Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 AC004223.1-201ENST00000479840 271 ntBASIC1.44□□□□□ -2.18
PRPF40AO75400 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.44□□□□□ -2.18
PRPF40AO75400 AL353770.2-201ENST00000620024 78 ntBASIC1.44□□□□□ -2.18
PRPF40AO75400 AC025521.1-201ENST00000621624 286 ntBASIC1.44□□□□□ -2.18
PRPF40AO75400 RNU6-49P-201ENST00000384256 107 ntBASIC1.43□□□□□ -2.18
PRPF40AO75400 RNU6-939P-201ENST00000384634 107 ntBASIC1.43□□□□□ -2.18
PRPF40AO75400 RNY1P7-201ENST00000384743 110 ntBASIC1.43□□□□□ -2.18
PRPF40AO75400 MIR516A2-201ENST00000384888 90 ntBASIC1.43□□□□□ -2.18
PRPF40AO75400 MIR516A1-201ENST00000385033 90 ntBASIC1.43□□□□□ -2.18
PRPF40AO75400 AL513043.2-201ENST00000573941 143 ntBASIC1.43□□□□□ -2.18
PRPF40AO75400 AC025627.3-201ENST00000582078 182 ntBASIC1.43□□□□□ -2.18
PRPF40AO75400 AC006254.2-201ENST00000603259 279 ntBASIC1.43□□□□□ -2.18
PRPF40AO75400 MIR337-201ENST00000362281 93 ntBASIC1.42□□□□□ -2.18
PRPF40AO75400 RNY1P10-201ENST00000363268 113 ntBASIC1.42□□□□□ -2.18
PRPF40AO75400 RNU6-291P-201ENST00000384720 107 ntBASIC1.42□□□□□ -2.18
PRPF40AO75400 RNU6-243P-201ENST00000391140 107 ntBASIC1.42□□□□□ -2.18
PRPF40AO75400 RNU6-1254P-201ENST00000391266 104 ntBASIC1.42□□□□□ -2.18
PRPF40AO75400 AC092628.1-201ENST00000436250 252 ntBASIC1.42□□□□□ -2.18
PRPF40AO75400 TRAJ51-201ENST00000504127 63 ntBASIC1.41□□□□□ -2.18
PRPF40AO75400 AC138907.6-201ENST00000568401 126 ntBASIC1.41□□□□□ -2.18
PRPF40AO75400 AC138869.1-201ENST00000568623 124 ntBASIC1.41□□□□□ -2.18
PRPF40AO75400 MIR3660-201ENST00000584845 100 ntBASIC1.41□□□□□ -2.18
PRPF40AO75400 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
PRPF40AO75400 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.4□□□□□ -2.19
PRPF40AO75400 SNORA40.6-201ENST00000391153 128 ntBASIC1.4□□□□□ -2.19
PRPF40AO75400 RNU6-844P-201ENST00000517175 102 ntBASIC1.4□□□□□ -2.19
PRPF40AO75400 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
PRPF40AO75400 RNU6-294P-201ENST00000364999 102 ntBASIC1.39□□□□□ -2.19
PRPF40AO75400 RNA5SP255-201ENST00000516370 107 ntBASIC1.39□□□□□ -2.19
PRPF40AO75400 Y_RNA.174-201ENST00000363781 105 ntBASIC1.38□□□□□ -2.19
PRPF40AO75400 Y_RNA.190-201ENST00000363964 101 ntBASIC1.38□□□□□ -2.19
PRPF40AO75400 RNU7-195P-201ENST00000458793 62 ntBASIC1.38□□□□□ -2.19
PRPF40AO75400 RNU7-106P-201ENST00000459514 67 ntBASIC1.38□□□□□ -2.19
PRPF40AO75400 Y_RNA.809-201ENST00000516058 95 ntBASIC1.38□□□□□ -2.19
PRPF40AO75400 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.37□□□□□ -2.19
PRPF40AO75400 RNU6-392P-201ENST00000364926 101 ntBASIC1.37□□□□□ -2.19
PRPF40AO75400 RNU6-1134P-201ENST00000365156 101 ntBASIC1.37□□□□□ -2.19
PRPF40AO75400 RNA5SP117-201ENST00000365294 118 ntBASIC1.37□□□□□ -2.19
PRPF40AO75400 MIR6078-201ENST00000611069 100 ntBASIC1.37□□□□□ -2.19
PRPF40AO75400 RNU6-1335P-201ENST00000365426 107 ntBASIC1.36□□□□□ -2.19
PRPF40AO75400 MIR519A1-201ENST00000385257 85 ntBASIC1.36□□□□□ -2.19
PRPF40AO75400 MIR1285-1-201ENST00000408593 84 ntBASIC1.36□□□□□ -2.19
PRPF40AO75400 AC097635.1-201ENST00000450678 155 ntBASIC1.36□□□□□ -2.19
PRPF40AO75400 AC026421.1-201ENST00000519101 163 ntBASIC1.36□□□□□ -2.19
PRPF40AO75400 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.36□□□□□ -2.19
PRPF40AO75400 SNORD36A-201ENST00000362874 73 ntBASIC1.35□□□□□ -2.19
PRPF40AO75400 AC002350.1-201ENST00000490759 375 ntBASIC1.35□□□□□ -2.19
PRPF40AO75400 Y_RNA.32-201ENST00000362589 110 ntBASIC1.34□□□□□ -2.19
PRPF40AO75400 Y_RNA.558-201ENST00000384685 113 ntBASIC1.34□□□□□ -2.19
PRPF40AO75400 MIR599-201ENST00000385069 95 ntBASIC1.34□□□□□ -2.19
