Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 RNU6-539P-201ENST00000516665 103 ntBASIC1.74□□□□□ -2.13
RFXAPO00287 RNU1-92P-201ENST00000517017 135 ntBASIC1.74□□□□□ -2.13
RFXAPO00287 RNU6-208P-201ENST00000362431 107 ntBASIC1.73□□□□□ -2.13
RFXAPO00287 RNU6-330P-201ENST00000363015 107 ntBASIC1.73□□□□□ -2.13
RFXAPO00287 RNU6-466P-201ENST00000391224 103 ntBASIC1.73□□□□□ -2.13
RFXAPO00287 MIR1323-201ENST00000408090 73 ntBASIC1.73□□□□□ -2.13
RFXAPO00287 MIR2113-201ENST00000459007 91 ntBASIC1.73□□□□□ -2.13
RFXAPO00287 MIR2115-201ENST00000516657 100 ntBASIC1.73□□□□□ -2.13
RFXAPO00287 MIR4421-201ENST00000578133 69 ntBASIC1.73□□□□□ -2.13
RFXAPO00287 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.73□□□□□ -2.13
RFXAPO00287 MIR6779-201ENST00000617283 64 ntBASIC1.73□□□□□ -2.13
RFXAPO00287 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
RFXAPO00287 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
RFXAPO00287 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
RFXAPO00287 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.72□□□□□ -2.13
RFXAPO00287 MIR103A2-201ENST00000362154 78 ntBASIC1.72□□□□□ -2.13
RFXAPO00287 MIR96-201ENST00000362288 78 ntBASIC1.72□□□□□ -2.13
RFXAPO00287 RNU6-403P-201ENST00000363163 104 ntBASIC1.72□□□□□ -2.13
RFXAPO00287 RNU6-590P-201ENST00000365039 107 ntBASIC1.72□□□□□ -2.13
RFXAPO00287 RNU1-36P-201ENST00000365130 165 ntBASIC1.72□□□□□ -2.13
RFXAPO00287 MT-TF-201ENST00000387314 71 ntBASIC1.72□□□□□ -2.13
RFXAPO00287 MT-TN-201ENST00000387400 73 ntBASIC1.72□□□□□ -2.13
RFXAPO00287 SNORD100-201ENST00000408573 76 ntBASIC1.72□□□□□ -2.13
RFXAPO00287 SNORD93-201ENST00000408813 74 ntBASIC1.72□□□□□ -2.13
RFXAPO00287 RNU6-70P-201ENST00000516438 60 ntBASIC1.72□□□□□ -2.13
RFXAPO00287 RNU11-2P-201ENST00000516898 142 ntBASIC1.72□□□□□ -2.13
RFXAPO00287 SNORD92-201ENST00000585078 85 ntBASIC1.72□□□□□ -2.13
RFXAPO00287 AC013244.2-201ENST00000603396 103 ntBASIC1.72□□□□□ -2.13
RFXAPO00287 Y_RNA.386-201ENST00000383913 105 ntBASIC1.71□□□□□ -2.14
RFXAPO00287 SNORA67.6-201ENST00000391093 99 ntBASIC1.71□□□□□ -2.14
RFXAPO00287 MIR1265-201ENST00000408444 86 ntBASIC1.71□□□□□ -2.14
RFXAPO00287 HMGN2P19-201ENST00000425149 265 ntBASIC1.71□□□□□ -2.14
RFXAPO00287 RNU6-1194P-201ENST00000516208 104 ntBASIC1.71□□□□□ -2.14
RFXAPO00287 GHRLOS.1-201ENST00000610995 70 ntBASIC1.71□□□□□ -2.14
RFXAPO00287 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.7□□□□□ -2.14
RFXAPO00287 SNORD23.1-201ENST00000408212 104 ntBASIC1.7□□□□□ -2.14
RFXAPO00287 Y_RNA.660-201ENST00000516002 120 ntBASIC1.7□□□□□ -2.14
RFXAPO00287 AC019176.1-201ENST00000518519 225 ntBASIC1.7□□□□□ -2.14
RFXAPO00287 U6.100-201ENST00000636230 99 ntBASIC1.7□□□□□ -2.14
RFXAPO00287 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
RFXAPO00287 RNA5SP264-201ENST00000363115 107 ntBASIC1.69□□□□□ -2.14
RFXAPO00287 RNU4-58P-201ENST00000363192 141 ntBASIC1.69□□□□□ -2.14
RFXAPO00287 SNORD115-31-201ENST00000365318 82 ntBASIC1.69□□□□□ -2.14
RFXAPO00287 Y_RNA.536-201ENST00000384621 113 ntBASIC1.69□□□□□ -2.14
RFXAPO00287 MIR548U-201ENST00000390728 81 ntBASIC1.69□□□□□ -2.14
RFXAPO00287 SNORD83.1-201ENST00000411362 77 ntBASIC1.69□□□□□ -2.14
RFXAPO00287 AC074348.1-201ENST00000426503 132 ntBASIC1.69□□□□□ -2.14
RFXAPO00287 MIR3122-201ENST00000577243 73 ntBASIC1.69□□□□□ -2.14
RFXAPO00287 MIR3140-201ENST00000583685 90 ntBASIC1.69□□□□□ -2.14
RFXAPO00287 AL357312.1-201ENST00000603879 298 ntBASIC1.69□□□□□ -2.14
