDGFRBP09619 RNU6-1268P-201ENST00000391214 107 ntBASIC0.4□□□□□ -2.35
PDGFRBP09619 RNU6-1239P-201ENST00000391310 107 ntBASIC0.4□□□□□ -2.35
PDGFRBP09619 Y_RNA.630-201ENST00000411370 108 ntBASIC0.4□□□□□ -2.35
PDGFRBP09619 RNU7-107P-201ENST00000459121 61 ntBASIC0.4□□□□□ -2.35
PDGFRBP09619 RNU7-104P-201ENST00000459398 79 ntBASIC0.4□□□□□ -2.35
PDGFRBP09619 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.4□□□□□ -2.35
PDGFRBP09619 Y_RNA.809-201ENST00000516058 95 ntBASIC0.4□□□□□ -2.35
PDGFRBP09619 RNU6-850P-201ENST00000516934 103 ntBASIC0.4□□□□□ -2.35
PDGFRBP09619 Y_RNA.712-201ENST00000517011 92 ntBASIC0.4□□□□□ -2.35
PDGFRBP09619 AL162726.3-218ENST00000636401 95 ntBASIC0.4□□□□□ -2.35
PDGFRBP09619 Y_RNA.85-201ENST00000363014 111 ntBASIC0.39□□□□□ -2.35
PDGFRBP09619 RNA5SP62-201ENST00000363457 110 ntBASIC0.39□□□□□ -2.35
PDGFRBP09619 SNORD38.1-201ENST00000363863 68 ntBASIC0.39□□□□□ -2.35
PDGFRBP09619 Y_RNA.362-201ENST00000365518 110 ntBASIC0.39□□□□□ -2.35
PDGFRBP09619 RNU6-716P-201ENST00000365621 103 ntBASIC0.39□□□□□ -2.35
PDGFRBP09619 RNU6-848P-201ENST00000515948 107 ntBASIC0.39□□□□□ -2.35
PDGFRBP09619 RNU6-617P-201ENST00000516147 107 ntBASIC0.39□□□□□ -2.35
PDGFRBP09619 RNU6-473P-201ENST00000516164 107 ntBASIC0.39□□□□□ -2.35
PDGFRBP09619 RNU6-1049P-201ENST00000516414 107 ntBASIC0.39□□□□□ -2.35
PDGFRBP09619 Y_RNA.309-201ENST00000365046 111 ntBASIC0.38□□□□□ -2.35
PDGFRBP09619 AC069271.1-201ENST00000445577 156 ntBASIC0.38□□□□□ -2.35
PDGFRBP09619 SPINT5P-201ENST00000448174 155 ntBASIC0.38□□□□□ -2.35
PDGFRBP09619 Y_RNA.649-201ENST00000459077 103 ntBASIC0.38□□□□□ -2.35
PDGFRBP09619 MIR4679-2-201ENST00000578358 77 ntBASIC0.38□□□□□ -2.35
PDGFRBP09619 MIR8087-201ENST00000612745 78 ntBASIC0.38□□□□□ -2.35
PDGFRBP09619 MIR3914-2-201ENST00000637339 95 ntBASIC0.38□□□□□ -2.35
PDGFRBP09619 RNA5SP403-201ENST00000363598 108 ntBASIC0.37□□□□□ -2.35
PDGFRBP09619 Y_RNA.221-201ENST00000364248 96 ntBASIC0.37□□□□□ -2.35
PDGFRBP09619 RNU7-161P-201ENST00000517289 62 ntBASIC0.37□□□□□ -2.35
PDGFRBP09619 RNU6-90P-201ENST00000606352 106 ntBASIC0.37□□□□□ -2.35
PDGFRBP09619 Y_RNA.71-201ENST00000362892 104 ntBASIC0.36□□□□□ -2.35
PDGFRBP09619 Y_RNA.115-201ENST00000363272 98 ntBASIC0.36□□□□□ -2.35
PDGFRBP09619 AC073261.1-201ENST00000429409 121 ntBASIC0.36□□□□□ -2.35
PDGFRBP09619 RNU7-195P-201ENST00000458793 62 ntBASIC0.36□□□□□ -2.35
PDGFRBP09619 AC007012.1-201ENST00000567192 175 ntBASIC0.36□□□□□ -2.35
PDGFRBP09619 AC096720.1-201ENST00000604441 183 ntBASIC0.36□□□□□ -2.35
PDGFRBP09619 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.36□□□□□ -2.35
PDGFRBP09619 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.36□□□□□ -2.35
PDGFRBP09619 MIR330-201ENST00000362196 94 ntBASIC0.35□□□□□ -2.35
