Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 RNA5SP393-201ENST00000363423 117 ntBASIC2.62□□□□□ -1.99
TRIM47Q96LD4 SNORD113-4-201ENST00000364802 75 ntBASIC2.62□□□□□ -1.99
TRIM47Q96LD4 RNU1-138P-201ENST00000384093 164 ntBASIC2.62□□□□□ -1.99
TRIM47Q96LD4 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.62□□□□□ -1.99
TRIM47Q96LD4 SUMO1P4-201ENST00000429430 302 ntBASIC2.62□□□□□ -1.99
TRIM47Q96LD4 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
TRIM47Q96LD4 RNVU1-2-201ENST00000516326 135 ntBASIC2.62□□□□□ -1.99
TRIM47Q96LD4 RNA5SP402-201ENST00000517148 110 ntBASIC2.62□□□□□ -1.99
TRIM47Q96LD4 RNU6-1057P-201ENST00000517162 102 ntBASIC2.62□□□□□ -1.99
TRIM47Q96LD4 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.62□□□□□ -1.99
TRIM47Q96LD4 AL596028.1-201ENST00000326971 197 ntBASIC2.61□□□□□ -1.99
TRIM47Q96LD4 Y_RNA.536-201ENST00000384621 113 ntBASIC2.61□□□□□ -1.99
TRIM47Q96LD4 RNU11-3P-201ENST00000391111 133 ntBASIC2.61□□□□□ -1.99
TRIM47Q96LD4 SNORA26.9-201ENST00000391322 122 ntBASIC2.61□□□□□ -1.99
TRIM47Q96LD4 SNORD100-201ENST00000408573 76 ntBASIC2.61□□□□□ -1.99
TRIM47Q96LD4 RNU6-274P-201ENST00000459566 107 ntBASIC2.61□□□□□ -1.99
TRIM47Q96LD4 Y_RNA.809-201ENST00000516058 95 ntBASIC2.61□□□□□ -1.99
TRIM47Q96LD4 RNU6-752P-201ENST00000516376 102 ntBASIC2.61□□□□□ -1.99
TRIM47Q96LD4 MIR4446-201ENST00000578505 67 ntBASIC2.61□□□□□ -1.99
TRIM47Q96LD4 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.61□□□□□ -1.99
TRIM47Q96LD4 RNU6-668P-201ENST00000364180 107 ntBASIC2.6□□□□□ -1.99
TRIM47Q96LD4 RNU1-52P-201ENST00000384190 164 ntBASIC2.6□□□□□ -1.99
TRIM47Q96LD4 MIR451A-201ENST00000385059 72 ntBASIC2.6□□□□□ -1.99
TRIM47Q96LD4 MIR4491-201ENST00000581087 68 ntBASIC2.6□□□□□ -1.99
TRIM47Q96LD4 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.6□□□□□ -1.99
TRIM47Q96LD4 RNU6-1260P-201ENST00000362944 107 ntBASIC2.59□□□□□ -1.99
TRIM47Q96LD4 SNORA16B-201ENST00000364674 135 ntBASIC2.59□□□□□ -1.99
TRIM47Q96LD4 Y_RNA.375-201ENST00000365625 101 ntBASIC2.59□□□□□ -1.99
TRIM47Q96LD4 MIR221-201ENST00000385135 110 ntBASIC2.59□□□□□ -1.99
TRIM47Q96LD4 MIR519A1-201ENST00000385257 85 ntBASIC2.59□□□□□ -1.99
TRIM47Q96LD4 RNU6-935P-201ENST00000410371 100 ntBASIC2.59□□□□□ -1.99
TRIM47Q96LD4 AC244098.3-201ENST00000424803 96 ntBASIC2.59□□□□□ -1.99
TRIM47Q96LD4 MTND4LP1-201ENST00000446263 157 ntBASIC2.59□□□□□ -1.99
TRIM47Q96LD4 RNU6-1053P-201ENST00000515930 101 ntBASIC2.59□□□□□ -1.99
TRIM47Q96LD4 MIR5194-201ENST00000582634 120 ntBASIC2.59□□□□□ -1.99
TRIM47Q96LD4 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
TRIM47Q96LD4 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -2
TRIM47Q96LD4 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
TRIM47Q96LD4 RNA5SP48-201ENST00000363969 126 ntBASIC2.58□□□□□ -2
TRIM47Q96LD4 RNU6-382P-201ENST00000365181 106 ntBASIC2.58□□□□□ -2
TRIM47Q96LD4 MT-TF-201ENST00000387314 71 ntBASIC2.58□□□□□ -2
TRIM47Q96LD4 RNA5SP481-201ENST00000516814 122 ntBASIC2.58□□□□□ -2
TRIM47Q96LD4 MIR4498-201ENST00000577599 66 ntBASIC2.58□□□□□ -2
TRIM47Q96LD4 MTRNR2L2-201ENST00000604882 87 ntBASIC2.58□□□□□ -2
TRIM47Q96LD4 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
TRIM47Q96LD4 RNU6-112P-201ENST00000363599 104 ntBASIC2.57□□□□□ -2
TRIM47Q96LD4 RNU6-1335P-201ENST00000365426 107 ntBASIC2.57□□□□□ -2
TRIM47Q96LD4 RNU6-1177P-201ENST00000391058 104 ntBASIC2.57□□□□□ -2
TRIM47Q96LD4 Y_RNA.588-201ENST00000391254 102 ntBASIC2.57□□□□□ -2
TRIM47Q96LD4 RNU7-62P-201ENST00000458856 62 ntBASIC2.57□□□□□ -2
