Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 AC008267.6-201ENST00000441664 139 ntBASIC0.68□□□□□ -2.3
CENPAP49450 RNU6-469P-201ENST00000516253 101 ntBASIC0.68□□□□□ -2.3
CENPAP49450 MIR5000-201ENST00000577717 103 ntBASIC0.68□□□□□ -2.3
CENPAP49450 Y_RNA.507-201ENST00000384500 99 ntBASIC0.67□□□□□ -2.3
CENPAP49450 SNORD33.1-201ENST00000516213 88 ntBASIC0.67□□□□□ -2.3
CENPAP49450 Y_RNA.155-201ENST00000363632 101 ntBASIC0.66□□□□□ -2.3
CENPAP49450 RNU4-67P-201ENST00000364569 141 ntBASIC0.66□□□□□ -2.3
CENPAP49450 Y_RNA.362-201ENST00000365518 110 ntBASIC0.66□□□□□ -2.3
CENPAP49450 RNU6-429P-201ENST00000384582 108 ntBASIC0.66□□□□□ -2.3
CENPAP49450 RNU6-291P-201ENST00000384720 107 ntBASIC0.66□□□□□ -2.3
CENPAP49450 MIR548A1-201ENST00000385041 97 ntBASIC0.66□□□□□ -2.3
CENPAP49450 RNU6-679P-201ENST00000391003 106 ntBASIC0.66□□□□□ -2.3
CENPAP49450 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.66□□□□□ -2.3
CENPAP49450 CYP3A137P-201ENST00000562436 69 ntBASIC0.66□□□□□ -2.3
CENPAP49450 AC007012.1-201ENST00000567192 175 ntBASIC0.66□□□□□ -2.3
CENPAP49450 MIR376B-201ENST00000614515 100 ntBASIC0.66□□□□□ -2.3
CENPAP49450 AL512310.12-203ENST00000640543 90 ntBASIC0.66□□□□□ -2.3
CENPAP49450 Y_RNA.261-201ENST00000364631 102 ntBASIC0.65□□□□□ -2.31
CENPAP49450 RNU6-1117P-201ENST00000384525 104 ntBASIC0.65□□□□□ -2.31
CENPAP49450 MIR140-201ENST00000385282 100 ntBASIC0.65□□□□□ -2.31
CENPAP49450 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
CENPAP49450 RNU6-62P-201ENST00000516526 102 ntBASIC0.65□□□□□ -2.31
CENPAP49450 SNORA31.14-201ENST00000516728 116 ntBASIC0.65□□□□□ -2.31
CENPAP49450 AL670379.3-201ENST00000605040 251 ntBASIC0.65□□□□□ -2.31
CENPAP49450 AL365222.1-201ENST00000614661 98 ntBASIC0.65□□□□□ -2.31
CENPAP49450 Y_RNA.32-201ENST00000362589 110 ntBASIC0.64□□□□□ -2.31
CENPAP49450 RNU6-363P-201ENST00000362895 105 ntBASIC0.64□□□□□ -2.31
CENPAP49450 Y_RNA.174-201ENST00000363781 105 ntBASIC0.64□□□□□ -2.31
CENPAP49450 RNU6-409P-201ENST00000384114 104 ntBASIC0.64□□□□□ -2.31
CENPAP49450 MIR34C-201ENST00000384831 77 ntBASIC0.64□□□□□ -2.31
CENPAP49450 MIR644A-201ENST00000385262 94 ntBASIC0.64□□□□□ -2.31
CENPAP49450 RNU6-816P-201ENST00000390914 107 ntBASIC0.64□□□□□ -2.31
CENPAP49450 RNU6-1268P-201ENST00000391214 107 ntBASIC0.64□□□□□ -2.31
CENPAP49450 RNU6-1239P-201ENST00000391310 107 ntBASIC0.64□□□□□ -2.31
CENPAP49450 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.64□□□□□ -2.31
CENPAP49450 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.64□□□□□ -2.31
CENPAP49450 MIR3678-201ENST00000578455 94 ntBASIC0.64□□□□□ -2.31
CENPAP49450 MIR6835-201ENST00000621552 64 ntBASIC0.64□□□□□ -2.31
CENPAP49450 SNORA63.5-201ENST00000363548 123 ntBASIC0.63□□□□□ -2.31
CENPAP49450 Y_RNA.360-201ENST00000365512 102 ntBASIC0.63□□□□□ -2.31
CENPAP49450 SNORD38.2-201ENST00000384470 69 ntBASIC0.63□□□□□ -2.31
CENPAP49450 MIR548H5-201ENST00000580314 60 ntBASIC0.63□□□□□ -2.31
CENPAP49450 uc_338.16-201ENST00000621804 95 ntBASIC0.63□□□□□ -2.31
CENPAP49450 Y_RNA.56-201ENST00000362798 112 ntBASIC0.62□□□□□ -2.31
CENPAP49450 RNU4-61P-201ENST00000411243 107 ntBASIC0.62□□□□□ -2.31
CENPAP49450 BX276092.1-201ENST00000427368 251 ntBASIC0.62□□□□□ -2.31
