Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 RNU6-1044P-201ENST00000384755 107 ntBASIC-4.21□□□□□ -3.08
TFF3Q07654 HSPE1P25-201ENST00000455484 251 ntBASIC-4.21□□□□□ -3.08
TFF3Q07654 RNU6-861P-201ENST00000516745 106 ntBASIC-4.21□□□□□ -3.08
TFF3Q07654 DLEU2_5.1-201ENST00000615567 84 ntBASIC-4.21□□□□□ -3.08
TFF3Q07654 DLEU2_3.1-201ENST00000620005 73 ntBASIC-4.21□□□□□ -3.08
TFF3Q07654 Y_RNA.531-201ENST00000384589 121 ntBASIC-4.22□□□□□ -3.08
TFF3Q07654 MIR520D-201ENST00000385002 87 ntBASIC-4.22□□□□□ -3.08
TFF3Q07654 RNU6-1129P-201ENST00000515964 104 ntBASIC-4.22□□□□□ -3.08
TFF3Q07654 RNU6-518P-201ENST00000516056 96 ntBASIC-4.22□□□□□ -3.08
TFF3Q07654 RNU6-1281P-201ENST00000516223 105 ntBASIC-4.22□□□□□ -3.08
TFF3Q07654 AP002392.1-201ENST00000537692 208 ntBASIC-4.22□□□□□ -3.08
TFF3Q07654 AL133173.2-201ENST00000614270 90 ntBASIC-4.22□□□□□ -3.08
TFF3Q07654 AC006927.2-201ENST00000639256 389 ntBASIC-4.22□□□□□ -3.08
TFF3Q07654 AC073869.6-201ENST00000640656 341 ntBASIC-4.22□□□□□ -3.08
TFF3Q07654 AC024933.1-201ENST00000608472 348 ntBASIC-4.23□□□□□ -3.09
TFF3Q07654 PISRT1.1-201ENST00000616930 107 ntBASIC-4.23□□□□□ -3.09
TFF3Q07654 Y_RNA.173-201ENST00000363776 113 ntBASIC-4.24□□□□□ -3.09
TFF3Q07654 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC-4.24□□□□□ -3.09
TFF3Q07654 AL021921.1-201ENST00000442774 93 ntBASIC-4.24□□□□□ -3.09
TFF3Q07654 snoU13.17-201ENST00000458802 104 ntBASIC-4.24□□□□□ -3.09
TFF3Q07654 MTND4P7-201ENST00000523876 130 ntBASIC-4.24□□□□□ -3.09
TFF3Q07654 AC099654.13-201ENST00000639774 207 ntBASIC-4.24□□□□□ -3.09
TFF3Q07654 RNU6-413P-201ENST00000384115 107 ntBASIC-4.25□□□□□ -3.09
TFF3Q07654 Y_RNA.556-201ENST00000384677 113 ntBASIC-4.25□□□□□ -3.09
TFF3Q07654 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC-4.25□□□□□ -3.09
TFF3Q07654 RNU6-845P-201ENST00000362578 103 ntBASIC-4.26□□□□□ -3.09
TFF3Q07654 Y_RNA.291-201ENST00000364886 113 ntBASIC-4.26□□□□□ -3.09
TFF3Q07654 RNU6-517P-201ENST00000384362 110 ntBASIC-4.26□□□□□ -3.09
TFF3Q07654 Y_RNA.31-201ENST00000362574 102 ntBASIC-4.27□□□□□ -3.09
TFF3Q07654 Y_RNA.389-201ENST00000383924 113 ntBASIC-4.27□□□□□ -3.09
TFF3Q07654 RNY1P6-201ENST00000384193 109 ntBASIC-4.27□□□□□ -3.09
TFF3Q07654 SNORD38.2-201ENST00000384470 69 ntBASIC-4.27□□□□□ -3.09
TFF3Q07654 AC009779.6-201ENST00000603972 165 ntBASIC-4.27□□□□□ -3.09
