Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 MIR4744-201ENST00000581563 82 ntBASIC-1□□□□□ -2.57
CLHC1Q8NHS4 MIR548AE1-201ENST00000583292 70 ntBASIC-1□□□□□ -2.57
CLHC1Q8NHS4 AC011603.4-201ENST00000611325 277 ntBASIC-1□□□□□ -2.57
CLHC1Q8NHS4 Y_RNA.416-201ENST00000384014 113 ntBASIC-1.01□□□□□ -2.57
CLHC1Q8NHS4 RNU6-875P-201ENST00000516488 106 ntBASIC-1.01□□□□□ -2.57
CLHC1Q8NHS4 RNU6-690P-201ENST00000365242 106 ntBASIC-1.02□□□□□ -2.57
CLHC1Q8NHS4 RNU6-472P-201ENST00000384299 107 ntBASIC-1.02□□□□□ -2.57
CLHC1Q8NHS4 RNU6-154P-201ENST00000384306 106 ntBASIC-1.02□□□□□ -2.57
CLHC1Q8NHS4 AC113618.1-201ENST00000416747 285 ntBASIC-1.02□□□□□ -2.57
CLHC1Q8NHS4 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.02□□□□□ -2.57
CLHC1Q8NHS4 RNA5SP169-201ENST00000517268 117 ntBASIC-1.02□□□□□ -2.57
CLHC1Q8NHS4 MIR4460-201ENST00000577862 86 ntBASIC-1.02□□□□□ -2.57
CLHC1Q8NHS4 Y_RNA.52-201ENST00000362760 96 ntBASIC-1.03□□□□□ -2.57
CLHC1Q8NHS4 Y_RNA.328-201ENST00000365208 113 ntBASIC-1.03□□□□□ -2.57
CLHC1Q8NHS4 Y_RNA.407-201ENST00000383986 113 ntBASIC-1.03□□□□□ -2.57
CLHC1Q8NHS4 RNU6-900P-201ENST00000384498 102 ntBASIC-1.03□□□□□ -2.57
CLHC1Q8NHS4 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.03□□□□□ -2.57
CLHC1Q8NHS4 RNU7-106P-201ENST00000459514 67 ntBASIC-1.03□□□□□ -2.57
CLHC1Q8NHS4 U2.14-201ENST00000615943 113 ntBASIC-1.03□□□□□ -2.57
CLHC1Q8NHS4 Y_RNA.28-201ENST00000362554 111 ntBASIC-1.04□□□□□ -2.58
CLHC1Q8NHS4 Y_RNA.210-201ENST00000364161 110 ntBASIC-1.04□□□□□ -2.58
CLHC1Q8NHS4 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.04□□□□□ -2.58
CLHC1Q8NHS4 RNA5SP331-201ENST00000364986 107 ntBASIC-1.04□□□□□ -2.58
CLHC1Q8NHS4 RNY1P7-201ENST00000384743 110 ntBASIC-1.04□□□□□ -2.58
CLHC1Q8NHS4 MT-TY-201ENST00000387409 66 ntBASIC-1.04□□□□□ -2.58
CLHC1Q8NHS4 RNU6-578P-201ENST00000390980 103 ntBASIC-1.04□□□□□ -2.58
CLHC1Q8NHS4 RNU6-1307P-201ENST00000391012 103 ntBASIC-1.04□□□□□ -2.58
CLHC1Q8NHS4 Y_RNA.590-201ENST00000410140 107 ntBASIC-1.04□□□□□ -2.58
CLHC1Q8NHS4 MTND5P22-201ENST00000458380 195 ntBASIC-1.04□□□□□ -2.58
CLHC1Q8NHS4 MRPS18CP4-201ENST00000535821 231 ntBASIC-1.04□□□□□ -2.58
CLHC1Q8NHS4 MIR20A-201ENST00000362279 71 ntBASIC-1.05□□□□□ -2.58
CLHC1Q8NHS4 Y_RNA.262-201ENST00000364641 102 ntBASIC-1.05□□□□□ -2.58
CLHC1Q8NHS4 MIR2113-201ENST00000459007 91 ntBASIC-1.05□□□□□ -2.58