TRIM47Q96LD4 uc_338.6-201ENST00000613544 171 ntBASIC2.57□□□□□ -2
TRIM47Q96LD4 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
TRIM47Q96LD4 MIR101-2-201ENST00000362195 79 ntBASIC2.56□□□□□ -2
TRIM47Q96LD4 Y_RNA.258-201ENST00000364613 105 ntBASIC2.56□□□□□ -2
TRIM47Q96LD4 SNORA67.1-201ENST00000364749 141 ntBASIC2.56□□□□□ -2
TRIM47Q96LD4 MIR1287-201ENST00000408492 90 ntBASIC2.56□□□□□ -2
TRIM47Q96LD4 RNU4-88P-201ENST00000411220 86 ntBASIC2.56□□□□□ -2
TRIM47Q96LD4 SCARNA21.1-201ENST00000515996 128 ntBASIC2.56□□□□□ -2
TRIM47Q96LD4 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.56□□□□□ -2
TRIM47Q96LD4 MIR548H5-201ENST00000580314 60 ntBASIC2.56□□□□□ -2
TRIM47Q96LD4 MIR4264-201ENST00000583520 66 ntBASIC2.56□□□□□ -2
TRIM47Q96LD4 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC2.56□□□□□ -2
TRIM47Q96LD4 AC131280.1-202ENST00000624067 4211 ntBASIC2.56□□□□□ -2
TRIM47Q96LD4 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
TRIM47Q96LD4 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
TRIM47Q96LD4 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
TRIM47Q96LD4 RNU1-17P-201ENST00000363022 152 ntBASIC2.55□□□□□ -2
TRIM47Q96LD4 RNU6-396P-201ENST00000365369 105 ntBASIC2.55□□□□□ -2
TRIM47Q96LD4 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC2.55□□□□□ -2
TRIM47Q96LD4 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
TRIM47Q96LD4 MIR1283-2-201ENST00000408621 87 ntBASIC2.55□□□□□ -2
TRIM47Q96LD4 MIR1302-7-201ENST00000408841 72 ntBASIC2.55□□□□□ -2
TRIM47Q96LD4 SNORD111.1-201ENST00000516421 86 ntBASIC2.55□□□□□ -2
TRIM47Q96LD4 MIR3920-201ENST00000581751 86 ntBASIC2.55□□□□□ -2
TRIM47Q96LD4 RNU7-10P-201ENST00000607194 63 ntBASIC2.55□□□□□ -2
TRIM47Q96LD4 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.55□□□□□ -2
TRIM47Q96LD4 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
TRIM47Q96LD4 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.55□□□□□ -2
TRIM47Q96LD4 SNORA48.1-201ENST00000390879 135 ntBASIC2.54□□□□□ -2
TRIM47Q96LD4 RNU6-1054P-201ENST00000411293 104 ntBASIC2.54□□□□□ -2
TRIM47Q96LD4 RNU6-403P-201ENST00000363163 104 ntBASIC2.53□□□□□ -2
TRIM47Q96LD4 SNORA25.3-201ENST00000363205 127 ntBASIC2.53□□□□□ -2
TRIM47Q96LD4 MIR524-201ENST00000385242 87 ntBASIC2.53□□□□□ -2
TRIM47Q96LD4 SNORD93-201ENST00000408813 74 ntBASIC2.53□□□□□ -2
TRIM47Q96LD4 RNU6-322P-201ENST00000516010 103 ntBASIC2.53□□□□□ -2
TRIM47Q96LD4 MIR6845-201ENST00000613182 61 ntBASIC2.53□□□□□ -2
TRIM47Q96LD4 AC245884.12-201ENST00000615364 59 ntBASIC2.53□□□□□ -2
TRIM47Q96LD4 MIR6766-201ENST00000622641 72 ntBASIC2.53□□□□□ -2
TRIM47Q96LD4 MIRLET7G-201ENST00000362280 84 ntBASIC2.52□□□□□ -2.01
TRIM47Q96LD4 SNORA31.11-201ENST00000516528 139 ntBASIC2.52□□□□□ -2.01
TRIM47Q96LD4 MIR4781-201ENST00000585250 76 ntBASIC2.52□□□□□ -2.01
TRIM47Q96LD4 AC013244.2-201ENST00000603396 103 ntBASIC2.52□□□□□ -2.01
TRIM47Q96LD4 MIR6132-201ENST00000622083 109 ntBASIC2.52□□□□□ -2.01
TRIM47Q96LD4 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
TRIM47Q96LD4 AC023934.1-201ENST00000574529 2389 ntBASIC2.51□□□□□ -2.01
TRIM47Q96LD4 MIR3126-201ENST00000577443 74 ntBASIC2.51□□□□□ -2.01
TRIM47Q96LD4 MIR3938-201ENST00000582157 103 ntBASIC2.51□□□□□ -2.01
TRIM47Q96LD4 MIR653-201ENST00000385279 96 ntBASIC2.5□□□□□ -2.01
TRIM47Q96LD4 RNA5SP200-201ENST00000516360 103 ntBASIC2.5□□□□□ -2.01
TRIM47Q96LD4 RNA5SP82-201ENST00000516707 92 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 223.5 ms