Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 Y_RNA.13-201ENST00000362403 112 ntBASIC1.56□□□□□ -2.16
SRGAP3O43295 Y_RNA.316-201ENST00000365118 111 ntBASIC1.56□□□□□ -2.16
SRGAP3O43295 RNU6-934P-201ENST00000365154 107 ntBASIC1.56□□□□□ -2.16
SRGAP3O43295 RNU1-78P-201ENST00000391248 165 ntBASIC1.56□□□□□ -2.16
SRGAP3O43295 MIR934-201ENST00000401241 83 ntBASIC1.56□□□□□ -2.16
SRGAP3O43295 SNORD63B-201ENST00000411005 70 ntBASIC1.56□□□□□ -2.16
SRGAP3O43295 RNU6-857P-201ENST00000515893 110 ntBASIC1.56□□□□□ -2.16
SRGAP3O43295 RNU7-153P-201ENST00000516455 62 ntBASIC1.56□□□□□ -2.16
SRGAP3O43295 AC036111.3-201ENST00000526389 112 ntBASIC1.56□□□□□ -2.16
SRGAP3O43295 AL359821.1-201ENST00000605519 182 ntBASIC1.56□□□□□ -2.16
SRGAP3O43295 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.56□□□□□ -2.16
SRGAP3O43295 Y_RNA.244-201ENST00000364484 109 ntBASIC1.55□□□□□ -2.16
SRGAP3O43295 RNU6-279P-201ENST00000391297 101 ntBASIC1.55□□□□□ -2.16
SRGAP3O43295 MIR1236-201ENST00000408340 102 ntBASIC1.55□□□□□ -2.16
SRGAP3O43295 SNORD100-201ENST00000408573 76 ntBASIC1.55□□□□□ -2.16
SRGAP3O43295 RNU6-955P-201ENST00000410497 104 ntBASIC1.55□□□□□ -2.16
SRGAP3O43295 TRMT112P2-201ENST00000512910 132 ntBASIC1.55□□□□□ -2.16
SRGAP3O43295 RNU6-1194P-201ENST00000516208 104 ntBASIC1.55□□□□□ -2.16
SRGAP3O43295 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.55□□□□□ -2.16
SRGAP3O43295 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
SRGAP3O43295 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
SRGAP3O43295 SNORD36A-201ENST00000362874 73 ntBASIC1.54□□□□□ -2.16
SRGAP3O43295 Y_RNA.363-201ENST00000365529 113 ntBASIC1.54□□□□□ -2.16
SRGAP3O43295 RNU6-466P-201ENST00000391224 103 ntBASIC1.54□□□□□ -2.16
SRGAP3O43295 MIR1287-201ENST00000408492 90 ntBASIC1.54□□□□□ -2.16
SRGAP3O43295 RPS29P23-201ENST00000458635 123 ntBASIC1.54□□□□□ -2.16
SRGAP3O43295 RNU7-106P-201ENST00000459514 67 ntBASIC1.54□□□□□ -2.16
SRGAP3O43295 RNU6-65P-201ENST00000516332 98 ntBASIC1.54□□□□□ -2.16
SRGAP3O43295 RNA5SP395-201ENST00000516567 118 ntBASIC1.54□□□□□ -2.16
SRGAP3O43295 MIR6082-201ENST00000613604 109 ntBASIC1.54□□□□□ -2.16
SRGAP3O43295 Y_RNA.327-201ENST00000365201 102 ntBASIC1.53□□□□□ -2.16
SRGAP3O43295 MIR635-201ENST00000384830 98 ntBASIC1.53□□□□□ -2.16
SRGAP3O43295 RNU6-910P-201ENST00000390844 107 ntBASIC1.53□□□□□ -2.16
SRGAP3O43295 AL591704.2-201ENST00000421658 181 ntBASIC1.53□□□□□ -2.16
SRGAP3O43295 RNU7-40P-201ENST00000516397 64 ntBASIC1.53□□□□□ -2.16
SRGAP3O43295 MIR4536-1-201ENST00000583537 88 ntBASIC1.53□□□□□ -2.16
SRGAP3O43295 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
SRGAP3O43295 Y_RNA.536-201ENST00000384621 113 ntBASIC1.52□□□□□ -2.17
SRGAP3O43295 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
SRGAP3O43295 RNU6-994P-201ENST00000410507 111 ntBASIC1.52□□□□□ -2.17
SRGAP3O43295 RNU6-902P-201ENST00000517212 91 ntBASIC1.52□□□□□ -2.17
SRGAP3O43295 MIR548H5-201ENST00000580314 60 ntBASIC1.52□□□□□ -2.17
SRGAP3O43295 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
SRGAP3O43295 Y_RNA.283-201ENST00000364798 112 ntBASIC1.51□□□□□ -2.17
SRGAP3O43295 Y_RNA.508-201ENST00000384502 114 ntBASIC1.51□□□□□ -2.17
SRGAP3O43295 MIR125B2-201ENST00000385128 89 ntBASIC1.51□□□□□ -2.17
SRGAP3O43295 SNORD111-201ENST00000408139 94 ntBASIC1.51□□□□□ -2.17
SRGAP3O43295 RNU7-195P-201ENST00000458793 62 ntBASIC1.51□□□□□ -2.17
SRGAP3O43295 TRAJ51-201ENST00000504127 63 ntBASIC1.51□□□□□ -2.17
SRGAP3O43295 Y_RNA.697-201ENST00000516776 113 ntBASIC1.51□□□□□ -2.17