CLHC1Q8NHS4 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.05□□□□□ -2.58
CLHC1Q8NHS4 RNU7-2P-201ENST00000516096 62 ntBASIC-1.05□□□□□ -2.58
CLHC1Q8NHS4 RNU2-4P-201ENST00000606190 192 ntBASIC-1.05□□□□□ -2.58
CLHC1Q8NHS4 Y_RNA.356-201ENST00000365475 113 ntBASIC-1.06□□□□□ -2.58
CLHC1Q8NHS4 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.06□□□□□ -2.58
CLHC1Q8NHS4 RNU6-643P-201ENST00000384018 107 ntBASIC-1.06□□□□□ -2.58
CLHC1Q8NHS4 Y_RNA.455-201ENST00000384230 98 ntBASIC-1.06□□□□□ -2.58
CLHC1Q8NHS4 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.06□□□□□ -2.58
CLHC1Q8NHS4 AC113195.1-201ENST00000579952 141 ntBASIC-1.06□□□□□ -2.58
CLHC1Q8NHS4 AC139792.2-201ENST00000624218 587 ntBASIC-1.06□□□□□ -2.58
CLHC1Q8NHS4 MIR369-201ENST00000362155 70 ntBASIC-1.07□□□□□ -2.58
CLHC1Q8NHS4 Y_RNA.35-201ENST00000362601 101 ntBASIC-1.07□□□□□ -2.58
CLHC1Q8NHS4 Y_RNA.342-201ENST00000365352 113 ntBASIC-1.07□□□□□ -2.58
CLHC1Q8NHS4 Y_RNA.371-201ENST00000365591 113 ntBASIC-1.07□□□□□ -2.58
CLHC1Q8NHS4 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.07□□□□□ -2.58
CLHC1Q8NHS4 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.07□□□□□ -2.58
CLHC1Q8NHS4 RNU6-1009P-201ENST00000390996 107 ntBASIC-1.07□□□□□ -2.58
CLHC1Q8NHS4 AC244090.1-201ENST00000441884 93 ntBASIC-1.07□□□□□ -2.58
CLHC1Q8NHS4 AC021146.6-201ENST00000514659 117 ntBASIC-1.07□□□□□ -2.58
CLHC1Q8NHS4 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-1.07□□□□□ -2.58
CLHC1Q8NHS4 RNU5B-6P-201ENST00000516765 68 ntBASIC-1.07□□□□□ -2.58
CLHC1Q8NHS4 MIR4280-201ENST00000582178 76 ntBASIC-1.07□□□□□ -2.58
CLHC1Q8NHS4 RNU6-1283P-201ENST00000365314 105 ntBASIC-1.08□□□□□ -2.58
CLHC1Q8NHS4 SNORD56B-201ENST00000384713 71 ntBASIC-1.08□□□□□ -2.58
CLHC1Q8NHS4 MIR587-201ENST00000384845 96 ntBASIC-1.08□□□□□ -2.58
CLHC1Q8NHS4 SNORD77B-201ENST00000391112 67 ntBASIC-1.08□□□□□ -2.58
CLHC1Q8NHS4 Y_RNA.619-201ENST00000410951 90 ntBASIC-1.08□□□□□ -2.58
CLHC1Q8NHS4 Y_RNA.679-201ENST00000516416 91 ntBASIC-1.08□□□□□ -2.58
CLHC1Q8NHS4 Y_RNA.711-201ENST00000516993 102 ntBASIC-1.08□□□□□ -2.58
CLHC1Q8NHS4 AC007012.1-201ENST00000567192 175 ntBASIC-1.08□□□□□ -2.58
CLHC1Q8NHS4 AC138907.4-201ENST00000570107 226 ntBASIC-1.08□□□□□ -2.58
CLHC1Q8NHS4 MIR376B-201ENST00000614515 100 ntBASIC-1.08□□□□□ -2.58
CLHC1Q8NHS4 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.09□□□□□ -2.58
CLHC1Q8NHS4 RNU6-1109P-201ENST00000391187 107 ntBASIC-1.09□□□□□ -2.58
