Protein–RNA interactions for Protein: Q9Y5I1

PCDHA11, Protocadherin alpha-11, humanhuman

Predictions only

Length 949 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11Q9Y5I1 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.83□□□□□ -2.12
PCDHA11Q9Y5I1 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
PCDHA11Q9Y5I1 MIR103A2-201ENST00000362154 78 ntBASIC1.82□□□□□ -2.12
PCDHA11Q9Y5I1 RNU6-1065P-201ENST00000384513 106 ntBASIC1.82□□□□□ -2.12
PCDHA11Q9Y5I1 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.82□□□□□ -2.12
PCDHA11Q9Y5I1 MIR8066-201ENST00000617280 78 ntBASIC1.82□□□□□ -2.12
PCDHA11Q9Y5I1 Y_RNA.119-201ENST00000363301 96 ntBASIC1.81□□□□□ -2.12
PCDHA11Q9Y5I1 SNORD115-27-201ENST00000364430 82 ntBASIC1.81□□□□□ -2.12
PCDHA11Q9Y5I1 SNORD48-201ENST00000364953 64 ntBASIC1.81□□□□□ -2.12
PCDHA11Q9Y5I1 Y_RNA.313-201ENST00000365095 103 ntBASIC1.81□□□□□ -2.12
PCDHA11Q9Y5I1 RNU6-571P-201ENST00000384128 107 ntBASIC1.81□□□□□ -2.12
PCDHA11Q9Y5I1 RNU6-279P-201ENST00000391297 101 ntBASIC1.81□□□□□ -2.12
PCDHA11Q9Y5I1 Y_RNA.607-201ENST00000410597 98 ntBASIC1.81□□□□□ -2.12
PCDHA11Q9Y5I1 RNU6-850P-201ENST00000516934 103 ntBASIC1.81□□□□□ -2.12
PCDHA11Q9Y5I1 AL645939.4-201ENST00000604495 135 ntBASIC1.81□□□□□ -2.12
PCDHA11Q9Y5I1 uc_338.6-201ENST00000613544 171 ntBASIC1.81□□□□□ -2.12
PCDHA11Q9Y5I1 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.81□□□□□ -2.12
PCDHA11Q9Y5I1 Y_RNA.57-201ENST00000362806 113 ntBASIC1.8□□□□□ -2.12
PCDHA11Q9Y5I1 RNU6-654P-201ENST00000364373 107 ntBASIC1.8□□□□□ -2.12
PCDHA11Q9Y5I1 RNU4-83P-201ENST00000410863 133 ntBASIC1.8□□□□□ -2.12
PCDHA11Q9Y5I1 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.8□□□□□ -2.12
PCDHA11Q9Y5I1 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.8□□□□□ -2.12
PCDHA11Q9Y5I1 SNORA7.1-201ENST00000363750 139 ntBASIC1.79□□□□□ -2.12
PCDHA11Q9Y5I1 RNU1-42P-201ENST00000364033 160 ntBASIC1.79□□□□□ -2.12
PCDHA11Q9Y5I1 RNU6-580P-201ENST00000365159 107 ntBASIC1.79□□□□□ -2.12
PCDHA11Q9Y5I1 RNU6-42P-201ENST00000384165 107 ntBASIC1.79□□□□□ -2.12
PCDHA11Q9Y5I1 Y_RNA.540-201ENST00000384638 111 ntBASIC1.79□□□□□ -2.12
PCDHA11Q9Y5I1 RNU6-519P-201ENST00000410590 108 ntBASIC1.79□□□□□ -2.12
PCDHA11Q9Y5I1 AC019176.1-201ENST00000518519 225 ntBASIC1.79□□□□□ -2.12
PCDHA11Q9Y5I1 MIR3937-201ENST00000580135 106 ntBASIC1.79□□□□□ -2.12
PCDHA11Q9Y5I1 MIR4452-201ENST00000583004 71 ntBASIC1.79□□□□□ -2.12
PCDHA11Q9Y5I1 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