PRPF40AO75400 RNU6-466P-201ENST00000391224 103 ntBASIC1.34□□□□□ -2.19
PRPF40AO75400 Y_RNA.609-201ENST00000410669 89 ntBASIC1.34□□□□□ -2.19
PRPF40AO75400 Y_RNA.648-201ENST00000459455 110 ntBASIC1.34□□□□□ -2.19
PRPF40AO75400 SNORA31.14-201ENST00000516728 116 ntBASIC1.34□□□□□ -2.19
PRPF40AO75400 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.34□□□□□ -2.19
PRPF40AO75400 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.2
PRPF40AO75400 RNA5SP245-201ENST00000364239 121 ntBASIC1.33□□□□□ -2.2
PRPF40AO75400 MIR573-201ENST00000384964 99 ntBASIC1.33□□□□□ -2.2
PRPF40AO75400 RNU6-519P-201ENST00000410590 108 ntBASIC1.33□□□□□ -2.2
PRPF40AO75400 RNU6-469P-201ENST00000516253 101 ntBASIC1.33□□□□□ -2.2
PRPF40AO75400 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.33□□□□□ -2.2
PRPF40AO75400 uc_338.16-201ENST00000621804 95 ntBASIC1.33□□□□□ -2.2
PRPF40AO75400 SNORD99-201ENST00000408612 74 ntBASIC1.32□□□□□ -2.2
PRPF40AO75400 MIR8070-201ENST00000616510 88 ntBASIC1.32□□□□□ -2.2
PRPF40AO75400 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.32□□□□□ -2.2
PRPF40AO75400 RNU6-1260P-201ENST00000362944 107 ntBASIC1.31□□□□□ -2.2
PRPF40AO75400 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
PRPF40AO75400 SNORD116-22-201ENST00000384430 92 ntBASIC1.31□□□□□ -2.2
PRPF40AO75400 MIR4661-201ENST00000582720 75 ntBASIC1.31□□□□□ -2.2
PRPF40AO75400 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.31□□□□□ -2.2
PRPF40AO75400 RNA5SP247-201ENST00000411181 105 ntBASIC1.3□□□□□ -2.2
PRPF40AO75400 AC244505.6-201ENST00000452829 130 ntBASIC1.3□□□□□ -2.2
PRPF40AO75400 AC011195.1-201ENST00000578177 177 ntBASIC1.3□□□□□ -2.2
PRPF40AO75400 snoU13.11-201ENST00000459219 104 ntBASIC1.29□□□□□ -2.2
PRPF40AO75400 RNU6-65P-201ENST00000516332 98 ntBASIC1.29□□□□□ -2.2
PRPF40AO75400 RNU6-135P-201ENST00000516769 101 ntBASIC1.29□□□□□ -2.2
PRPF40AO75400 MIR3612-201ENST00000579753 87 ntBASIC1.29□□□□□ -2.2
PRPF40AO75400 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
PRPF40AO75400 RNU6-524P-201ENST00000384270 107 ntBASIC1.28□□□□□ -2.2
PRPF40AO75400 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.21
PRPF40AO75400 RNY1P4-201ENST00000384595 115 ntBASIC1.27□□□□□ -2.21
PRPF40AO75400 AL161932.1-201ENST00000437408 146 ntBASIC1.27□□□□□ -2.21
PRPF40AO75400 MIR4536-1-201ENST00000583537 88 ntBASIC1.27□□□□□ -2.21
PRPF40AO75400 Y_RNA.221-201ENST00000364248 96 ntBASIC1.26□□□□□ -2.21
PRPF40AO75400 Y_RNA.226-201ENST00000364337 114 ntBASIC1.26□□□□□ -2.21
PRPF40AO75400 Y_RNA.283-201ENST00000364798 112 ntBASIC1.26□□□□□ -2.21
PRPF40AO75400 SNORA25.9-201ENST00000365087 128 ntBASIC1.26□□□□□ -2.21
PRPF40AO75400 OR2A41P-201ENST00000473586 105 ntBASIC1.26□□□□□ -2.21
PRPF40AO75400 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.26□□□□□ -2.21
PRPF40AO75400 MIR4668-201ENST00000582284 70 ntBASIC1.26□□□□□ -2.21
PRPF40AO75400 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.26□□□□□ -2.21
PRPF40AO75400 Y_RNA.17-201ENST00000362433 111 ntBASIC1.25□□□□□ -2.21
PRPF40AO75400 SNORD115-24-201ENST00000363528 82 ntBASIC1.25□□□□□ -2.21
PRPF40AO75400 RNU6-957P-201ENST00000363652 99 ntBASIC1.25□□□□□ -2.21
PRPF40AO75400 MIR644A-201ENST00000385262 94 ntBASIC1.25□□□□□ -2.21
PRPF40AO75400 RNU6-402P-201ENST00000410678 103 ntBASIC1.25□□□□□ -2.21
PRPF40AO75400 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.25□□□□□ -2.21
PRPF40AO75400 TRDV1-202ENST00000621643 102 ntBASIC1.25□□□□□ -2.21
PRPF40AO75400 RNU6-1229P-201ENST00000364295 107 ntBASIC1.24□□□□□ -2.21
PRPF40AO75400 AL353765.1-201ENST00000605514 183 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 188.4 ms