Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 RNA5SP222-201ENST00000411039 105 ntBASIC0.67□□□□□ -2.3
KRTCAP3Q53RY4 RNU7-48P-201ENST00000458875 63 ntBASIC0.67□□□□□ -2.3
KRTCAP3Q53RY4 RNU6-448P-201ENST00000517052 107 ntBASIC0.67□□□□□ -2.3
KRTCAP3Q53RY4 AC007012.1-201ENST00000567192 175 ntBASIC0.67□□□□□ -2.3
KRTCAP3Q53RY4 MIR3612-201ENST00000579753 87 ntBASIC0.67□□□□□ -2.3
KRTCAP3Q53RY4 RN7SL793P-201ENST00000583259 296 ntBASIC0.67□□□□□ -2.3
KRTCAP3Q53RY4 MIR6513-201ENST00000621188 64 ntBASIC0.67□□□□□ -2.3
KRTCAP3Q53RY4 RNU6-363P-201ENST00000362895 105 ntBASIC0.66□□□□□ -2.3
KRTCAP3Q53RY4 Y_RNA.98-201ENST00000363109 102 ntBASIC0.66□□□□□ -2.3
KRTCAP3Q53RY4 RNA5SP205-201ENST00000364653 136 ntBASIC0.66□□□□□ -2.3
KRTCAP3Q53RY4 Y_RNA.549-201ENST00000384657 102 ntBASIC0.66□□□□□ -2.3
KRTCAP3Q53RY4 RNU6-1154P-201ENST00000391001 104 ntBASIC0.66□□□□□ -2.3
KRTCAP3Q53RY4 SNORD100-201ENST00000408573 76 ntBASIC0.66□□□□□ -2.3
KRTCAP3Q53RY4 RNU6-765P-201ENST00000516916 99 ntBASIC0.66□□□□□ -2.3
KRTCAP3Q53RY4 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.66□□□□□ -2.3
KRTCAP3Q53RY4 DEFB131E-201ENST00000532329 154 ntBASIC0.66□□□□□ -2.3
KRTCAP3Q53RY4 MTND5P34-201ENST00000568888 325 ntBASIC0.66□□□□□ -2.3
KRTCAP3Q53RY4 MIR376B-201ENST00000614515 100 ntBASIC0.66□□□□□ -2.3
KRTCAP3Q53RY4 AL035470.1-201ENST00000622571 220 ntBASIC0.66□□□□□ -2.3
KRTCAP3Q53RY4 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
KRTCAP3Q53RY4 RNU4-67P-201ENST00000364569 141 ntBASIC0.65□□□□□ -2.31
KRTCAP3Q53RY4 RNU4-45P-201ENST00000365469 141 ntBASIC0.65□□□□□ -2.31
KRTCAP3Q53RY4 SNORA19-201ENST00000384737 128 ntBASIC0.65□□□□□ -2.31
KRTCAP3Q53RY4 MIR508-201ENST00000384857 115 ntBASIC0.65□□□□□ -2.31
KRTCAP3Q53RY4 SNORA7.5-201ENST00000410672 110 ntBASIC0.65□□□□□ -2.31
KRTCAP3Q53RY4 AL353813.1-201ENST00000440700 253 ntBASIC0.65□□□□□ -2.31
KRTCAP3Q53RY4 AC002350.1-201ENST00000490759 375 ntBASIC0.65□□□□□ -2.31
KRTCAP3Q53RY4 RNU6-479P-201ENST00000516348 105 ntBASIC0.65□□□□□ -2.31
KRTCAP3Q53RY4 AP003327.1-201ENST00000529684 127 ntBASIC0.65□□□□□ -2.31
KRTCAP3Q53RY4 MIR4679-2-201ENST00000578358 77 ntBASIC0.65□□□□□ -2.31
KRTCAP3Q53RY4 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.65□□□□□ -2.31
KRTCAP3Q53RY4 AL670379.3-201ENST00000605040 251 ntBASIC0.65□□□□□ -2.31
KRTCAP3Q53RY4 RNU4-58P-201ENST00000363192 141 ntBASIC0.64□□□□□ -2.31