TFF3Q07654 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-4.27□□□□□ -3.09
TFF3Q07654 RNU6-1301P-201ENST00000362724 104 ntBASIC-4.28□□□□□ -3.09
TFF3Q07654 RNU6-260P-201ENST00000384092 107 ntBASIC-4.28□□□□□ -3.09
TFF3Q07654 RNU6-1242P-201ENST00000391052 103 ntBASIC-4.28□□□□□ -3.09
TFF3Q07654 SNORD115-47-201ENST00000391226 86 ntBASIC-4.28□□□□□ -3.09
TFF3Q07654 SNORA19.2-201ENST00000516013 114 ntBASIC-4.28□□□□□ -3.09
TFF3Q07654 AL132765.2-201ENST00000610812 351 ntBASIC-4.28□□□□□ -3.09
TFF3Q07654 RNU6-501P-201ENST00000364072 100 ntBASIC-4.29□□□□□ -3.1
TFF3Q07654 RNU6-383P-201ENST00000410864 94 ntBASIC-4.29□□□□□ -3.1
TFF3Q07654 MTCO2P24-201ENST00000515611 426 ntBASIC-4.29□□□□□ -3.1
TFF3Q07654 RNU6-832P-201ENST00000363319 107 ntBASIC-4.3□□□□□ -3.1
TFF3Q07654 RNU6-696P-201ENST00000390834 107 ntBASIC-4.3□□□□□ -3.1
TFF3Q07654 RNU4-69P-201ENST00000410677 143 ntBASIC-4.3□□□□□ -3.1
TFF3Q07654 RBMX2P4-201ENST00000441256 376 ntBASIC-4.3□□□□□ -3.1
TFF3Q07654 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC-4.3□□□□□ -3.1
TFF3Q07654 MIR5692C2-201ENST00000577959 77 ntBASIC-4.3□□□□□ -3.1
TFF3Q07654 AL606534.2-204ENST00000635008 178 ntBASIC-4.3□□□□□ -3.1
TFF3Q07654 Y_RNA.230-201ENST00000364348 109 ntBASIC-4.31□□□□□ -3.1
TFF3Q07654 Y_RNA.299-201ENST00000364973 94 ntBASIC-4.31□□□□□ -3.1
TFF3Q07654 RNU6-308P-201ENST00000390957 107 ntBASIC-4.31□□□□□ -3.1
TFF3Q07654 AC073415.1-201ENST00000449240 153 ntBASIC-4.31□□□□□ -3.1
TFF3Q07654 FGF7P7-201ENST00000514120 227 ntBASIC-4.31□□□□□ -3.1
TFF3Q07654 RNA5SP153-201ENST00000516498 76 ntBASIC-4.31□□□□□ -3.1
TFF3Q07654 MIR4424-201ENST00000585257 86 ntBASIC-4.31□□□□□ -3.1
TFF3Q07654 RNU6-824P-201ENST00000363724 104 ntBASIC-4.32□□□□□ -3.1
TFF3Q07654 RNU6-596P-201ENST00000365395 98 ntBASIC-4.32□□□□□ -3.1
TFF3Q07654 MIR521-2-201ENST00000384818 87 ntBASIC-4.32□□□□□ -3.1
TFF3Q07654 MIR517A-201ENST00000385001 87 ntBASIC-4.32□□□□□ -3.1
TFF3Q07654 RNU6-519P-201ENST00000410590 108 ntBASIC-4.32□□□□□ -3.1
TFF3Q07654 RNU7-87P-201ENST00000459343 62 ntBASIC-4.32□□□□□ -3.1
TFF3Q07654 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-4.32□□□□□ -3.1
TFF3Q07654 MIR548AG1-201ENST00000579932 66 ntBASIC-4.32□□□□□ -3.1
TFF3Q07654 MIR3942-201ENST00000585264 109 ntBASIC-4.32□□□□□ -3.1
TFF3Q07654 RNU6-899P-201ENST00000363947 107 ntBASIC-4.33□□□□□ -3.1
