Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 RNU7-161P-201ENST00000517289 62 ntBASIC0.25□□□□□ -2.37
CHMP1AQ9HD42 MIR1255B1-201ENST00000636325 63 ntBASIC0.25□□□□□ -2.37
CHMP1AQ9HD42 SNORA25.9-201ENST00000365087 128 ntBASIC0.24□□□□□ -2.37
CHMP1AQ9HD42 RNU6-1126P-201ENST00000384002 107 ntBASIC0.24□□□□□ -2.37
CHMP1AQ9HD42 Y_RNA.506-201ENST00000384494 102 ntBASIC0.24□□□□□ -2.37
CHMP1AQ9HD42 Y_RNA.528-201ENST00000384575 108 ntBASIC0.24□□□□□ -2.37
CHMP1AQ9HD42 MIR635-201ENST00000384830 98 ntBASIC0.24□□□□□ -2.37
CHMP1AQ9HD42 RNU6-346P-201ENST00000516288 111 ntBASIC0.24□□□□□ -2.37
CHMP1AQ9HD42 RNU6-521P-201ENST00000516663 105 ntBASIC0.24□□□□□ -2.37
CHMP1AQ9HD42 RNU7-10P-201ENST00000607194 63 ntBASIC0.24□□□□□ -2.37
CHMP1AQ9HD42 MIR8070-201ENST00000616510 88 ntBASIC0.24□□□□□ -2.37
CHMP1AQ9HD42 RNU6-235P-201ENST00000362644 107 ntBASIC0.23□□□□□ -2.37
CHMP1AQ9HD42 RNU6-716P-201ENST00000365621 103 ntBASIC0.23□□□□□ -2.37
CHMP1AQ9HD42 AC073261.1-201ENST00000429409 121 ntBASIC0.23□□□□□ -2.37
CHMP1AQ9HD42 RNA5SP403-201ENST00000363598 108 ntBASIC0.22□□□□□ -2.37
CHMP1AQ9HD42 RNU6-726P-201ENST00000364680 107 ntBASIC0.22□□□□□ -2.37
CHMP1AQ9HD42 Y_RNA.360-201ENST00000365512 102 ntBASIC0.22□□□□□ -2.37
CHMP1AQ9HD42 Y_RNA.568-201ENST00000384742 113 ntBASIC0.22□□□□□ -2.37
CHMP1AQ9HD42 MIR759-201ENST00000390224 91 ntBASIC0.22□□□□□ -2.37
CHMP1AQ9HD42 MIR548I2-201ENST00000408348 149 ntBASIC0.22□□□□□ -2.37
CHMP1AQ9HD42 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.22□□□□□ -2.37
CHMP1AQ9HD42 AC069113.3-201ENST00000521019 150 ntBASIC0.22□□□□□ -2.37
CHMP1AQ9HD42 RNU6-1099P-201ENST00000363533 107 ntBASIC0.21□□□□□ -2.38
CHMP1AQ9HD42 RNY1P5-201ENST00000383890 115 ntBASIC0.21□□□□□ -2.38
CHMP1AQ9HD42 MIR548D2-201ENST00000384955 97 ntBASIC0.21□□□□□ -2.38
CHMP1AQ9HD42 RNU6-257P-201ENST00000410238 98 ntBASIC0.21□□□□□ -2.38
CHMP1AQ9HD42 RNA5SP247-201ENST00000411181 105 ntBASIC0.21□□□□□ -2.38
CHMP1AQ9HD42 MIR4752-201ENST00000579672 72 ntBASIC0.21□□□□□ -2.38
CHMP1AQ9HD42 MIR5093-201ENST00000583199 100 ntBASIC0.21□□□□□ -2.38
CHMP1AQ9HD42 MIR6513-201ENST00000621188 64 ntBASIC0.21□□□□□ -2.38
CHMP1AQ9HD42 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.21□□□□□ -2.38
CHMP1AQ9HD42 SNORD58C-201ENST00000365223 64 ntBASIC0.2□□□□□ -2.38
CHMP1AQ9HD42 Y_RNA.423-201ENST00000384057 113 ntBASIC0.2□□□□□ -2.38
