Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 RNU6-1022P-201ENST00000365049 104 ntBASIC1.75□□□□□ -2.13
YBX1P67809 RPL30P7-201ENST00000479312 323 ntBASIC1.75□□□□□ -2.13
YBX1P67809 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.75□□□□□ -2.13
YBX1P67809 uc_338.6-201ENST00000613544 171 ntBASIC1.75□□□□□ -2.13
YBX1P67809 SNORA16.1-201ENST00000364597 132 ntBASIC1.74□□□□□ -2.13
YBX1P67809 MT-TF-201ENST00000387314 71 ntBASIC1.74□□□□□ -2.13
YBX1P67809 SNORA17.3-201ENST00000391159 129 ntBASIC1.74□□□□□ -2.13
YBX1P67809 MIR934-201ENST00000401241 83 ntBASIC1.74□□□□□ -2.13
YBX1P67809 MIR1185-1-201ENST00000408598 86 ntBASIC1.74□□□□□ -2.13
YBX1P67809 RNA5SP95-201ENST00000410319 137 ntBASIC1.74□□□□□ -2.13
YBX1P67809 snoU13.9-201ENST00000458927 103 ntBASIC1.74□□□□□ -2.13
YBX1P67809 RNU11-2P-201ENST00000516898 142 ntBASIC1.74□□□□□ -2.13
YBX1P67809 MIR4419B-201ENST00000577260 68 ntBASIC1.74□□□□□ -2.13
YBX1P67809 MIR4712-201ENST00000583750 82 ntBASIC1.74□□□□□ -2.13
YBX1P67809 AC103810.8-201ENST00000607347 118 ntBASIC1.74□□□□□ -2.13
YBX1P67809 RNA5SP264-201ENST00000363115 107 ntBASIC1.73□□□□□ -2.13
YBX1P67809 RNU6-654P-201ENST00000364373 107 ntBASIC1.73□□□□□ -2.13
YBX1P67809 SNORA72.6-201ENST00000384520 129 ntBASIC1.73□□□□□ -2.13
YBX1P67809 MIR889-201ENST00000401280 79 ntBASIC1.73□□□□□ -2.13
YBX1P67809 SNORD93-201ENST00000408813 74 ntBASIC1.73□□□□□ -2.13
YBX1P67809 RNU7-85P-201ENST00000458851 63 ntBASIC1.73□□□□□ -2.13
YBX1P67809 Y_RNA.648-201ENST00000459455 110 ntBASIC1.73□□□□□ -2.13
YBX1P67809 SNORA25.13-201ENST00000516395 103 ntBASIC1.73□□□□□ -2.13
YBX1P67809 AP003716.2-201ENST00000528260 108 ntBASIC1.73□□□□□ -2.13
YBX1P67809 RNU6-53P-201ENST00000365367 106 ntBASIC1.72□□□□□ -2.13
YBX1P67809 MIR516A2-201ENST00000384888 90 ntBASIC1.72□□□□□ -2.13
YBX1P67809 MIR516A1-201ENST00000385033 90 ntBASIC1.72□□□□□ -2.13
YBX1P67809 RNU6-531P-201ENST00000516694 104 ntBASIC1.72□□□□□ -2.13
YBX1P67809 AC019176.1-201ENST00000518519 225 ntBASIC1.72□□□□□ -2.13
YBX1P67809 MIR4491-201ENST00000581087 68 ntBASIC1.72□□□□□ -2.13
YBX1P67809 AC084768.2-201ENST00000622736 221 ntBASIC1.72□□□□□ -2.13
YBX1P67809 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
YBX1P67809 AC008163.1-202ENST00000636004 2889 ntBASIC1.72□□□□□ -2.13
YBX1P67809 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.71□□□□□ -2.13
YBX1P67809 RNU4-58P-201ENST00000363192 141 ntBASIC1.71□□□□□ -2.14
YBX1P67809 Y_RNA.224-201ENST00000364308 111 ntBASIC1.71□□□□□ -2.14
YBX1P67809 RNU6-243P-201ENST00000391140 107 ntBASIC1.71□□□□□ -2.14
YBX1P67809 snoU13.11-201ENST00000459219 104 ntBASIC1.71□□□□□ -2.14
YBX1P67809 AC005908.1-201ENST00000468701 347 ntBASIC1.71□□□□□ -2.14
YBX1P67809 SNORA25.16-201ENST00000516741 121 ntBASIC1.71□□□□□ -2.14
YBX1P67809 MIR4536-1-201ENST00000583537 88 ntBASIC1.71□□□□□ -2.14
YBX1P67809 AC012493.3-201ENST00000604494 112 ntBASIC1.71□□□□□ -2.14
YBX1P67809 MIR377-201ENST00000362145 69 ntBASIC1.7□□□□□ -2.14
YBX1P67809 RNU6-403P-201ENST00000363163 104 ntBASIC1.7□□□□□ -2.14
YBX1P67809 RNU6-129P-201ENST00000391022 107 ntBASIC1.7□□□□□ -2.14
YBX1P67809 RNU6-1254P-201ENST00000391266 104 ntBASIC1.7□□□□□ -2.14
YBX1P67809 AP1B1P2-201ENST00000416196 106 ntBASIC1.7□□□□□ -2.14
YBX1P67809 RNU6-65P-201ENST00000516332 98 ntBASIC1.7□□□□□ -2.14
YBX1P67809 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.7□□□□□ -2.14
YBX1P67809 MIR4422-201ENST00000581938 83 ntBASIC1.7□□□□□ -2.14
