Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AC103810.7-201ENST00000607821 91 ntBASIC1.72□□□□□ -2.13
TMEM88BA6NKF7 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
TMEM88BA6NKF7 SNORD114-27-201ENST00000363766 70 ntBASIC1.71□□□□□ -2.14
TMEM88BA6NKF7 RNU1-98P-201ENST00000458992 160 ntBASIC1.71□□□□□ -2.14
TMEM88BA6NKF7 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.71□□□□□ -2.14
TMEM88BA6NKF7 Y_RNA.697-201ENST00000516776 113 ntBASIC1.71□□□□□ -2.14
TMEM88BA6NKF7 MIR548Z-201ENST00000584743 97 ntBASIC1.71□□□□□ -2.14
TMEM88BA6NKF7 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.7□□□□□ -2.14
TMEM88BA6NKF7 RNU6-1131P-201ENST00000364955 107 ntBASIC1.7□□□□□ -2.14
TMEM88BA6NKF7 MIR520F-201ENST00000384824 87 ntBASIC1.7□□□□□ -2.14
TMEM88BA6NKF7 MIR635-201ENST00000384830 98 ntBASIC1.7□□□□□ -2.14
TMEM88BA6NKF7 SUMO2P12-201ENST00000405924 140 ntBASIC1.7□□□□□ -2.14
TMEM88BA6NKF7 RNU6-1110P-201ENST00000516462 101 ntBASIC1.7□□□□□ -2.14
TMEM88BA6NKF7 AP003327.1-201ENST00000529684 127 ntBASIC1.7□□□□□ -2.14
TMEM88BA6NKF7 MIR4804-201ENST00000581683 73 ntBASIC1.7□□□□□ -2.14
TMEM88BA6NKF7 Y_RNA.56-201ENST00000362798 112 ntBASIC1.69□□□□□ -2.14
TMEM88BA6NKF7 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
TMEM88BA6NKF7 AC015818.7-201ENST00000428754 109 ntBASIC1.69□□□□□ -2.14
TMEM88BA6NKF7 AC087499.7-201ENST00000441958 109 ntBASIC1.69□□□□□ -2.14
TMEM88BA6NKF7 AC013244.2-201ENST00000603396 103 ntBASIC1.69□□□□□ -2.14
TMEM88BA6NKF7 Y_RNA.42-201ENST00000362660 108 ntBASIC1.68□□□□□ -2.14
TMEM88BA6NKF7 SNORD58A-201ENST00000383875 65 ntBASIC1.68□□□□□ -2.14
TMEM88BA6NKF7 MIR942-201ENST00000401111 86 ntBASIC1.68□□□□□ -2.14
TMEM88BA6NKF7 MIR26B-201ENST00000362251 77 ntBASIC1.67□□□□□ -2.14
TMEM88BA6NKF7 MIR181B2-201ENST00000385004 89 ntBASIC1.67□□□□□ -2.14
TMEM88BA6NKF7 MIR1304-201ENST00000408243 91 ntBASIC1.67□□□□□ -2.14
TMEM88BA6NKF7 RNU7-102P-201ENST00000458948 62 ntBASIC1.67□□□□□ -2.14
TMEM88BA6NKF7 U7.7-201ENST00000459276 60 ntBASIC1.67□□□□□ -2.14
TMEM88BA6NKF7 RNA5SP436-201ENST00000516020 115 ntBASIC1.67□□□□□ -2.14
TMEM88BA6NKF7 RNU6-162P-201ENST00000516228 103 ntBASIC1.67□□□□□ -2.14
TMEM88BA6NKF7 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.67□□□□□ -2.14
TMEM88BA6NKF7 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.67□□□□□ -2.14
TMEM88BA6NKF7 Y_RNA.290-201ENST00000364879 114 ntBASIC1.66□□□□□ -2.14
