Protein–RNA interactions for Protein: A6NCW0

USP17L3, Ubiquitin carboxyl-terminal hydrolase 17-like protein 3, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L3A6NCW0 SNORD12-201ENST00000391002 90 ntBASIC1.93□□□□□ -2.1
USP17L3A6NCW0 MIR1236-201ENST00000408340 102 ntBASIC1.93□□□□□ -2.1
USP17L3A6NCW0 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.93□□□□□ -2.1
USP17L3A6NCW0 RNU7-156P-201ENST00000517214 74 ntBASIC1.93□□□□□ -2.1
USP17L3A6NCW0 MIR4676-201ENST00000583078 72 ntBASIC1.93□□□□□ -2.1
USP17L3A6NCW0 SNORA67.6-201ENST00000391093 99 ntBASIC1.92□□□□□ -2.1
USP17L3A6NCW0 RNU7-85P-201ENST00000458851 63 ntBASIC1.92□□□□□ -2.1
USP17L3A6NCW0 snoU13.11-201ENST00000459219 104 ntBASIC1.92□□□□□ -2.1
USP17L3A6NCW0 AC093729.1-201ENST00000513074 128 ntBASIC1.92□□□□□ -2.1
USP17L3A6NCW0 RNU6-65P-201ENST00000516332 98 ntBASIC1.92□□□□□ -2.1
USP17L3A6NCW0 Y_RNA.697-201ENST00000516776 113 ntBASIC1.92□□□□□ -2.1
USP17L3A6NCW0 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.92□□□□□ -2.1
USP17L3A6NCW0 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
USP17L3A6NCW0 RNU4-32P-201ENST00000363404 141 ntBASIC1.91□□□□□ -2.1
USP17L3A6NCW0 MIR938-201ENST00000401216 83 ntBASIC1.91□□□□□ -2.1
USP17L3A6NCW0 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
USP17L3A6NCW0 RNU6-392P-201ENST00000364926 101 ntBASIC1.9□□□□□ -2.11
USP17L3A6NCW0 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
USP17L3A6NCW0 MIR222-201ENST00000384992 110 ntBASIC1.9□□□□□ -2.11
USP17L3A6NCW0 MIR517C-201ENST00000385103 95 ntBASIC1.9□□□□□ -2.11
USP17L3A6NCW0 MIR519A1-201ENST00000385257 85 ntBASIC1.9□□□□□ -2.11
USP17L3A6NCW0 MIR1255A-201ENST00000408338 113 ntBASIC1.9□□□□□ -2.11
USP17L3A6NCW0 AC067940.1-201ENST00000458411 300 ntBASIC1.9□□□□□ -2.11
USP17L3A6NCW0 RNU7-106P-201ENST00000459514 67 ntBASIC1.9□□□□□ -2.11
USP17L3A6NCW0 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.9□□□□□ -2.11
USP17L3A6NCW0 TRAJ51-201ENST00000504127 63 ntBASIC1.9□□□□□ -2.11
USP17L3A6NCW0 MIR4536-1-201ENST00000583537 88 ntBASIC1.9□□□□□ -2.11
USP17L3A6NCW0 MIR4448-201ENST00000584360 86 ntBASIC1.9□□□□□ -2.11
USP17L3A6NCW0 SNORD92-201ENST00000585078 85 ntBASIC1.9□□□□□ -2.11
USP17L3A6NCW0 SNORA7.1-201ENST00000363750 139 ntBASIC1.89□□□□□ -2.11
USP17L3A6NCW0 Y_RNA.283-201ENST00000364798 112 ntBASIC1.89□□□□□ -2.11
USP17L3A6NCW0 RNU6-524P-201ENST00000384270 107 ntBASIC1.89□□□□□ -2.11
USP17L3A6NCW0 Y_RNA.508-201ENST00000384502 114 ntBASIC1.89□□□□□ -2.11
USP17L3A6NCW0 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.89□□□□□ -2.11
USP17L3A6NCW0 AC027335.2-201ENST00000624030 375 ntBASIC1.89□□□□□ -2.11
USP17L3A6NCW0 Y_RNA.355-201ENST00000365462 98 ntBASIC1.88□□□□□ -2.11
USP17L3A6NCW0 MIR1323-201ENST00000408090 73 ntBASIC1.88□□□□□ -2.11
USP17L3A6NCW0 AC092628.1-201ENST00000436250 252 ntBASIC1.88□□□□□ -2.11
USP17L3A6NCW0 RNU6-977P-201ENST00000516411 103 ntBASIC1.88□□□□□ -2.11
USP17L3A6NCW0 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.88□□□□□ -2.11
USP17L3A6NCW0 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
USP17L3A6NCW0 RNU6-787P-201ENST00000384032 107 ntBASIC1.87□□□□□ -2.11
USP17L3A6NCW0 MIR100-201ENST00000385259 80 ntBASIC1.87□□□□□ -2.11
USP17L3A6NCW0 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
USP17L3A6NCW0 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.87□□□□□ -2.11
USP17L3A6NCW0 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.87□□□□□ -2.11
USP17L3A6NCW0 RNA5SP225-201ENST00000410874 135 ntBASIC1.87□□□□□ -2.11
USP17L3A6NCW0 RNU7-195P-201ENST00000458793 62 ntBASIC1.87□□□□□ -2.11
USP17L3A6NCW0 ZNF209P-201ENST00000593450 2304 ntBASIC1.87□□□□□ -2.11
