Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 Y_RNA.567-201ENST00000384736 106 ntBASIC0.57□□□□□ -2.32
USP38Q8NB14 MIR1263-201ENST00000408324 86 ntBASIC0.57□□□□□ -2.32
USP38Q8NB14 AL158147.1-201ENST00000443970 75 ntBASIC0.57□□□□□ -2.32
USP38Q8NB14 RNU6-781P-201ENST00000516377 101 ntBASIC0.57□□□□□ -2.32
USP38Q8NB14 SNORA31.14-201ENST00000516728 116 ntBASIC0.57□□□□□ -2.32
USP38Q8NB14 AC138749.4-201ENST00000563970 127 ntBASIC0.57□□□□□ -2.32
USP38Q8NB14 MIR5589-201ENST00000579442 60 ntBASIC0.57□□□□□ -2.32
USP38Q8NB14 U7.2-201ENST00000607576 63 ntBASIC0.57□□□□□ -2.32
USP38Q8NB14 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
USP38Q8NB14 Y_RNA.32-201ENST00000362589 110 ntBASIC0.56□□□□□ -2.32
USP38Q8NB14 Y_RNA.119-201ENST00000363301 96 ntBASIC0.56□□□□□ -2.32
USP38Q8NB14 RNU6-647P-201ENST00000364243 107 ntBASIC0.56□□□□□ -2.32
USP38Q8NB14 RNA5SP331-201ENST00000364986 107 ntBASIC0.56□□□□□ -2.32
USP38Q8NB14 RNU6-291P-201ENST00000384720 107 ntBASIC0.56□□□□□ -2.32
USP38Q8NB14 Y_RNA.568-201ENST00000384742 113 ntBASIC0.56□□□□□ -2.32
USP38Q8NB14 RNU6-1307P-201ENST00000391012 103 ntBASIC0.56□□□□□ -2.32
USP38Q8NB14 RNU6-257P-201ENST00000410238 98 ntBASIC0.56□□□□□ -2.32
USP38Q8NB14 AL157398.1-201ENST00000452981 186 ntBASIC0.56□□□□□ -2.32
USP38Q8NB14 RNU7-6P-201ENST00000516845 62 ntBASIC0.56□□□□□ -2.32
USP38Q8NB14 RNA5SP94-201ENST00000516917 108 ntBASIC0.56□□□□□ -2.32
USP38Q8NB14 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.56□□□□□ -2.32
USP38Q8NB14 uc_338.16-201ENST00000621804 95 ntBASIC0.56□□□□□ -2.32
USP38Q8NB14 RNU6-774P-201ENST00000363238 107 ntBASIC0.55□□□□□ -2.32
USP38Q8NB14 Y_RNA.174-201ENST00000363781 105 ntBASIC0.55□□□□□ -2.32
USP38Q8NB14 RNY1P5-201ENST00000383890 115 ntBASIC0.55□□□□□ -2.32
USP38Q8NB14 Y_RNA.448-201ENST00000384185 108 ntBASIC0.55□□□□□ -2.32
USP38Q8NB14 MIR206-201ENST00000384872 86 ntBASIC0.55□□□□□ -2.32
USP38Q8NB14 MIR759-201ENST00000390224 91 ntBASIC0.55□□□□□ -2.32
USP38Q8NB14 RNU6-1321P-201ENST00000390905 107 ntBASIC0.55□□□□□ -2.32
USP38Q8NB14 RNU6-735P-201ENST00000410612 107 ntBASIC0.55□□□□□ -2.32
USP38Q8NB14 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.55□□□□□ -2.32
USP38Q8NB14 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
USP38Q8NB14 RNU4-67P-201ENST00000364569 141 ntBASIC0.54□□□□□ -2.32