CHMP1AQ9HD42 MIR599-201ENST00000385069 95 ntBASIC0.2□□□□□ -2.38
CHMP1AQ9HD42 RNU6-907P-201ENST00000390924 102 ntBASIC0.2□□□□□ -2.38
CHMP1AQ9HD42 RNU7-104P-201ENST00000459398 79 ntBASIC0.2□□□□□ -2.38
CHMP1AQ9HD42 RNU1-29P-201ENST00000606574 126 ntBASIC0.2□□□□□ -2.38
CHMP1AQ9HD42 Y_RNA.164-201ENST00000363709 102 ntBASIC0.19□□□□□ -2.38
CHMP1AQ9HD42 Y_RNA.221-201ENST00000364248 96 ntBASIC0.19□□□□□ -2.38
CHMP1AQ9HD42 Y_RNA.343-201ENST00000365354 112 ntBASIC0.19□□□□□ -2.38
CHMP1AQ9HD42 VTRNA1-3-201ENST00000365645 89 ntBASIC0.19□□□□□ -2.38
CHMP1AQ9HD42 RNU6-571P-201ENST00000384128 107 ntBASIC0.19□□□□□ -2.38
CHMP1AQ9HD42 MIR519A1-201ENST00000385257 85 ntBASIC0.19□□□□□ -2.38
CHMP1AQ9HD42 SNORA40-201ENST00000388090 126 ntBASIC0.19□□□□□ -2.38
CHMP1AQ9HD42 MIR548I1-201ENST00000408810 149 ntBASIC0.19□□□□□ -2.38
CHMP1AQ9HD42 SNORD63B-201ENST00000411005 70 ntBASIC0.19□□□□□ -2.38
CHMP1AQ9HD42 AC097635.1-201ENST00000450678 155 ntBASIC0.19□□□□□ -2.38
CHMP1AQ9HD42 AC025166.1-201ENST00000612411 163 ntBASIC0.19□□□□□ -2.38
CHMP1AQ9HD42 RNU6-170P-201ENST00000362832 104 ntBASIC0.18□□□□□ -2.38
CHMP1AQ9HD42 RNU6-1061P-201ENST00000516530 99 ntBASIC0.18□□□□□ -2.38
CHMP1AQ9HD42 MIR3668-201ENST00000582138 75 ntBASIC0.18□□□□□ -2.38
CHMP1AQ9HD42 AL078603.1-201ENST00000603824 313 ntBASIC0.18□□□□□ -2.38
CHMP1AQ9HD42 Y_RNA.4-201ENST00000362333 112 ntBASIC0.17□□□□□ -2.38
CHMP1AQ9HD42 Y_RNA.344-201ENST00000365381 112 ntBASIC0.17□□□□□ -2.38
CHMP1AQ9HD42 SNORA7.5-201ENST00000410672 110 ntBASIC0.17□□□□□ -2.38
CHMP1AQ9HD42 RNU7-195P-201ENST00000458793 62 ntBASIC0.17□□□□□ -2.38
CHMP1AQ9HD42 RNU7-106P-201ENST00000459514 67 ntBASIC0.17□□□□□ -2.38
CHMP1AQ9HD42 RNU6-850P-201ENST00000516934 103 ntBASIC0.17□□□□□ -2.38
CHMP1AQ9HD42 RNU6-1223P-201ENST00000517124 104 ntBASIC0.17□□□□□ -2.38
CHMP1AQ9HD42 AL162376.1-201ENST00000624117 175 ntBASIC0.17□□□□□ -2.38
CHMP1AQ9HD42 AC067863.3-201ENST00000624172 122 ntBASIC0.17□□□□□ -2.38
CHMP1AQ9HD42 MIR4315-1-201ENST00000636800 73 ntBASIC0.17□□□□□ -2.38
CHMP1AQ9HD42 MIR4315-2-201ENST00000640925 73 ntBASIC0.17□□□□□ -2.38
CHMP1AQ9HD42 MTND5P18-201ENST00000445624 1801 ntBASIC0.17□□□□□ -2.38
CHMP1AQ9HD42 Y_RNA.224-201ENST00000364308 111 ntBASIC0.16□□□□□ -2.38
CHMP1AQ9HD42 RNU4-67P-201ENST00000364569 141 ntBASIC0.16□□□□□ -2.38
CHMP1AQ9HD42 MIR548L-201ENST00000408303 86 ntBASIC0.16□□□□□ -2.38
CHMP1AQ9HD42 Y_RNA.630-201ENST00000411370 108 ntBASIC0.16□□□□□ -2.38