KRTCAP3Q53RY4 MIR34C-201ENST00000384831 77 ntBASIC0.64□□□□□ -2.31
KRTCAP3Q53RY4 RNU6-679P-201ENST00000391003 106 ntBASIC0.64□□□□□ -2.31
KRTCAP3Q53RY4 RPL39P34-201ENST00000477141 156 ntBASIC0.64□□□□□ -2.31
KRTCAP3Q53RY4 MIR4500-201ENST00000579472 76 ntBASIC0.64□□□□□ -2.31
KRTCAP3Q53RY4 SNORA63.5-201ENST00000363548 123 ntBASIC0.63□□□□□ -2.31
KRTCAP3Q53RY4 RNU6-865P-201ENST00000364772 107 ntBASIC0.63□□□□□ -2.31
KRTCAP3Q53RY4 RNA5SP117-201ENST00000365294 118 ntBASIC0.63□□□□□ -2.31
KRTCAP3Q53RY4 SNORA36.2-201ENST00000384004 127 ntBASIC0.63□□□□□ -2.31
KRTCAP3Q53RY4 RNU6-429P-201ENST00000384582 108 ntBASIC0.63□□□□□ -2.31
KRTCAP3Q53RY4 RNU6-816P-201ENST00000390914 107 ntBASIC0.63□□□□□ -2.31
KRTCAP3Q53RY4 RNU6-1268P-201ENST00000391214 107 ntBASIC0.63□□□□□ -2.31
KRTCAP3Q53RY4 RNU6-1239P-201ENST00000391310 107 ntBASIC0.63□□□□□ -2.31
KRTCAP3Q53RY4 RNU6-313P-201ENST00000516317 112 ntBASIC0.63□□□□□ -2.31
KRTCAP3Q53RY4 RNU4-54P-201ENST00000516428 129 ntBASIC0.63□□□□□ -2.31
KRTCAP3Q53RY4 AP001362.1-201ENST00000625165 124 ntBASIC0.63□□□□□ -2.31
KRTCAP3Q53RY4 AL162726.3-218ENST00000636401 95 ntBASIC0.63□□□□□ -2.31
KRTCAP3Q53RY4 MIR18A-201ENST00000362310 71 ntBASIC0.62□□□□□ -2.31
KRTCAP3Q53RY4 Y_RNA.85-201ENST00000363014 111 ntBASIC0.62□□□□□ -2.31
KRTCAP3Q53RY4 Y_RNA.360-201ENST00000365512 102 ntBASIC0.62□□□□□ -2.31
KRTCAP3Q53RY4 Y_RNA.536-201ENST00000384621 113 ntBASIC0.62□□□□□ -2.31
KRTCAP3Q53RY4 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.62□□□□□ -2.31
KRTCAP3Q53RY4 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.62□□□□□ -2.31
KRTCAP3Q53RY4 RNU6-1194P-201ENST00000516208 104 ntBASIC0.62□□□□□ -2.31
KRTCAP3Q53RY4 Y_RNA.697-201ENST00000516776 113 ntBASIC0.62□□□□□ -2.31
KRTCAP3Q53RY4 AC018659.1-201ENST00000551083 169 ntBASIC0.62□□□□□ -2.31
KRTCAP3Q53RY4 MIR6779-201ENST00000617283 64 ntBASIC0.62□□□□□ -2.31
KRTCAP3Q53RY4 RNA5SP347-201ENST00000362445 119 ntBASIC0.61□□□□□ -2.31
KRTCAP3Q53RY4 Y_RNA.155-201ENST00000363632 101 ntBASIC0.61□□□□□ -2.31
KRTCAP3Q53RY4 RNU6-409P-201ENST00000384114 104 ntBASIC0.61□□□□□ -2.31
KRTCAP3Q53RY4 RNU6-1144P-201ENST00000384247 104 ntBASIC0.61□□□□□ -2.31
KRTCAP3Q53RY4 SNORD116-21-201ENST00000384507 92 ntBASIC0.61□□□□□ -2.31
KRTCAP3Q53RY4 RNY1P4-201ENST00000384595 115 ntBASIC0.61□□□□□ -2.31
KRTCAP3Q53RY4 RNU6-291P-201ENST00000384720 107 ntBASIC0.61□□□□□ -2.31
KRTCAP3Q53RY4 MIR936-201ENST00000401264 98 ntBASIC0.61□□□□□ -2.31