TMEM88BA6NKF7 RNU6-294P-201ENST00000364999 102 ntBASIC1.66□□□□□ -2.14
TMEM88BA6NKF7 MIR488-201ENST00000365739 83 ntBASIC1.66□□□□□ -2.14
TMEM88BA6NKF7 Y_RNA.558-201ENST00000384685 113 ntBASIC1.66□□□□□ -2.14
TMEM88BA6NKF7 SNORD100-201ENST00000408573 76 ntBASIC1.66□□□□□ -2.14
TMEM88BA6NKF7 RN7SL793P-201ENST00000583259 296 ntBASIC1.66□□□□□ -2.14
TMEM88BA6NKF7 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
TMEM88BA6NKF7 RNU7-56P-201ENST00000458744 62 ntBASIC1.65□□□□□ -2.15
TMEM88BA6NKF7 RNU6-844P-201ENST00000517175 102 ntBASIC1.65□□□□□ -2.15
TMEM88BA6NKF7 AC025627.3-201ENST00000582078 182 ntBASIC1.65□□□□□ -2.15
TMEM88BA6NKF7 SNORD114-24-201ENST00000365029 72 ntBASIC1.64□□□□□ -2.15
TMEM88BA6NKF7 RNA5SP363-201ENST00000365072 115 ntBASIC1.64□□□□□ -2.15
TMEM88BA6NKF7 RNU6-243P-201ENST00000391140 107 ntBASIC1.64□□□□□ -2.15
TMEM88BA6NKF7 RNU6-1254P-201ENST00000391266 104 ntBASIC1.64□□□□□ -2.15
TMEM88BA6NKF7 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.64□□□□□ -2.15
TMEM88BA6NKF7 MIR6767-201ENST00000637302 66 ntBASIC1.64□□□□□ -2.15
TMEM88BA6NKF7 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
TMEM88BA6NKF7 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.63□□□□□ -2.15
TMEM88BA6NKF7 RNU1-124P-201ENST00000363861 145 ntBASIC1.63□□□□□ -2.15
TMEM88BA6NKF7 RNY1P4-201ENST00000384595 115 ntBASIC1.63□□□□□ -2.15
TMEM88BA6NKF7 Y_RNA.536-201ENST00000384621 113 ntBASIC1.63□□□□□ -2.15
TMEM88BA6NKF7 MIR618-201ENST00000385287 98 ntBASIC1.63□□□□□ -2.15
TMEM88BA6NKF7 SNORD89-201ENST00000390981 114 ntBASIC1.63□□□□□ -2.15
TMEM88BA6NKF7 AC138907.6-201ENST00000568401 126 ntBASIC1.63□□□□□ -2.15
TMEM88BA6NKF7 AC138869.1-201ENST00000568623 124 ntBASIC1.63□□□□□ -2.15
TMEM88BA6NKF7 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
TMEM88BA6NKF7 RNU6-1134P-201ENST00000365156 101 ntBASIC1.62□□□□□ -2.15
TMEM88BA6NKF7 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.62□□□□□ -2.15
TMEM88BA6NKF7 RNU6-448P-201ENST00000517052 107 ntBASIC1.62□□□□□ -2.15
TMEM88BA6NKF7 RNA5SP404-201ENST00000517118 132 ntBASIC1.62□□□□□ -2.15
TMEM88BA6NKF7 RNU6-369P-201ENST00000362515 102 ntBASIC1.61□□□□□ -2.15
TMEM88BA6NKF7 Y_RNA.174-201ENST00000363781 105 ntBASIC1.61□□□□□ -2.15
TMEM88BA6NKF7 RNU6-535P-201ENST00000384722 107 ntBASIC1.61□□□□□ -2.15
TMEM88BA6NKF7 SNORD63B-201ENST00000411005 70 ntBASIC1.61□□□□□ -2.15
TMEM88BA6NKF7 AL513043.2-201ENST00000573941 143 ntBASIC1.61□□□□□ -2.15