CLHC1Q8NHS4 AL445193.1-201ENST00000441183 141 ntBASIC-1.09□□□□□ -2.58
CLHC1Q8NHS4 SNORA13-201ENST00000458790 133 ntBASIC-1.09□□□□□ -2.58
CLHC1Q8NHS4 MTND3P22-201ENST00000510932 243 ntBASIC-1.09□□□□□ -2.58
CLHC1Q8NHS4 RNU6-850P-201ENST00000516934 103 ntBASIC-1.09□□□□□ -2.58
CLHC1Q8NHS4 AC021443.1-201ENST00000604478 211 ntBASIC-1.09□□□□□ -2.58
CLHC1Q8NHS4 MIR335-201ENST00000362173 94 ntBASIC-1.1□□□□□ -2.59
CLHC1Q8NHS4 Y_RNA.158-201ENST00000363651 101 ntBASIC-1.1□□□□□ -2.59
CLHC1Q8NHS4 Y_RNA.237-201ENST00000364439 102 ntBASIC-1.1□□□□□ -2.59
CLHC1Q8NHS4 SNORD115-35-201ENST00000365122 82 ntBASIC-1.1□□□□□ -2.59
CLHC1Q8NHS4 SNORA51.5-201ENST00000384126 131 ntBASIC-1.1□□□□□ -2.59
CLHC1Q8NHS4 RNU7-164P-201ENST00000459221 62 ntBASIC-1.1□□□□□ -2.59
CLHC1Q8NHS4 RNU7-123P-201ENST00000515911 60 ntBASIC-1.1□□□□□ -2.59
CLHC1Q8NHS4 RNU6-287P-201ENST00000516230 98 ntBASIC-1.1□□□□□ -2.59
CLHC1Q8NHS4 RNU6-988P-201ENST00000519081 107 ntBASIC-1.1□□□□□ -2.59
CLHC1Q8NHS4 MIR4795-201ENST00000584182 89 ntBASIC-1.1□□□□□ -2.59
CLHC1Q8NHS4 AC009779.6-201ENST00000603972 165 ntBASIC-1.1□□□□□ -2.59
CLHC1Q8NHS4 Y_RNA.121-201ENST00000363309 113 ntBASIC-1.11□□□□□ -2.59
CLHC1Q8NHS4 Y_RNA.505-201ENST00000384489 102 ntBASIC-1.11□□□□□ -2.59
CLHC1Q8NHS4 MIR204-201ENST00000385200 110 ntBASIC-1.11□□□□□ -2.59
CLHC1Q8NHS4 RNU7-55P-201ENST00000459426 62 ntBASIC-1.11□□□□□ -2.59
CLHC1Q8NHS4 RNU6-240P-201ENST00000516098 97 ntBASIC-1.11□□□□□ -2.59
CLHC1Q8NHS4 MIR6851-201ENST00000617060 67 ntBASIC-1.11□□□□□ -2.59
CLHC1Q8NHS4 AC087741.2-201ENST00000619415 172 ntBASIC-1.11□□□□□ -2.59
CLHC1Q8NHS4 MIR6738-201ENST00000619620 64 ntBASIC-1.11□□□□□ -2.59
CLHC1Q8NHS4 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-1.11□□□□□ -2.59
CLHC1Q8NHS4 RNU4-32P-201ENST00000363404 141 ntBASIC-1.12□□□□□ -2.59
CLHC1Q8NHS4 Y_RNA.431-201ENST00000384086 102 ntBASIC-1.12□□□□□ -2.59
CLHC1Q8NHS4 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-1.12□□□□□ -2.59
CLHC1Q8NHS4 SCARNA17-201ENST00000516183 144 ntBASIC-1.12□□□□□ -2.59
CLHC1Q8NHS4 RNU6-1163P-201ENST00000364516 107 ntBASIC-1.13□□□□□ -2.59
CLHC1Q8NHS4 Y_RNA.447-201ENST00000384184 113 ntBASIC-1.13□□□□□ -2.59
CLHC1Q8NHS4 MIR516A2-201ENST00000384888 90 ntBASIC-1.13□□□□□ -2.59
CLHC1Q8NHS4 MIR516A1-201ENST00000385033 90 ntBASIC-1.13□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 218.9 ms