SRGAP3O43295 RNU7-10P-201ENST00000607194 63 ntBASIC1.51□□□□□ -2.17
SRGAP3O43295 AC106800.4-201ENST00000614905 153 ntBASIC1.51□□□□□ -2.17
SRGAP3O43295 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
SRGAP3O43295 RNU6-811P-201ENST00000384069 107 ntBASIC1.5□□□□□ -2.17
SRGAP3O43295 RNU7-156P-201ENST00000517214 74 ntBASIC1.5□□□□□ -2.17
SRGAP3O43295 AC140658.3-201ENST00000567603 271 ntBASIC1.5□□□□□ -2.17
SRGAP3O43295 MIR8070-201ENST00000616510 88 ntBASIC1.5□□□□□ -2.17
SRGAP3O43295 MIR337-201ENST00000362281 93 ntBASIC1.49□□□□□ -2.17
SRGAP3O43295 RNU6-957P-201ENST00000363652 99 ntBASIC1.49□□□□□ -2.17
SRGAP3O43295 RNU6-364P-201ENST00000384387 107 ntBASIC1.49□□□□□ -2.17
SRGAP3O43295 RNU6-24P-201ENST00000384440 107 ntBASIC1.49□□□□□ -2.17
SRGAP3O43295 SNORA80D-201ENST00000384488 135 ntBASIC1.49□□□□□ -2.17
SRGAP3O43295 RPS26P5-201ENST00000418544 335 ntBASIC1.49□□□□□ -2.17
SRGAP3O43295 RNU7-21P-201ENST00000459430 62 ntBASIC1.49□□□□□ -2.17
SRGAP3O43295 SNORA25.13-201ENST00000516395 103 ntBASIC1.49□□□□□ -2.17
SRGAP3O43295 MIR4285-201ENST00000581001 85 ntBASIC1.49□□□□□ -2.17
SRGAP3O43295 MIR4676-201ENST00000583078 72 ntBASIC1.49□□□□□ -2.17
SRGAP3O43295 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.49□□□□□ -2.17
SRGAP3O43295 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
SRGAP3O43295 Y_RNA.221-201ENST00000364248 96 ntBASIC1.48□□□□□ -2.17
SRGAP3O43295 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.48□□□□□ -2.17
SRGAP3O43295 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.48□□□□□ -2.17
SRGAP3O43295 RNU6-765P-201ENST00000516916 99 ntBASIC1.48□□□□□ -2.17
SRGAP3O43295 MIR4796-201ENST00000580742 81 ntBASIC1.48□□□□□ -2.17
SRGAP3O43295 MIR4712-201ENST00000583750 82 ntBASIC1.48□□□□□ -2.17
SRGAP3O43295 MIR7111-201ENST00000619751 72 ntBASIC1.48□□□□□ -2.17
SRGAP3O43295 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.48□□□□□ -2.17
SRGAP3O43295 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
SRGAP3O43295 Y_RNA.42-201ENST00000362660 108 ntBASIC1.47□□□□□ -2.17
SRGAP3O43295 Y_RNA.56-201ENST00000362798 112 ntBASIC1.47□□□□□ -2.17
SRGAP3O43295 RNU6-392P-201ENST00000364926 101 ntBASIC1.47□□□□□ -2.17
SRGAP3O43295 RNA5SP292-201ENST00000390974 118 ntBASIC1.47□□□□□ -2.17
SRGAP3O43295 AC092628.1-201ENST00000436250 252 ntBASIC1.47□□□□□ -2.17
SRGAP3O43295 RNU7-90P-201ENST00000459216 62 ntBASIC1.47□□□□□ -2.17
SRGAP3O43295 RNU6-75P-201ENST00000515944 104 ntBASIC1.47□□□□□ -2.17
SRGAP3O43295 Y_RNA.809-201ENST00000516058 95 ntBASIC1.47□□□□□ -2.17
SRGAP3O43295 SNORD92-201ENST00000585078 85 ntBASIC1.47□□□□□ -2.17
SRGAP3O43295 MIR6078-201ENST00000611069 100 ntBASIC1.47□□□□□ -2.17
SRGAP3O43295 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.47□□□□□ -2.17
SRGAP3O43295 MIRLET7F1-201ENST00000362202 87 ntBASIC1.46□□□□□ -2.18
SRGAP3O43295 RNU6-132P-201ENST00000383863 107 ntBASIC1.46□□□□□ -2.18
SRGAP3O43295 MIR222-201ENST00000384992 110 ntBASIC1.46□□□□□ -2.18
SRGAP3O43295 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.46□□□□□ -2.18
SRGAP3O43295 SNORD79.1-201ENST00000516069 84 ntBASIC1.46□□□□□ -2.18
SRGAP3O43295 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.46□□□□□ -2.18
SRGAP3O43295 AC104996.3-201ENST00000590718 94 ntBASIC1.46□□□□□ -2.18
SRGAP3O43295 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
SRGAP3O43295 Y_RNA.94-201ENST00000363068 106 ntBASIC1.45□□□□□ -2.18
SRGAP3O43295 MIR100-201ENST00000385259 80 ntBASIC1.45□□□□□ -2.18
SRGAP3O43295 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 193.8 ms