Protein–RNA interactions for Protein: Q9BQT9

CLSTN3, Calsyntenin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3Q9BQT9 AL109933.3-201ENST00000619095 188 ntBASIC0.68□□□□□ -2.3
CLSTN3Q9BQT9 Y_RNA.174-201ENST00000363781 105 ntBASIC0.67□□□□□ -2.3
CLSTN3Q9BQT9 SNORD116-14-201ENST00000383894 92 ntBASIC0.67□□□□□ -2.3
CLSTN3Q9BQT9 SNORD116-17-201ENST00000383929 92 ntBASIC0.67□□□□□ -2.3
CLSTN3Q9BQT9 SNORA36.2-201ENST00000384004 127 ntBASIC0.67□□□□□ -2.3
CLSTN3Q9BQT9 Y_RNA.448-201ENST00000384185 108 ntBASIC0.67□□□□□ -2.3
CLSTN3Q9BQT9 SNORD116-15-201ENST00000384445 92 ntBASIC0.67□□□□□ -2.3
CLSTN3Q9BQT9 RNU6-959P-201ENST00000384671 107 ntBASIC0.67□□□□□ -2.3
CLSTN3Q9BQT9 SNORD116-19-201ENST00000384729 92 ntBASIC0.67□□□□□ -2.3
CLSTN3Q9BQT9 MIR548D2-201ENST00000384955 97 ntBASIC0.67□□□□□ -2.3
CLSTN3Q9BQT9 RNA5SP193-201ENST00000410353 107 ntBASIC0.67□□□□□ -2.3
CLSTN3Q9BQT9 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.67□□□□□ -2.3
CLSTN3Q9BQT9 RNU7-2P-201ENST00000516096 62 ntBASIC0.67□□□□□ -2.3
CLSTN3Q9BQT9 RNU6-469P-201ENST00000516253 101 ntBASIC0.67□□□□□ -2.3
CLSTN3Q9BQT9 RNU6-531P-201ENST00000516694 104 ntBASIC0.67□□□□□ -2.3
CLSTN3Q9BQT9 RNU6-135P-201ENST00000516769 101 ntBASIC0.67□□□□□ -2.3
CLSTN3Q9BQT9 MIR3914-2-201ENST00000637339 95 ntBASIC0.67□□□□□ -2.3
CLSTN3Q9BQT9 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
CLSTN3Q9BQT9 MIR330-201ENST00000362196 94 ntBASIC0.66□□□□□ -2.3
CLSTN3Q9BQT9 MIR18A-201ENST00000362310 71 ntBASIC0.66□□□□□ -2.3
CLSTN3Q9BQT9 Y_RNA.119-201ENST00000363301 96 ntBASIC0.66□□□□□ -2.3
CLSTN3Q9BQT9 RNY4P6-201ENST00000363667 96 ntBASIC0.66□□□□□ -2.3
CLSTN3Q9BQT9 RNY1P2-201ENST00000364820 117 ntBASIC0.66□□□□□ -2.3
CLSTN3Q9BQT9 SNORD115-35-201ENST00000365122 82 ntBASIC0.66□□□□□ -2.3
CLSTN3Q9BQT9 MIR3910-1-201ENST00000580936 111 ntBASIC0.66□□□□□ -2.3
CLSTN3Q9BQT9 Y_RNA.98-201ENST00000363109 102 ntBASIC0.65□□□□□ -2.31
CLSTN3Q9BQT9 RNA5SP499-201ENST00000363982 119 ntBASIC0.65□□□□□ -2.31
CLSTN3Q9BQT9 RNU7-48P-201ENST00000458875 63 ntBASIC0.65□□□□□ -2.31
CLSTN3Q9BQT9 Y_RNA.697-201ENST00000516776 113 ntBASIC0.65□□□□□ -2.31
CLSTN3Q9BQT9 AC018659.1-201ENST00000551083 169 ntBASIC0.65□□□□□ -2.31
CLSTN3Q9BQT9 uc_338.16-201ENST00000621804 95 ntBASIC0.65□□□□□ -2.31
CLSTN3Q9BQT9 MIR1255B1-201ENST00000636325 63 ntBASIC0.65□□□□□ -2.31
CLSTN3Q9BQT9 RNA5SP257-201ENST00000363023 116 ntBASIC0.64□□□□□ -2.31