USP38Q8NB14 RNA5SP517-201ENST00000364724 117 ntBASIC0.54□□□□□ -2.32
USP38Q8NB14 Y_RNA.343-201ENST00000365354 112 ntBASIC0.54□□□□□ -2.32
USP38Q8NB14 RNU6-616P-201ENST00000384353 107 ntBASIC0.54□□□□□ -2.32
USP38Q8NB14 SNORD71-201ENST00000411292 86 ntBASIC0.54□□□□□ -2.32
USP38Q8NB14 AC114737.2-201ENST00000421583 173 ntBASIC0.54□□□□□ -2.32
USP38Q8NB14 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.54□□□□□ -2.32
USP38Q8NB14 AC087741.2-201ENST00000619415 172 ntBASIC0.54□□□□□ -2.32
USP38Q8NB14 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.54□□□□□ -2.32
USP38Q8NB14 MIR3133-201ENST00000583157 78 ntBASIC0.53□□□□□ -2.32
USP38Q8NB14 RNA5SP245-201ENST00000364239 121 ntBASIC0.52□□□□□ -2.33
USP38Q8NB14 RNU6-1229P-201ENST00000364295 107 ntBASIC0.52□□□□□ -2.33
USP38Q8NB14 SNORA40-201ENST00000388090 126 ntBASIC0.52□□□□□ -2.33
USP38Q8NB14 MIR4500-201ENST00000579472 76 ntBASIC0.52□□□□□ -2.33
USP38Q8NB14 SNORA25.18-201ENST00000607153 114 ntBASIC0.52□□□□□ -2.33
USP38Q8NB14 Y_RNA.773-201ENST00000607168 90 ntBASIC0.52□□□□□ -2.33
USP38Q8NB14 RNY4P3-201ENST00000365254 95 ntBASIC0.51□□□□□ -2.33
USP38Q8NB14 SNORA40.8-201ENST00000411034 126 ntBASIC0.51□□□□□ -2.33
USP38Q8NB14 RNU7-48P-201ENST00000458875 63 ntBASIC0.51□□□□□ -2.33
USP38Q8NB14 RNU7-2P-201ENST00000516096 62 ntBASIC0.51□□□□□ -2.33
USP38Q8NB14 RN7SKP12-201ENST00000516275 143 ntBASIC0.51□□□□□ -2.33
USP38Q8NB14 RNU6-1234P-201ENST00000516877 103 ntBASIC0.51□□□□□ -2.33
USP38Q8NB14 TUG1_4.1-201ENST00000619464 181 ntBASIC0.51□□□□□ -2.33
USP38Q8NB14 Y_RNA.98-201ENST00000363109 102 ntBASIC0.5□□□□□ -2.33
USP38Q8NB14 Y_RNA.198-201ENST00000364013 98 ntBASIC0.5□□□□□ -2.33
USP38Q8NB14 Y_RNA.213-201ENST00000364178 111 ntBASIC0.5□□□□□ -2.33
USP38Q8NB14 RNU6-865P-201ENST00000364772 107 ntBASIC0.5□□□□□ -2.33
USP38Q8NB14 RNY1P2-201ENST00000364820 117 ntBASIC0.5□□□□□ -2.33
USP38Q8NB14 SNORA50A-201ENST00000384225 134 ntBASIC0.5□□□□□ -2.33
USP38Q8NB14 Y_RNA.525-201ENST00000384570 113 ntBASIC0.5□□□□□ -2.33
USP38Q8NB14 Y_RNA.549-201ENST00000384657 102 ntBASIC0.5□□□□□ -2.33
USP38Q8NB14 Y_RNA.586-201ENST00000391146 98 ntBASIC0.5□□□□□ -2.33
USP38Q8NB14 Y_RNA.630-201ENST00000411370 108 ntBASIC0.5□□□□□ -2.33
USP38Q8NB14 snoU13.19-201ENST00000459148 104 ntBASIC0.5□□□□□ -2.33
USP38Q8NB14 RNU6-1211P-201ENST00000459179 105 ntBASIC0.5□□□□□ -2.33