TMEM88BA6NKF7 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.61□□□□□ -2.15
TMEM88BA6NKF7 RNU6-49P-201ENST00000384256 107 ntBASIC1.6□□□□□ -2.15
TMEM88BA6NKF7 AC026421.1-201ENST00000519101 163 ntBASIC1.6□□□□□ -2.15
TMEM88BA6NKF7 MIR3660-201ENST00000584845 100 ntBASIC1.6□□□□□ -2.15
TMEM88BA6NKF7 SNORD116-22-201ENST00000384430 92 ntBASIC1.59□□□□□ -2.15
TMEM88BA6NKF7 MIR520H-201ENST00000385126 88 ntBASIC1.59□□□□□ -2.15
TMEM88BA6NKF7 SNORD105-201ENST00000386910 85 ntBASIC1.59□□□□□ -2.15
TMEM88BA6NKF7 RNU6-997P-201ENST00000384725 107 ntBASIC1.58□□□□□ -2.16
TMEM88BA6NKF7 RNY1P7-201ENST00000384743 110 ntBASIC1.58□□□□□ -2.16
TMEM88BA6NKF7 MIR519A1-201ENST00000385257 85 ntBASIC1.58□□□□□ -2.16
TMEM88BA6NKF7 SNORA40.6-201ENST00000391153 128 ntBASIC1.58□□□□□ -2.16
TMEM88BA6NKF7 AC025521.1-201ENST00000621624 286 ntBASIC1.58□□□□□ -2.16
TMEM88BA6NKF7 MIR516A2-201ENST00000384888 90 ntBASIC1.57□□□□□ -2.16
TMEM88BA6NKF7 MIR516A1-201ENST00000385033 90 ntBASIC1.57□□□□□ -2.16
TMEM88BA6NKF7 MIR216A-201ENST00000385063 110 ntBASIC1.57□□□□□ -2.16
TMEM88BA6NKF7 AC092628.1-201ENST00000436250 252 ntBASIC1.57□□□□□ -2.16
TMEM88BA6NKF7 AC004223.1-201ENST00000479840 271 ntBASIC1.57□□□□□ -2.16
TMEM88BA6NKF7 AC023790.1-201ENST00000482174 347 ntBASIC1.57□□□□□ -2.16
TMEM88BA6NKF7 RNA5SP117-201ENST00000365294 118 ntBASIC1.56□□□□□ -2.16
TMEM88BA6NKF7 RNU6-939P-201ENST00000384634 107 ntBASIC1.56□□□□□ -2.16
TMEM88BA6NKF7 RNU6-519P-201ENST00000410590 108 ntBASIC1.56□□□□□ -2.16
TMEM88BA6NKF7 AC097635.1-201ENST00000450678 155 ntBASIC1.56□□□□□ -2.16
TMEM88BA6NKF7 SNORD124-201ENST00000459577 104 ntBASIC1.56□□□□□ -2.16
TMEM88BA6NKF7 Y_RNA.190-201ENST00000363964 101 ntBASIC1.55□□□□□ -2.16
TMEM88BA6NKF7 RNU6-466P-201ENST00000391224 103 ntBASIC1.55□□□□□ -2.16
TMEM88BA6NKF7 Y_RNA.809-201ENST00000516058 95 ntBASIC1.55□□□□□ -2.16
TMEM88BA6NKF7 AC008608.1-201ENST00000603910 127 ntBASIC1.55□□□□□ -2.16
TMEM88BA6NKF7 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
TMEM88BA6NKF7 RNU6-291P-201ENST00000384720 107 ntBASIC1.54□□□□□ -2.16
TMEM88BA6NKF7 Y_RNA.648-201ENST00000459455 110 ntBASIC1.54□□□□□ -2.16
TMEM88BA6NKF7 TRAJ51-201ENST00000504127 63 ntBASIC1.54□□□□□ -2.16
TMEM88BA6NKF7 RNU6-135P-201ENST00000516769 101 ntBASIC1.54□□□□□ -2.16
TMEM88BA6NKF7 MIR3122-201ENST00000577243 73 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 221.5 ms