Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 RNU6-260P-201ENST00000384092 107 ntBASIC-1.79□□□□□ -2.7
TNFP01375 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC-1.79□□□□□ -2.7
TNFP01375 SNRPGP8-201ENST00000454064 226 ntBASIC-1.79□□□□□ -2.7
TNFP01375 AC082651.2-201ENST00000496833 166 ntBASIC-1.79□□□□□ -2.7
TNFP01375 AC097484.2-201ENST00000509147 251 ntBASIC-1.79□□□□□ -2.7
TNFP01375 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-1.79□□□□□ -2.7
TNFP01375 ZNF519P2-201ENST00000557032 169 ntBASIC-1.79□□□□□ -2.7
TNFP01375 RNU6-89P-201ENST00000606519 100 ntBASIC-1.79□□□□□ -2.7
TNFP01375 Y_RNA.79-201ENST00000362992 113 ntBASIC-1.8□□□□□ -2.7
TNFP01375 RNU6-832P-201ENST00000363319 107 ntBASIC-1.8□□□□□ -2.7
TNFP01375 Y_RNA.230-201ENST00000364348 109 ntBASIC-1.8□□□□□ -2.7
TNFP01375 RNU4-24P-201ENST00000364565 139 ntBASIC-1.8□□□□□ -2.7
TNFP01375 SNORD113-3-201ENST00000364830 72 ntBASIC-1.8□□□□□ -2.7
TNFP01375 MT-TH-201ENST00000387441 69 ntBASIC-1.8□□□□□ -2.7
TNFP01375 RNU6-763P-201ENST00000390865 106 ntBASIC-1.8□□□□□ -2.7
TNFP01375 Y_RNA.618-201ENST00000410949 107 ntBASIC-1.8□□□□□ -2.7
TNFP01375 MTND1P2-201ENST00000430604 821 ntBASIC-1.8□□□□□ -2.7
TNFP01375 MTND2P22-201ENST00000444325 1033 ntBASIC-1.8□□□□□ -2.7
TNFP01375 MTND2P39-201ENST00000457230 764 ntBASIC-1.8□□□□□ -2.7
TNFP01375 RN7SKP295-201ENST00000517264 153 ntBASIC-1.8□□□□□ -2.7
TNFP01375 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC-1.8□□□□□ -2.7
TNFP01375 ELOCP32-201ENST00000548625 324 ntBASIC-1.8□□□□□ -2.7
TNFP01375 MIR5693-201ENST00000577722 73 ntBASIC-1.8□□□□□ -2.7
TNFP01375 MIR3657-201ENST00000584818 117 ntBASIC-1.8□□□□□ -2.7
TNFP01375 AC097520.1-201ENST00000624435 385 ntBASIC-1.8□□□□□ -2.7
TNFP01375 RNU6-598P-201ENST00000364017 105 ntBASIC-1.81□□□□□ -2.7
TNFP01375 RNU6-382P-201ENST00000365181 106 ntBASIC-1.81□□□□□ -2.7
TNFP01375 SNORD116-11-201ENST00000383882 92 ntBASIC-1.81□□□□□ -2.7
TNFP01375 Y_RNA.512-201ENST00000384518 102 ntBASIC-1.81□□□□□ -2.7
TNFP01375 Y_RNA.570-201ENST00000384750 101 ntBASIC-1.81□□□□□ -2.7
TNFP01375 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.81□□□□□ -2.7
TNFP01375 RNU6-62P-201ENST00000516526 102 ntBASIC-1.81□□□□□ -2.7
TNFP01375 RNU6-256P-201ENST00000516747 97 ntBASIC-1.81□□□□□ -2.7
TNFP01375 RNU6-1149P-201ENST00000516810 97 ntBASIC-1.81□□□□□ -2.7
TNFP01375 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-1.81□□□□□ -2.7
TNFP01375 DLEU2_5.2-201ENST00000610606 84 ntBASIC-1.81□□□□□ -2.7
TNFP01375 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.81□□□□□ -2.7
TNFP01375 Y_RNA.8-201ENST00000362353 102 ntBASIC-1.82□□□□□ -2.7
TNFP01375 RNU6-1079P-201ENST00000362861 110 ntBASIC-1.82□□□□□ -2.7
TNFP01375 Y_RNA.134-201ENST00000363435 105 ntBASIC-1.82□□□□□ -2.7
TNFP01375 Y_RNA.813-201ENST00000364639 102 ntBASIC-1.82□□□□□ -2.7
TNFP01375 Y_RNA.394-201ENST00000383942 103 ntBASIC-1.82□□□□□ -2.7
TNFP01375 Y_RNA.420-201ENST00000384043 110 ntBASIC-1.82□□□□□ -2.7
TNFP01375 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.82□□□□□ -2.7
TNFP01375 RNY1P6-201ENST00000384193 109 ntBASIC-1.82□□□□□ -2.7
TNFP01375 RNY3P14-201ENST00000384309 102 ntBASIC-1.82□□□□□ -2.7
TNFP01375 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.82□□□□□ -2.7
TNFP01375 RNU6-651P-201ENST00000411040 105 ntBASIC-1.82□□□□□ -2.7
TNFP01375 AL593851.1-201ENST00000426171 157 ntBASIC-1.82□□□□□ -2.7
TNFP01375 RNU6-893P-201ENST00000458841 100 ntBASIC-1.82□□□□□ -2.7