USP38Q8NB14 RNU6-1061P-201ENST00000516530 99 ntBASIC0.5□□□□□ -2.33
USP38Q8NB14 MIR3163-201ENST00000581592 73 ntBASIC0.5□□□□□ -2.33
USP38Q8NB14 MIR6718-201ENST00000616153 80 ntBASIC0.5□□□□□ -2.33
USP38Q8NB14 SNORA36.1-201ENST00000363424 132 ntBASIC0.49□□□□□ -2.33
USP38Q8NB14 SNORA63.5-201ENST00000363548 123 ntBASIC0.49□□□□□ -2.33
USP38Q8NB14 SNORD18A-201ENST00000363753 72 ntBASIC0.49□□□□□ -2.33
USP38Q8NB14 SNORD115-35-201ENST00000365122 82 ntBASIC0.49□□□□□ -2.33
USP38Q8NB14 RNU6-1062P-201ENST00000383908 107 ntBASIC0.49□□□□□ -2.33
USP38Q8NB14 RNU6-187P-201ENST00000384139 106 ntBASIC0.49□□□□□ -2.33
USP38Q8NB14 Y_RNA.528-201ENST00000384575 108 ntBASIC0.49□□□□□ -2.33
USP38Q8NB14 MIRLET7F2-201ENST00000385277 83 ntBASIC0.49□□□□□ -2.33
USP38Q8NB14 SNORA68.3-201ENST00000515906 83 ntBASIC0.49□□□□□ -2.33
USP38Q8NB14 RNU6-971P-201ENST00000516920 106 ntBASIC0.49□□□□□ -2.33
USP38Q8NB14 MIR1255B1-201ENST00000636325 63 ntBASIC0.49□□□□□ -2.33
USP38Q8NB14 SNORD58C-201ENST00000365223 64 ntBASIC0.48□□□□□ -2.33
USP38Q8NB14 SNORA8.2-201ENST00000384372 139 ntBASIC0.48□□□□□ -2.33
USP38Q8NB14 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.48□□□□□ -2.33
USP38Q8NB14 RNA5SP25-201ENST00000410815 110 ntBASIC0.48□□□□□ -2.33
USP38Q8NB14 RNA5SP136-201ENST00000410906 107 ntBASIC0.48□□□□□ -2.33
USP38Q8NB14 SUMO1P3-201ENST00000439961 304 ntBASIC0.48□□□□□ -2.33
USP38Q8NB14 Y_RNA.328-201ENST00000365208 113 ntBASIC0.47□□□□□ -2.33
USP38Q8NB14 RNU6-429P-201ENST00000384582 108 ntBASIC0.47□□□□□ -2.33
USP38Q8NB14 MIR518A1-201ENST00000385068 85 ntBASIC0.47□□□□□ -2.33
USP38Q8NB14 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.47□□□□□ -2.33
USP38Q8NB14 RNU7-107P-201ENST00000459121 61 ntBASIC0.47□□□□□ -2.33
USP38Q8NB14 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.46□□□□□ -2.34
USP38Q8NB14 Y_RNA.49-201ENST00000362714 112 ntBASIC0.46□□□□□ -2.34
USP38Q8NB14 SNORD115-19-201ENST00000363098 82 ntBASIC0.46□□□□□ -2.34
USP38Q8NB14 SNORD115-18-201ENST00000363293 82 ntBASIC0.46□□□□□ -2.34
USP38Q8NB14 SNORD115-17-201ENST00000364612 82 ntBASIC0.46□□□□□ -2.34
USP38Q8NB14 RNU6-521P-201ENST00000516663 105 ntBASIC0.46□□□□□ -2.34
USP38Q8NB14 RNU6-135P-201ENST00000516769 101 ntBASIC0.46□□□□□ -2.34
USP38Q8NB14 RNA5SP268-201ENST00000516828 124 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 215.5 ms