USP17L3A6NCW0 MIR1-1-201ENST00000362147 71 ntBASIC1.86□□□□□ -2.11
USP17L3A6NCW0 RNU6-811P-201ENST00000384069 107 ntBASIC1.86□□□□□ -2.11
USP17L3A6NCW0 Y_RNA.809-201ENST00000516058 95 ntBASIC1.86□□□□□ -2.11
USP17L3A6NCW0 SNORA31.24-201ENST00000517232 57 ntBASIC1.86□□□□□ -2.11
USP17L3A6NCW0 MIR4421-201ENST00000578133 69 ntBASIC1.86□□□□□ -2.11
USP17L3A6NCW0 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.86□□□□□ -2.11
USP17L3A6NCW0 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
USP17L3A6NCW0 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
USP17L3A6NCW0 AC097635.1-201ENST00000450678 155 ntBASIC1.85□□□□□ -2.11
USP17L3A6NCW0 RNU1-92P-201ENST00000517017 135 ntBASIC1.85□□□□□ -2.11
USP17L3A6NCW0 RNU6-448P-201ENST00000517052 107 ntBASIC1.85□□□□□ -2.11
USP17L3A6NCW0 AC138907.6-201ENST00000568401 126 ntBASIC1.85□□□□□ -2.11
USP17L3A6NCW0 AC138869.1-201ENST00000568623 124 ntBASIC1.85□□□□□ -2.11
USP17L3A6NCW0 MIR4804-201ENST00000581683 73 ntBASIC1.85□□□□□ -2.11
USP17L3A6NCW0 RNU6-1260P-201ENST00000362944 107 ntBASIC1.84□□□□□ -2.11
USP17L3A6NCW0 Y_RNA.118-201ENST00000363300 101 ntBASIC1.84□□□□□ -2.11
USP17L3A6NCW0 MIR548U-201ENST00000390728 81 ntBASIC1.84□□□□□ -2.11
USP17L3A6NCW0 MIR1276-201ENST00000408707 83 ntBASIC1.84□□□□□ -2.11
USP17L3A6NCW0 RNU7-102P-201ENST00000458948 62 ntBASIC1.84□□□□□ -2.11
USP17L3A6NCW0 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.84□□□□□ -2.11
USP17L3A6NCW0 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
USP17L3A6NCW0 RNU6-369P-201ENST00000362515 102 ntBASIC1.83□□□□□ -2.12
USP17L3A6NCW0 Y_RNA.313-201ENST00000365095 103 ntBASIC1.83□□□□□ -2.12
USP17L3A6NCW0 RNU6-652P-201ENST00000365488 107 ntBASIC1.83□□□□□ -2.12
USP17L3A6NCW0 RNU6-535P-201ENST00000384722 107 ntBASIC1.83□□□□□ -2.12
USP17L3A6NCW0 RNU1-119P-201ENST00000391122 165 ntBASIC1.83□□□□□ -2.12
USP17L3A6NCW0 AC140658.3-201ENST00000567603 271 ntBASIC1.83□□□□□ -2.12
USP17L3A6NCW0 uc_338.20-201ENST00000621563 178 ntBASIC1.83□□□□□ -2.12
USP17L3A6NCW0 RNU6-957P-201ENST00000363652 99 ntBASIC1.82□□□□□ -2.12
USP17L3A6NCW0 Y_RNA.316-201ENST00000365118 111 ntBASIC1.82□□□□□ -2.12
USP17L3A6NCW0 SNORA25-201ENST00000384384 134 ntBASIC1.82□□□□□ -2.12
USP17L3A6NCW0 RNU6-279P-201ENST00000391297 101 ntBASIC1.82□□□□□ -2.12
USP17L3A6NCW0 RNU6-75P-201ENST00000515944 104 ntBASIC1.82□□□□□ -2.12
USP17L3A6NCW0 RNU6-291P-201ENST00000384720 107 ntBASIC1.81□□□□□ -2.12
USP17L3A6NCW0 MIR520F-201ENST00000384824 87 ntBASIC1.81□□□□□ -2.12
USP17L3A6NCW0 MIR518E-201ENST00000385252 88 ntBASIC1.81□□□□□ -2.12
USP17L3A6NCW0 MIR1827-201ENST00000408549 66 ntBASIC1.81□□□□□ -2.12
USP17L3A6NCW0 RNU7-153P-201ENST00000516455 62 ntBASIC1.81□□□□□ -2.12
USP17L3A6NCW0 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.81□□□□□ -2.12
USP17L3A6NCW0 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
USP17L3A6NCW0 AL354695.1-201ENST00000427935 228 ntBASIC1.8□□□□□ -2.12
USP17L3A6NCW0 AC002429.1-201ENST00000437672 148 ntBASIC1.8□□□□□ -2.12
USP17L3A6NCW0 SNORA25.13-201ENST00000516395 103 ntBASIC1.8□□□□□ -2.12
USP17L3A6NCW0 RNA5SP395-201ENST00000516567 118 ntBASIC1.8□□□□□ -2.12
USP17L3A6NCW0 MIR4796-201ENST00000580742 81 ntBASIC1.8□□□□□ -2.12
USP17L3A6NCW0 AC104996.3-201ENST00000590718 94 ntBASIC1.8□□□□□ -2.12
USP17L3A6NCW0 MIR6504-201ENST00000613520 61 ntBASIC1.8□□□□□ -2.12
USP17L3A6NCW0 AL157834.3-201ENST00000615543 103 ntBASIC1.8□□□□□ -2.12
USP17L3A6NCW0 MIR599-201ENST00000385069 95 ntBASIC1.79□□□□□ -2.12
USP17L3A6NCW0 RNU7-56P-201ENST00000458744 62 ntBASIC1.79□□□□□ -2.12
USP17L3A6NCW0 TRDV1-202ENST00000621643 102 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 269.5 ms