RFXAPO00287 TRDV1-202ENST00000621643 102 ntBASIC1.69□□□□□ -2.14
RFXAPO00287 AC023934.1-201ENST00000574529 2389 ntBASIC1.69□□□□□ -2.14
RFXAPO00287 Y_RNA.12-201ENST00000362393 112 ntBASIC1.68□□□□□ -2.14
RFXAPO00287 Y_RNA.13-201ENST00000362403 112 ntBASIC1.68□□□□□ -2.14
RFXAPO00287 SNORD48-201ENST00000364953 64 ntBASIC1.68□□□□□ -2.14
RFXAPO00287 RNU6-540P-201ENST00000384622 101 ntBASIC1.68□□□□□ -2.14
RFXAPO00287 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
RFXAPO00287 RNU6-634P-201ENST00000459134 106 ntBASIC1.68□□□□□ -2.14
RFXAPO00287 MIR8063-201ENST00000621930 81 ntBASIC1.68□□□□□ -2.14
RFXAPO00287 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.68□□□□□ -2.14
RFXAPO00287 MIR377-201ENST00000362145 69 ntBASIC1.67□□□□□ -2.14
RFXAPO00287 Y_RNA.340-201ENST00000365330 92 ntBASIC1.67□□□□□ -2.14
RFXAPO00287 RNU6-1051P-201ENST00000365471 102 ntBASIC1.67□□□□□ -2.14
RFXAPO00287 Y_RNA.596-201ENST00000410462 109 ntBASIC1.67□□□□□ -2.14
RFXAPO00287 RNU6-1054P-201ENST00000411293 104 ntBASIC1.67□□□□□ -2.14
RFXAPO00287 RNU6-303P-201ENST00000517091 106 ntBASIC1.67□□□□□ -2.14
RFXAPO00287 RNU6-165P-201ENST00000517170 99 ntBASIC1.67□□□□□ -2.14
RFXAPO00287 AC022709.1-201ENST00000615967 87 ntBASIC1.67□□□□□ -2.14
RFXAPO00287 MIR6515-201ENST00000619843 57 ntBASIC1.67□□□□□ -2.14
RFXAPO00287 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.67□□□□□ -2.14
RFXAPO00287 AC131280.1-202ENST00000624067 4211 ntBASIC1.67□□□□□ -2.14
RFXAPO00287 SNORD114-26-201ENST00000363543 72 ntBASIC1.66□□□□□ -2.14
RFXAPO00287 RNU6-580P-201ENST00000365159 107 ntBASIC1.66□□□□□ -2.14
RFXAPO00287 RNU6-587P-201ENST00000391282 106 ntBASIC1.66□□□□□ -2.14
RFXAPO00287 RNU7-185P-201ENST00000459215 60 ntBASIC1.66□□□□□ -2.14
RFXAPO00287 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.66□□□□□ -2.14
RFXAPO00287 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.66□□□□□ -2.14
RFXAPO00287 AL353770.2-201ENST00000620024 78 ntBASIC1.66□□□□□ -2.14
RFXAPO00287 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
RFXAPO00287 MIR302D-201ENST00000362275 68 ntBASIC1.65□□□□□ -2.15
RFXAPO00287 Y_RNA.207-201ENST00000364142 106 ntBASIC1.65□□□□□ -2.15
RFXAPO00287 RNU6-154P-201ENST00000384306 106 ntBASIC1.65□□□□□ -2.15
RFXAPO00287 RNU6-1241P-201ENST00000384536 107 ntBASIC1.65□□□□□ -2.15
RFXAPO00287 MIR17-201ENST00000385012 84 ntBASIC1.65□□□□□ -2.15
RFXAPO00287 RNU6-380P-201ENST00000410207 107 ntBASIC1.65□□□□□ -2.15
RFXAPO00287 AC092628.1-201ENST00000436250 252 ntBASIC1.65□□□□□ -2.15
RFXAPO00287 AL133373.1-201ENST00000497098 94 ntBASIC1.65□□□□□ -2.15
RFXAPO00287 Y_RNA.681-201ENST00000516445 113 ntBASIC1.65□□□□□ -2.15
RFXAPO00287 RNU6-807P-201ENST00000516805 107 ntBASIC1.65□□□□□ -2.15
RFXAPO00287 PVT1_3.1-201ENST00000620853 95 ntBASIC1.65□□□□□ -2.15
RFXAPO00287 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
RFXAPO00287 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
RFXAPO00287 AC244636.1-201ENST00000421152 228 ntBASIC1.64□□□□□ -2.15
RFXAPO00287 Y_RNA.809-201ENST00000516058 95 ntBASIC1.64□□□□□ -2.15
RFXAPO00287 Y_RNA.697-201ENST00000516776 113 ntBASIC1.64□□□□□ -2.15
RFXAPO00287 MIR4696-201ENST00000581431 70 ntBASIC1.64□□□□□ -2.15
RFXAPO00287 AL627230.6-201ENST00000611129 280 ntBASIC1.64□□□□□ -2.15
RFXAPO00287 MIR6082-201ENST00000613604 109 ntBASIC1.64□□□□□ -2.15
RFXAPO00287 AL773524.1-201ENST00000614065 229 ntBASIC1.64□□□□□ -2.15
RFXAPO00287 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 213.4 ms