TNFP01375 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.82□□□□□ -2.7
TNFP01375 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.82□□□□□ -2.7
TNFP01375 RNU6-803P-201ENST00000516034 102 ntBASIC-1.82□□□□□ -2.7
TNFP01375 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.82□□□□□ -2.7
TNFP01375 AC107308.1-201ENST00000615897 301 ntBASIC-1.82□□□□□ -2.7
TNFP01375 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.82□□□□□ -2.7
TNFP01375 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.82□□□□□ -2.7
TNFP01375 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.82□□□□□ -2.7
TNFP01375 U6.97-201ENST00000636904 101 ntBASIC-1.82□□□□□ -2.7
TNFP01375 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.82□□□□□ -2.7
TNFP01375 Y_RNA.173-201ENST00000363776 113 ntBASIC-1.83□□□□□ -2.7
TNFP01375 RNU6-1103P-201ENST00000384150 107 ntBASIC-1.83□□□□□ -2.7
TNFP01375 MIR521-2-201ENST00000384818 87 ntBASIC-1.83□□□□□ -2.7
TNFP01375 RNU6-648P-201ENST00000410190 107 ntBASIC-1.83□□□□□ -2.7
TNFP01375 RNU4-69P-201ENST00000410677 143 ntBASIC-1.83□□□□□ -2.7
TNFP01375 RNU2-72P-201ENST00000411175 163 ntBASIC-1.83□□□□□ -2.7
TNFP01375 SNORD5.1-201ENST00000458800 75 ntBASIC-1.83□□□□□ -2.7
TNFP01375 RNU7-85P-201ENST00000458851 63 ntBASIC-1.83□□□□□ -2.7
TNFP01375 RNU6-358P-201ENST00000516564 75 ntBASIC-1.83□□□□□ -2.7
TNFP01375 SNX3P1Y-201ENST00000615757 176 ntBASIC-1.83□□□□□ -2.7
TNFP01375 RNU6-1277P-201ENST00000364561 107 ntBASIC-1.84□□□□□ -2.7
TNFP01375 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.84□□□□□ -2.7
TNFP01375 SNORD115-47-201ENST00000391226 86 ntBASIC-1.84□□□□□ -2.7
TNFP01375 Y_RNA.793-201ENST00000411222 111 ntBASIC-1.84□□□□□ -2.7
TNFP01375 Y_RNA.655-201ENST00000515919 96 ntBASIC-1.84□□□□□ -2.7
TNFP01375 RNU6-415P-201ENST00000516252 97 ntBASIC-1.84□□□□□ -2.7
TNFP01375 RNU7-70P-201ENST00000516941 66 ntBASIC-1.84□□□□□ -2.7
TNFP01375 Y_RNA.721-201ENST00000517207 102 ntBASIC-1.84□□□□□ -2.7
TNFP01375 MIR5692C2-201ENST00000577959 77 ntBASIC-1.84□□□□□ -2.7
TNFP01375 MIR3170-201ENST00000582699 77 ntBASIC-1.84□□□□□ -2.7
TNFP01375 AL365205.2-201ENST00000594586 68 ntBASIC-1.84□□□□□ -2.7
TNFP01375 Y_RNA.773-201ENST00000607168 90 ntBASIC-1.84□□□□□ -2.7
TNFP01375 AC048344.4-201ENST00000619744 527 ntBASIC-1.84□□□□□ -2.7
TNFP01375 U2.18-201ENST00000622185 84 ntBASIC-1.84□□□□□ -2.7
TNFP01375 U6.106-201ENST00000636360 105 ntBASIC-1.84□□□□□ -2.7
TNFP01375 SNORA63.2-201ENST00000362603 126 ntBASIC-1.85□□□□□ -2.71
TNFP01375 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.85□□□□□ -2.71
TNFP01375 Y_RNA.357-201ENST00000365487 109 ntBASIC-1.85□□□□□ -2.71
TNFP01375 Y_RNA.519-201ENST00000384553 102 ntBASIC-1.85□□□□□ -2.71
TNFP01375 Y_RNA.542-201ENST00000384641 111 ntBASIC-1.85□□□□□ -2.71
TNFP01375 MTND4P28-201ENST00000426217 387 ntBASIC-1.85□□□□□ -2.71
TNFP01375 Y_RNA.690-201ENST00000516603 95 ntBASIC-1.85□□□□□ -2.71
TNFP01375 Y_RNA.704-201ENST00000516851 102 ntBASIC-1.85□□□□□ -2.71
TNFP01375 AL365265.1-201ENST00000621045 234 ntBASIC-1.85□□□□□ -2.71
TNFP01375 AP000720.1-201ENST00000625091 483 ntBASIC-1.85□□□□□ -2.71
TNFP01375 RNY4P9-201ENST00000363194 97 ntBASIC-1.86□□□□□ -2.71
TNFP01375 Y_RNA.201-201ENST00000364052 96 ntBASIC-1.86□□□□□ -2.71
TNFP01375 RNU6-144P-201ENST00000383951 107 ntBASIC-1.86□□□□□ -2.71
TNFP01375 RNU6-458P-201ENST00000384179 107 ntBASIC-1.86□□□□□ -2.71
TNFP01375 MT-TT-201ENST00000387460 66 ntBASIC-1.86□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 200.6 ms