TFF3Q07654 RNU6-132P-201ENST00000383863 107 ntBASIC-4.33□□□□□ -3.1
TFF3Q07654 AL353193.1-201ENST00000421444 268 ntBASIC-4.33□□□□□ -3.1
TFF3Q07654 DEFB117-201ENST00000602356 141 ntBASIC-4.33□□□□□ -3.1
TFF3Q07654 AC092747.3-201ENST00000603769 301 ntBASIC-4.33□□□□□ -3.1
TFF3Q07654 MIRLET7A3-201ENST00000362116 74 ntBASIC-4.34□□□□□ -3.1
TFF3Q07654 RNU6-1277P-201ENST00000364561 107 ntBASIC-4.34□□□□□ -3.1
TFF3Q07654 RNU6-728P-201ENST00000365375 104 ntBASIC-4.34□□□□□ -3.1
TFF3Q07654 MIR34C-201ENST00000384831 77 ntBASIC-4.34□□□□□ -3.1
TFF3Q07654 RNU2-55P-201ENST00000411146 174 ntBASIC-4.34□□□□□ -3.1
TFF3Q07654 RNU6-1234P-201ENST00000516877 103 ntBASIC-4.34□□□□□ -3.1
TFF3Q07654 MIR5701-3-201ENST00000578890 82 ntBASIC-4.34□□□□□ -3.1
TFF3Q07654 MIR5701-1-201ENST00000585138 82 ntBASIC-4.34□□□□□ -3.1
TFF3Q07654 MIR5701-2-201ENST00000615634 82 ntBASIC-4.34□□□□□ -3.1
TFF3Q07654 MIRLET7A2-201ENST00000362105 72 ntBASIC-4.35□□□□□ -3.11
TFF3Q07654 RNU6-1205P-201ENST00000363625 106 ntBASIC-4.35□□□□□ -3.11
TFF3Q07654 RNU1-115P-201ENST00000365329 160 ntBASIC-4.35□□□□□ -3.11
TFF3Q07654 AL356010.1-201ENST00000456364 102 ntBASIC-4.35□□□□□ -3.11
TFF3Q07654 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC-4.35□□□□□ -3.11
TFF3Q07654 SCARNA15-202ENST00000516881 127 ntBASIC-4.35□□□□□ -3.11
TFF3Q07654 AC084782.3-201ENST00000612282 578 ntBASIC-4.35□□□□□ -3.11
TFF3Q07654 SNORA63.2-201ENST00000362603 126 ntBASIC-4.36□□□□□ -3.11
TFF3Q07654 RNU6-1128P-201ENST00000362825 109 ntBASIC-4.36□□□□□ -3.11
TFF3Q07654 Y_RNA.509-201ENST00000384506 99 ntBASIC-4.36□□□□□ -3.11
TFF3Q07654 SNORD77B-201ENST00000391112 67 ntBASIC-4.36□□□□□ -3.11
TFF3Q07654 MTATP6P21-201ENST00000440681 189 ntBASIC-4.36□□□□□ -3.11
TFF3Q07654 AC083798.1-201ENST00000472671 131 ntBASIC-4.36□□□□□ -3.11
TFF3Q07654 RNA5SP147-201ENST00000516493 109 ntBASIC-4.36□□□□□ -3.11
TFF3Q07654 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-4.36□□□□□ -3.11
TFF3Q07654 Z84480.1-201ENST00000605131 311 ntBASIC-4.36□□□□□ -3.11
TFF3Q07654 RNU6-626P-201ENST00000363354 107 ntBASIC-4.37□□□□□ -3.11
TFF3Q07654 RNU6-1299P-201ENST00000516316 100 ntBASIC-4.37□□□□□ -3.11
TFF3Q07654 SCARNA24.2-201ENST00000516968 130 ntBASIC-4.37□□□□□ -3.11
TFF3Q07654 MIR2355-201ENST00000517199 87 ntBASIC-4.37□□□□□ -3.11
Retrieved 100 of 98,524 protein–RNA pairs in 229.7 ms