PDGFRBP09619 RNU6-1260P-201ENST00000362944 107 ntBASIC0.35□□□□□ -2.35
PDGFRBP09619 RNA5SP457-201ENST00000363657 124 ntBASIC0.35□□□□□ -2.35
PDGFRBP09619 RNU6-726P-201ENST00000364680 107 ntBASIC0.35□□□□□ -2.35
PDGFRBP09619 RNU6-659P-201ENST00000516454 104 ntBASIC0.35□□□□□ -2.35
PDGFRBP09619 SNORA62.5-201ENST00000516634 120 ntBASIC0.35□□□□□ -2.35
PDGFRBP09619 RNA5SP330-201ENST00000517096 96 ntBASIC0.35□□□□□ -2.35
PDGFRBP09619 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.35□□□□□ -2.35
PDGFRBP09619 SNORD116-14-201ENST00000383894 92 ntBASIC0.34□□□□□ -2.36
PDGFRBP09619 SNORD116-17-201ENST00000383929 92 ntBASIC0.34□□□□□ -2.36
PDGFRBP09619 SNORD116-15-201ENST00000384445 92 ntBASIC0.34□□□□□ -2.36
PDGFRBP09619 SNORD116-19-201ENST00000384729 92 ntBASIC0.34□□□□□ -2.36
PDGFRBP09619 MIR548A3-201ENST00000385297 97 ntBASIC0.34□□□□□ -2.36
PDGFRBP09619 MIR548G-201ENST00000408442 89 ntBASIC0.34□□□□□ -2.36
PDGFRBP09619 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.34□□□□□ -2.36
PDGFRBP09619 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
PDGFRBP09619 Y_RNA.35-201ENST00000362601 101 ntBASIC0.33□□□□□ -2.36
PDGFRBP09619 Y_RNA.218-201ENST00000364218 104 ntBASIC0.33□□□□□ -2.36
PDGFRBP09619 Y_RNA.423-201ENST00000384057 113 ntBASIC0.33□□□□□ -2.36
PDGFRBP09619 RNU6-187P-201ENST00000384139 106 ntBASIC0.33□□□□□ -2.36
PDGFRBP09619 AC108740.1-201ENST00000498629 225 ntBASIC0.33□□□□□ -2.36
PDGFRBP09619 AL442128.1-201ENST00000615151 90 ntBASIC0.33□□□□□ -2.36
PDGFRBP09619 SNORA9.1-201ENST00000362412 131 ntBASIC0.31□□□□□ -2.36
PDGFRBP09619 Y_RNA.258-201ENST00000364613 105 ntBASIC0.31□□□□□ -2.36
PDGFRBP09619 SNORA2A-201ENST00000383885 135 ntBASIC0.31□□□□□ -2.36
PDGFRBP09619 SNORD41.1-201ENST00000391000 69 ntBASIC0.31□□□□□ -2.36
PDGFRBP09619 MIR1197-201ENST00000408818 88 ntBASIC0.31□□□□□ -2.36
PDGFRBP09619 TMSB4XP3-201ENST00000445144 114 ntBASIC0.31□□□□□ -2.36
PDGFRBP09619 RNU6-1006P-201ENST00000516998 103 ntBASIC0.31□□□□□ -2.36
PDGFRBP09619 AL670379.3-201ENST00000605040 251 ntBASIC0.31□□□□□ -2.36
PDGFRBP09619 Y_RNA.57-201ENST00000362806 113 ntBASIC0.3□□□□□ -2.36
PDGFRBP09619 RNU6-1201P-201ENST00000384227 107 ntBASIC0.3□□□□□ -2.36
PDGFRBP09619 Y_RNA.525-201ENST00000384570 113 ntBASIC0.3□□□□□ -2.36
PDGFRBP09619 RNU6-1254P-201ENST00000391266 104 ntBASIC0.3□□□□□ -2.36
PDGFRBP09619 RNU7-74P-201ENST00000459104 62 ntBASIC0.3□□□□□ -2.36
PDGFRBP09619 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.3□□□□□ -2.36
PDGFRBP09619 RNU7-13P-201ENST00000516413 62 ntBASIC0.3□□□□□ -2.36
PDGFRBP09619 AC069113.3-201ENST00000521019 150 ntBASIC0.3□□□□□ -2.36
PDGFRBP09619 MIR4514-201ENST00000581410 57 ntBASIC0.3□□□□□ -2.36
PDGFRBP09619 AL109933.3-201ENST00000619095 188 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 170.8 ms