PCDHA11Q9Y5I1 MIR519C-201ENST00000385053 87 ntBASIC1.78□□□□□ -2.12
PCDHA11Q9Y5I1 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.78□□□□□ -2.12
PCDHA11Q9Y5I1 BX276092.1-201ENST00000427368 251 ntBASIC1.78□□□□□ -2.12
PCDHA11Q9Y5I1 AC087499.7-201ENST00000441958 109 ntBASIC1.78□□□□□ -2.12
PCDHA11Q9Y5I1 RNU1-123P-201ENST00000458950 160 ntBASIC1.78□□□□□ -2.12
PCDHA11Q9Y5I1 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.78□□□□□ -2.12
PCDHA11Q9Y5I1 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.77□□□□□ -2.13
PCDHA11Q9Y5I1 RNA5SP95-201ENST00000410319 137 ntBASIC1.77□□□□□ -2.13
PCDHA11Q9Y5I1 MIR18B-201ENST00000454574 71 ntBASIC1.77□□□□□ -2.13
PCDHA11Q9Y5I1 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.77□□□□□ -2.13
PCDHA11Q9Y5I1 MIR3664-201ENST00000579074 99 ntBASIC1.77□□□□□ -2.13
PCDHA11Q9Y5I1 RNU6-524P-201ENST00000384270 107 ntBASIC1.76□□□□□ -2.13
PCDHA11Q9Y5I1 RNU6-857P-201ENST00000515893 110 ntBASIC1.76□□□□□ -2.13
PCDHA11Q9Y5I1 RNU6-165P-201ENST00000517170 99 ntBASIC1.76□□□□□ -2.13
PCDHA11Q9Y5I1 AC012493.3-201ENST00000604494 112 ntBASIC1.76□□□□□ -2.13
PCDHA11Q9Y5I1 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.75□□□□□ -2.13
PCDHA11Q9Y5I1 Y_RNA.244-201ENST00000364484 109 ntBASIC1.75□□□□□ -2.13
PCDHA11Q9Y5I1 RNU6-652P-201ENST00000365488 107 ntBASIC1.75□□□□□ -2.13
PCDHA11Q9Y5I1 SNORA67.6-201ENST00000391093 99 ntBASIC1.75□□□□□ -2.13
PCDHA11Q9Y5I1 AC093729.1-201ENST00000513074 128 ntBASIC1.75□□□□□ -2.13
PCDHA11Q9Y5I1 RNA5SP102-201ENST00000516865 106 ntBASIC1.75□□□□□ -2.13
PCDHA11Q9Y5I1 RNU6-902P-201ENST00000517212 91 ntBASIC1.75□□□□□ -2.13
PCDHA11Q9Y5I1 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.75□□□□□ -2.13
PCDHA11Q9Y5I1 MIR4491-201ENST00000581087 68 ntBASIC1.75□□□□□ -2.13
PCDHA11Q9Y5I1 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.75□□□□□ -2.13
PCDHA11Q9Y5I1 Y_RNA.316-201ENST00000365118 111 ntBASIC1.74□□□□□ -2.13
PCDHA11Q9Y5I1 Y_RNA.588-201ENST00000391254 102 ntBASIC1.74□□□□□ -2.13
PCDHA11Q9Y5I1 SNORD4B-201ENST00000459083 72 ntBASIC1.74□□□□□ -2.13
PCDHA11Q9Y5I1 Y_RNA.648-201ENST00000459455 110 ntBASIC1.74□□□□□ -2.13
PCDHA11Q9Y5I1 RNA5SP220-201ENST00000516298 104 ntBASIC1.74□□□□□ -2.13
PCDHA11Q9Y5I1 MIR4421-201ENST00000578133 69 ntBASIC1.74□□□□□ -2.13
PCDHA11Q9Y5I1 AL078603.1-201ENST00000603824 313 ntBASIC1.74□□□□□ -2.13
PCDHA11Q9Y5I1 RMST_2.1-201ENST00000617263 136 ntBASIC1.74□□□□□ -2.13
PCDHA11Q9Y5I1 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.74□□□□□ -2.13