YBX1P67809 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
YBX1P67809 SNORD36A-201ENST00000362874 73 ntBASIC1.69□□□□□ -2.14
YBX1P67809 SNORD1A-201ENST00000364968 72 ntBASIC1.69□□□□□ -2.14
YBX1P67809 MIR18B-201ENST00000454574 71 ntBASIC1.69□□□□□ -2.14
YBX1P67809 AC079140.2-201ENST00000506193 142 ntBASIC1.69□□□□□ -2.14
YBX1P67809 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.69□□□□□ -2.14
YBX1P67809 RNU1-36P-201ENST00000365130 165 ntBASIC1.68□□□□□ -2.14
YBX1P67809 RNA5SP190-201ENST00000365222 118 ntBASIC1.68□□□□□ -2.14
YBX1P67809 SNORA67.5-201ENST00000391036 107 ntBASIC1.68□□□□□ -2.14
YBX1P67809 Y_RNA.588-201ENST00000391254 102 ntBASIC1.68□□□□□ -2.14
YBX1P67809 AL450471.1-201ENST00000447509 127 ntBASIC1.68□□□□□ -2.14
YBX1P67809 MIR3937-201ENST00000580135 106 ntBASIC1.68□□□□□ -2.14
YBX1P67809 RNU6-315P-201ENST00000362666 107 ntBASIC1.67□□□□□ -2.14
YBX1P67809 RNA5SP363-201ENST00000365072 115 ntBASIC1.67□□□□□ -2.14
YBX1P67809 RNU6-580P-201ENST00000365159 107 ntBASIC1.67□□□□□ -2.14
YBX1P67809 RNU6-811P-201ENST00000384069 107 ntBASIC1.67□□□□□ -2.14
YBX1P67809 RNU6-1065P-201ENST00000384513 106 ntBASIC1.67□□□□□ -2.14
YBX1P67809 RNU7-106P-201ENST00000459514 67 ntBASIC1.67□□□□□ -2.14
YBX1P67809 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.67□□□□□ -2.14
YBX1P67809 MIR4796-201ENST00000580742 81 ntBASIC1.67□□□□□ -2.14
YBX1P67809 AC023934.1-201ENST00000574529 2389 ntBASIC1.66□□□□□ -2.14
YBX1P67809 MIR302D-201ENST00000362275 68 ntBASIC1.66□□□□□ -2.14
YBX1P67809 Y_RNA.540-201ENST00000384638 111 ntBASIC1.66□□□□□ -2.14
YBX1P67809 AC073261.1-201ENST00000429409 121 ntBASIC1.66□□□□□ -2.14
YBX1P67809 SNORA25.15-201ENST00000516487 89 ntBASIC1.66□□□□□ -2.14
YBX1P67809 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
YBX1P67809 MIR101-2-201ENST00000362195 79 ntBASIC1.65□□□□□ -2.15
YBX1P67809 RNU6-478P-201ENST00000363904 110 ntBASIC1.65□□□□□ -2.15
YBX1P67809 Y_RNA.330-201ENST00000365230 109 ntBASIC1.65□□□□□ -2.15
YBX1P67809 RNU6-466P-201ENST00000391224 103 ntBASIC1.65□□□□□ -2.15
YBX1P67809 RNU1-78P-201ENST00000391248 165 ntBASIC1.65□□□□□ -2.15
YBX1P67809 SNORD63B-201ENST00000411005 70 ntBASIC1.65□□□□□ -2.15
YBX1P67809 MIR3664-201ENST00000579074 99 ntBASIC1.65□□□□□ -2.15
YBX1P67809 MIR6504-201ENST00000613520 61 ntBASIC1.65□□□□□ -2.15
YBX1P67809 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
YBX1P67809 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.65□□□□□ -2.15
YBX1P67809 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
YBX1P67809 RNU6-1094P-201ENST00000362416 104 ntBASIC1.64□□□□□ -2.15
YBX1P67809 RNU6-624P-201ENST00000363411 107 ntBASIC1.64□□□□□ -2.15
YBX1P67809 Y_RNA.283-201ENST00000364798 112 ntBASIC1.64□□□□□ -2.15
YBX1P67809 RNU7-185P-201ENST00000459215 60 ntBASIC1.64□□□□□ -2.15
YBX1P67809 snoU13.21-201ENST00000459368 105 ntBASIC1.64□□□□□ -2.15
YBX1P67809 AC013244.2-201ENST00000603396 103 ntBASIC1.64□□□□□ -2.15
YBX1P67809 AC145423.2-201ENST00000610631 239 ntBASIC1.64□□□□□ -2.15
YBX1P67809 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.64□□□□□ -2.15
YBX1P67809 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
YBX1P67809 RNU6-42P-201ENST00000384165 107 ntBASIC1.63□□□□□ -2.15
YBX1P67809 MIR635-201ENST00000384830 98 ntBASIC1.63□□□□□ -2.15
YBX1P67809 RNA5SP292-201ENST00000390974 118 ntBASIC1.63□□□□□ -2.15
YBX1P67809 MIR1257-201ENST00000408490 117 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 196.5 ms