CLSTN3Q9BQT9 Y_RNA.127-201ENST00000363386 109 ntBASIC0.64□□□□□ -2.31
CLSTN3Q9BQT9 Y_RNA.258-201ENST00000364613 105 ntBASIC0.64□□□□□ -2.31
CLSTN3Q9BQT9 Y_RNA.344-201ENST00000365381 112 ntBASIC0.64□□□□□ -2.31
CLSTN3Q9BQT9 MIR140-201ENST00000385282 100 ntBASIC0.64□□□□□ -2.31
CLSTN3Q9BQT9 RNU6-733P-201ENST00000410759 104 ntBASIC0.64□□□□□ -2.31
CLSTN3Q9BQT9 RNU6-1333P-201ENST00000516162 93 ntBASIC0.64□□□□□ -2.31
CLSTN3Q9BQT9 MTND5P34-201ENST00000568888 325 ntBASIC0.64□□□□□ -2.31
CLSTN3Q9BQT9 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.63□□□□□ -2.31
CLSTN3Q9BQT9 MIR101-2-201ENST00000362195 79 ntBASIC0.63□□□□□ -2.31
CLSTN3Q9BQT9 Y_RNA.328-201ENST00000365208 113 ntBASIC0.63□□□□□ -2.31
CLSTN3Q9BQT9 Y_RNA.433-201ENST00000384089 102 ntBASIC0.63□□□□□ -2.31
CLSTN3Q9BQT9 Y_RNA.536-201ENST00000384621 113 ntBASIC0.63□□□□□ -2.31
CLSTN3Q9BQT9 AC098934.3-201ENST00000430450 190 ntBASIC0.63□□□□□ -2.31
CLSTN3Q9BQT9 AC092628.1-201ENST00000436250 252 ntBASIC0.63□□□□□ -2.31
CLSTN3Q9BQT9 RNA5SP121-201ENST00000516537 101 ntBASIC0.63□□□□□ -2.31
CLSTN3Q9BQT9 RNU6-521P-201ENST00000516663 105 ntBASIC0.63□□□□□ -2.31
CLSTN3Q9BQT9 MIR376B-201ENST00000614515 100 ntBASIC0.63□□□□□ -2.31
CLSTN3Q9BQT9 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.63□□□□□ -2.31
CLSTN3Q9BQT9 AC243829.3-201ENST00000622177 108 ntBASIC0.63□□□□□ -2.31
CLSTN3Q9BQT9 MIR5087-201ENST00000635826 76 ntBASIC0.63□□□□□ -2.31
CLSTN3Q9BQT9 Y_RNA.261-201ENST00000364631 102 ntBASIC0.62□□□□□ -2.31
CLSTN3Q9BQT9 RNU6-865P-201ENST00000364772 107 ntBASIC0.62□□□□□ -2.31
CLSTN3Q9BQT9 RNU6-429P-201ENST00000384582 108 ntBASIC0.62□□□□□ -2.31
CLSTN3Q9BQT9 RNU6-291P-201ENST00000384720 107 ntBASIC0.62□□□□□ -2.31
CLSTN3Q9BQT9 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.62□□□□□ -2.31
CLSTN3Q9BQT9 Y_RNA.649-201ENST00000459077 103 ntBASIC0.62□□□□□ -2.31
CLSTN3Q9BQT9 RNU7-10P-201ENST00000607194 63 ntBASIC0.62□□□□□ -2.31
CLSTN3Q9BQT9 U6.95-201ENST00000636931 70 ntBASIC0.62□□□□□ -2.31
CLSTN3Q9BQT9 Y_RNA.32-201ENST00000362589 110 ntBASIC0.61□□□□□ -2.31
CLSTN3Q9BQT9 RNU6-716P-201ENST00000365621 103 ntBASIC0.61□□□□□ -2.31
CLSTN3Q9BQT9 RNY1P8-201ENST00000383970 114 ntBASIC0.61□□□□□ -2.31
CLSTN3Q9BQT9 RNU6-535P-201ENST00000384722 107 ntBASIC0.61□□□□□ -2.31
CLSTN3Q9BQT9 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.61□□□□□ -2.31