CHMP1AQ9HD42 AL353813.1-201ENST00000440700 253 ntBASIC0.16□□□□□ -2.38
CHMP1AQ9HD42 RNU6-848P-201ENST00000515948 107 ntBASIC0.16□□□□□ -2.38
CHMP1AQ9HD42 Y_RNA.809-201ENST00000516058 95 ntBASIC0.16□□□□□ -2.38
CHMP1AQ9HD42 RNU6-617P-201ENST00000516147 107 ntBASIC0.16□□□□□ -2.38
CHMP1AQ9HD42 RNU6-473P-201ENST00000516164 107 ntBASIC0.16□□□□□ -2.38
CHMP1AQ9HD42 RNU6-1049P-201ENST00000516414 107 ntBASIC0.16□□□□□ -2.38
CHMP1AQ9HD42 RNU6-363P-201ENST00000362895 105 ntBASIC0.15□□□□□ -2.39
CHMP1AQ9HD42 RNU6-209P-201ENST00000384118 107 ntBASIC0.15□□□□□ -2.39
CHMP1AQ9HD42 SNORD41.1-201ENST00000391000 69 ntBASIC0.15□□□□□ -2.39
CHMP1AQ9HD42 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.15□□□□□ -2.39
CHMP1AQ9HD42 RNU6-1232P-201ENST00000516299 86 ntBASIC0.15□□□□□ -2.39
CHMP1AQ9HD42 RNU6-1006P-201ENST00000516998 103 ntBASIC0.15□□□□□ -2.39
CHMP1AQ9HD42 MIR4711-201ENST00000578274 70 ntBASIC0.15□□□□□ -2.39
CHMP1AQ9HD42 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.15□□□□□ -2.39
CHMP1AQ9HD42 SNORA9.1-201ENST00000362412 131 ntBASIC0.14□□□□□ -2.39
CHMP1AQ9HD42 Y_RNA.35-201ENST00000362601 101 ntBASIC0.14□□□□□ -2.39
CHMP1AQ9HD42 Y_RNA.116-201ENST00000363292 103 ntBASIC0.14□□□□□ -2.39
CHMP1AQ9HD42 RNY4P6-201ENST00000363667 96 ntBASIC0.14□□□□□ -2.39
CHMP1AQ9HD42 MIR760-201ENST00000390220 80 ntBASIC0.14□□□□□ -2.39
CHMP1AQ9HD42 RNU6-1211P-201ENST00000459179 105 ntBASIC0.14□□□□□ -2.39
CHMP1AQ9HD42 RNU6-772P-201ENST00000516042 105 ntBASIC0.14□□□□□ -2.39
CHMP1AQ9HD42 RNU6-1313P-201ENST00000362622 102 ntBASIC0.13□□□□□ -2.39
CHMP1AQ9HD42 RNU6-1260P-201ENST00000362944 107 ntBASIC0.13□□□□□ -2.39
CHMP1AQ9HD42 Y_RNA.342-201ENST00000365352 113 ntBASIC0.13□□□□□ -2.39
CHMP1AQ9HD42 SNORA2A-201ENST00000383885 135 ntBASIC0.13□□□□□ -2.39
CHMP1AQ9HD42 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.13□□□□□ -2.39
CHMP1AQ9HD42 RNU6-269P-201ENST00000391077 97 ntBASIC0.13□□□□□ -2.39
CHMP1AQ9HD42 Y_RNA.586-201ENST00000391146 98 ntBASIC0.13□□□□□ -2.39
CHMP1AQ9HD42 MIR936-201ENST00000401264 98 ntBASIC0.13□□□□□ -2.39
CHMP1AQ9HD42 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.13□□□□□ -2.39
CHMP1AQ9HD42 SNORA70.25-201ENST00000612741 95 ntBASIC0.13□□□□□ -2.39
CHMP1AQ9HD42 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.13□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 269.5 ms