KRTCAP3Q53RY4 RNU2-51P-201ENST00000410708 197 ntBASIC0.61□□□□□ -2.31
KRTCAP3Q53RY4 SNORA31.14-201ENST00000516728 116 ntBASIC0.61□□□□□ -2.31
KRTCAP3Q53RY4 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.61□□□□□ -2.31
KRTCAP3Q53RY4 uc_338.16-201ENST00000621804 95 ntBASIC0.61□□□□□ -2.31
KRTCAP3Q53RY4 U2.22-201ENST00000636441 106 ntBASIC0.61□□□□□ -2.31
KRTCAP3Q53RY4 AL512310.12-203ENST00000640543 90 ntBASIC0.61□□□□□ -2.31
KRTCAP3Q53RY4 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
KRTCAP3Q53RY4 Y_RNA.35-201ENST00000362601 101 ntBASIC0.6□□□□□ -2.31
KRTCAP3Q53RY4 RNA5SP245-201ENST00000364239 121 ntBASIC0.6□□□□□ -2.31
KRTCAP3Q53RY4 RNY1P8-201ENST00000383970 114 ntBASIC0.6□□□□□ -2.31
KRTCAP3Q53RY4 Y_RNA.507-201ENST00000384500 99 ntBASIC0.6□□□□□ -2.31
KRTCAP3Q53RY4 RNU6-535P-201ENST00000384722 107 ntBASIC0.6□□□□□ -2.31
KRTCAP3Q53RY4 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.6□□□□□ -2.31
KRTCAP3Q53RY4 BX276092.1-201ENST00000427368 251 ntBASIC0.6□□□□□ -2.31
KRTCAP3Q53RY4 AC068339.1-201ENST00000526965 141 ntBASIC0.6□□□□□ -2.31
KRTCAP3Q53RY4 Y_RNA.32-201ENST00000362589 110 ntBASIC0.59□□□□□ -2.31
KRTCAP3Q53RY4 RNU6-1313P-201ENST00000362622 102 ntBASIC0.59□□□□□ -2.31
KRTCAP3Q53RY4 Y_RNA.205-201ENST00000364128 113 ntBASIC0.59□□□□□ -2.31
KRTCAP3Q53RY4 Y_RNA.247-201ENST00000364500 92 ntBASIC0.59□□□□□ -2.31
KRTCAP3Q53RY4 Y_RNA.281-201ENST00000364774 94 ntBASIC0.59□□□□□ -2.31
KRTCAP3Q53RY4 RNU6-476P-201ENST00000384726 107 ntBASIC0.59□□□□□ -2.31
KRTCAP3Q53RY4 MIR644A-201ENST00000385262 94 ntBASIC0.59□□□□□ -2.31
KRTCAP3Q53RY4 MIR140-201ENST00000385282 100 ntBASIC0.59□□□□□ -2.31
KRTCAP3Q53RY4 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.59□□□□□ -2.31
KRTCAP3Q53RY4 MIR1912-201ENST00000410389 80 ntBASIC0.59□□□□□ -2.31
KRTCAP3Q53RY4 RNU6-1064P-201ENST00000410626 104 ntBASIC0.59□□□□□ -2.31
KRTCAP3Q53RY4 RNU6-1018P-201ENST00000516577 106 ntBASIC0.59□□□□□ -2.31
KRTCAP3Q53RY4 RNU6-1006P-201ENST00000516998 103 ntBASIC0.59□□□□□ -2.31
KRTCAP3Q53RY4 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.59□□□□□ -2.31
KRTCAP3Q53RY4 MIR101-2-201ENST00000362195 79 ntBASIC0.58□□□□□ -2.32
KRTCAP3Q53RY4 Y_RNA.56-201ENST00000362798 112 ntBASIC0.58□□□□□ -2.32
KRTCAP3Q53RY4 Y_RNA.174-201ENST00000363781 105 ntBASIC0.58□□□□□ -2.32
KRTCAP3Q53RY4 U8.6-201ENST00000364939 135 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 274.7 ms