CLSTN3Q9BQT9 SNORD33.1-201ENST00000516213 88 ntBASIC0.61□□□□□ -2.31
CLSTN3Q9BQT9 AL365222.1-201ENST00000614661 98 ntBASIC0.61□□□□□ -2.31
CLSTN3Q9BQT9 AP001362.1-201ENST00000625165 124 ntBASIC0.61□□□□□ -2.31
CLSTN3Q9BQT9 AC132825.6-201ENST00000638861 357 ntBASIC0.61□□□□□ -2.31
CLSTN3Q9BQT9 RNU4-67P-201ENST00000364569 141 ntBASIC0.6□□□□□ -2.31
CLSTN3Q9BQT9 Y_RNA.362-201ENST00000365518 110 ntBASIC0.6□□□□□ -2.31
CLSTN3Q9BQT9 MIR34C-201ENST00000384831 77 ntBASIC0.6□□□□□ -2.31
CLSTN3Q9BQT9 SNORA7.5-201ENST00000410672 110 ntBASIC0.6□□□□□ -2.31
CLSTN3Q9BQT9 AC008267.6-201ENST00000441664 139 ntBASIC0.6□□□□□ -2.31
CLSTN3Q9BQT9 SNORA31.14-201ENST00000516728 116 ntBASIC0.6□□□□□ -2.31
CLSTN3Q9BQT9 MIR4500-201ENST00000579472 76 ntBASIC0.6□□□□□ -2.31
CLSTN3Q9BQT9 RNU6-363P-201ENST00000362895 105 ntBASIC0.59□□□□□ -2.31
CLSTN3Q9BQT9 MIR548A1-201ENST00000385041 97 ntBASIC0.59□□□□□ -2.31
CLSTN3Q9BQT9 RN7SKP12-201ENST00000516275 143 ntBASIC0.59□□□□□ -2.31
CLSTN3Q9BQT9 RNU4-54P-201ENST00000516428 129 ntBASIC0.59□□□□□ -2.31
CLSTN3Q9BQT9 AC007012.1-201ENST00000567192 175 ntBASIC0.59□□□□□ -2.31
CLSTN3Q9BQT9 MIR3678-201ENST00000578455 94 ntBASIC0.59□□□□□ -2.31
CLSTN3Q9BQT9 MIR548H5-201ENST00000580314 60 ntBASIC0.59□□□□□ -2.31
CLSTN3Q9BQT9 Y_RNA.56-201ENST00000362798 112 ntBASIC0.58□□□□□ -2.32
CLSTN3Q9BQT9 Y_RNA.353-201ENST00000365440 108 ntBASIC0.58□□□□□ -2.32
CLSTN3Q9BQT9 Y_RNA.360-201ENST00000365512 102 ntBASIC0.58□□□□□ -2.32
CLSTN3Q9BQT9 Y_RNA.563-201ENST00000384707 108 ntBASIC0.58□□□□□ -2.32
CLSTN3Q9BQT9 MIR644A-201ENST00000385262 94 ntBASIC0.58□□□□□ -2.32
CLSTN3Q9BQT9 MIR548A3-201ENST00000385297 97 ntBASIC0.58□□□□□ -2.32
CLSTN3Q9BQT9 RNU6-679P-201ENST00000391003 106 ntBASIC0.58□□□□□ -2.32
CLSTN3Q9BQT9 MIR4679-2-201ENST00000578358 77 ntBASIC0.58□□□□□ -2.32
CLSTN3Q9BQT9 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.58□□□□□ -2.32
CLSTN3Q9BQT9 AC092634.7-201ENST00000621022 103 ntBASIC0.58□□□□□ -2.32
CLSTN3Q9BQT9 AL035470.1-201ENST00000622571 220 ntBASIC0.58□□□□□ -2.32
CLSTN3Q9BQT9 RNA5SP245-201ENST00000364239 121 ntBASIC0.57□□□□□ -2.32
CLSTN3Q9BQT9 RNU6-22P-201ENST00000384355 107 ntBASIC0.57□□□□□ -2.32
CLSTN3Q9BQT9 RNU6-1117P-201ENST00000384525 104 ntBASIC0.57□□□□□ -2.32
CLSTN3Q9BQT9 RNU6-816P-201ENST00000390914 107 ntBASIC0.57□□□□□ -2.32
CLSTN3Q9BQT9 RNU6-1268P-201ENST00000391214 107 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 205.5 ms