PCDHA11Q9Y5I1 ZNF209P-201ENST00000593450 2304 ntBASIC1.73□□□□□ -2.13
PCDHA11Q9Y5I1 RNU4-58P-201ENST00000363192 141 ntBASIC1.73□□□□□ -2.13
PCDHA11Q9Y5I1 SNORD115-37-201ENST00000363768 82 ntBASIC1.73□□□□□ -2.13
PCDHA11Q9Y5I1 RNU1-36P-201ENST00000365130 165 ntBASIC1.73□□□□□ -2.13
PCDHA11Q9Y5I1 RNU6-53P-201ENST00000365367 106 ntBASIC1.73□□□□□ -2.13
PCDHA11Q9Y5I1 RNU6-24P-201ENST00000384440 107 ntBASIC1.73□□□□□ -2.13
PCDHA11Q9Y5I1 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
PCDHA11Q9Y5I1 SNORD93-201ENST00000408813 74 ntBASIC1.73□□□□□ -2.13
PCDHA11Q9Y5I1 AL512310.8-201ENST00000550183 120 ntBASIC1.73□□□□□ -2.13
PCDHA11Q9Y5I1 MIR3122-201ENST00000577243 73 ntBASIC1.73□□□□□ -2.13
PCDHA11Q9Y5I1 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.72□□□□□ -2.13
PCDHA11Q9Y5I1 MIR517C-201ENST00000385103 95 ntBASIC1.72□□□□□ -2.13
PCDHA11Q9Y5I1 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.72□□□□□ -2.13
PCDHA11Q9Y5I1 RNU7-85P-201ENST00000458851 63 ntBASIC1.72□□□□□ -2.13
PCDHA11Q9Y5I1 RNU6-531P-201ENST00000516694 104 ntBASIC1.72□□□□□ -2.13
PCDHA11Q9Y5I1 SNORA25.16-201ENST00000516741 121 ntBASIC1.72□□□□□ -2.13
PCDHA11Q9Y5I1 RNU1-92P-201ENST00000517017 135 ntBASIC1.72□□□□□ -2.13
PCDHA11Q9Y5I1 AL157834.3-201ENST00000615543 103 ntBASIC1.72□□□□□ -2.13
PCDHA11Q9Y5I1 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
PCDHA11Q9Y5I1 MIR1236-201ENST00000408340 102 ntBASIC1.71□□□□□ -2.14
PCDHA11Q9Y5I1 RNU6-1054P-201ENST00000411293 104 ntBASIC1.71□□□□□ -2.14
PCDHA11Q9Y5I1 RPS27P16-201ENST00000425758 201 ntBASIC1.71□□□□□ -2.14
PCDHA11Q9Y5I1 AC140658.3-201ENST00000567603 271 ntBASIC1.71□□□□□ -2.14
PCDHA11Q9Y5I1 SNORA72.6-201ENST00000384520 129 ntBASIC1.7□□□□□ -2.14
PCDHA11Q9Y5I1 MIR516A2-201ENST00000384888 90 ntBASIC1.7□□□□□ -2.14
PCDHA11Q9Y5I1 MIR516A1-201ENST00000385033 90 ntBASIC1.7□□□□□ -2.14
PCDHA11Q9Y5I1 RNA5SP480-201ENST00000516840 109 ntBASIC1.7□□□□□ -2.14
PCDHA11Q9Y5I1 MIR4285-201ENST00000581001 85 ntBASIC1.7□□□□□ -2.14
PCDHA11Q9Y5I1 SNORD36A-201ENST00000362874 73 ntBASIC1.69□□□□□ -2.14
PCDHA11Q9Y5I1 RNU6-1254P-201ENST00000391266 104 ntBASIC1.69□□□□□ -2.14
PCDHA11Q9Y5I1 RNU6-1194P-201ENST00000516208 104 ntBASIC1.69□□□□□ -2.14
PCDHA11Q9Y5I1 SNORA31.24-201ENST00000517232 57 ntBASIC1.69□□□□□ -2.14
PCDHA11Q9Y5I1 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.69□□□□□ -2.14
PCDHA11Q9Y5I1 MIR6734-201ENST00000621166 68 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 169.3 ms