CENPAP49450 RPL39P34-201ENST00000477141 156 ntBASIC0.62□□□□□ -2.31
CENPAP49450 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.62□□□□□ -2.31
CENPAP49450 AL590095.2-201ENST00000604136 117 ntBASIC0.62□□□□□ -2.31
CENPAP49450 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.62□□□□□ -2.31
CENPAP49450 AL162726.3-218ENST00000636401 95 ntBASIC0.62□□□□□ -2.31
CENPAP49450 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
CENPAP49450 Y_RNA.36-201ENST00000362602 112 ntBASIC0.61□□□□□ -2.31
CENPAP49450 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.61□□□□□ -2.31
CENPAP49450 MIR1912-201ENST00000410389 80 ntBASIC0.61□□□□□ -2.31
CENPAP49450 RNA5SP121-201ENST00000516537 101 ntBASIC0.61□□□□□ -2.31
CENPAP49450 MTND5P40-201ENST00000559945 246 ntBASIC0.61□□□□□ -2.31
CENPAP49450 RNU7-10P-201ENST00000607194 63 ntBASIC0.61□□□□□ -2.31
CENPAP49450 uc_338.17-201ENST00000619633 179 ntBASIC0.61□□□□□ -2.31
CENPAP49450 AL035470.1-201ENST00000622571 220 ntBASIC0.61□□□□□ -2.31
CENPAP49450 Y_RNA.85-201ENST00000363014 111 ntBASIC0.6□□□□□ -2.31
CENPAP49450 Y_RNA.309-201ENST00000365046 111 ntBASIC0.6□□□□□ -2.31
CENPAP49450 Y_RNA.353-201ENST00000365440 108 ntBASIC0.6□□□□□ -2.31
CENPAP49450 RNU6-945P-201ENST00000383947 107 ntBASIC0.6□□□□□ -2.31
CENPAP49450 RNU6-22P-201ENST00000384355 107 ntBASIC0.6□□□□□ -2.31
CENPAP49450 MIR508-201ENST00000384857 115 ntBASIC0.6□□□□□ -2.31
CENPAP49450 RNU6-789P-201ENST00000517105 102 ntBASIC0.6□□□□□ -2.31
CENPAP49450 MIR4679-2-201ENST00000578358 77 ntBASIC0.6□□□□□ -2.31
CENPAP49450 RNA5SP245-201ENST00000364239 121 ntBASIC0.59□□□□□ -2.31
CENPAP49450 RNU6-1229P-201ENST00000364295 107 ntBASIC0.59□□□□□ -2.31
CENPAP49450 Y_RNA.549-201ENST00000384657 102 ntBASIC0.59□□□□□ -2.31
CENPAP49450 Y_RNA.567-201ENST00000384736 106 ntBASIC0.59□□□□□ -2.31
CENPAP49450 MIR635-201ENST00000384830 98 ntBASIC0.59□□□□□ -2.31
CENPAP49450 RNU6-1154P-201ENST00000391001 104 ntBASIC0.59□□□□□ -2.31
CENPAP49450 RNU6-135P-201ENST00000516769 101 ntBASIC0.59□□□□□ -2.31
CENPAP49450 MIR6779-201ENST00000617283 64 ntBASIC0.59□□□□□ -2.31
CENPAP49450 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.59□□□□□ -2.31
CENPAP49450 AC092634.7-201ENST00000621022 103 ntBASIC0.59□□□□□ -2.31
CENPAP49450 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.59□□□□□ -2.31
CENPAP49450 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.58□□□□□ -2.32
CENPAP49450 AL606753.1-201ENST00000427435 87 ntBASIC0.58□□□□□ -2.32
CENPAP49450 AC092628.1-201ENST00000436250 252 ntBASIC0.58□□□□□ -2.32
CENPAP49450 SPINT5P-201ENST00000448174 155 ntBASIC0.58□□□□□ -2.32
CENPAP49450 RNU4-54P-201ENST00000516428 129 ntBASIC0.58□□□□□ -2.32
CENPAP49450 RNA5SP94-201ENST00000516917 108 ntBASIC0.58□□□□□ -2.32
CENPAP49450 AC138907.6-201ENST00000568401 126 ntBASIC0.58□□□□□ -2.32
CENPAP49450 AC138869.1-201ENST00000568623 124 ntBASIC0.58□□□□□ -2.32
CENPAP49450 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.58□□□□□ -2.32
CENPAP49450 RNU6-1313P-201ENST00000362622 102 ntBASIC0.57□□□□□ -2.32
CENPAP49450 SNORD116-21-201ENST00000384507 92 ntBASIC0.57□□□□□ -2.32
CENPAP49450 Y_RNA.563-201ENST00000384707 108 ntBASIC0.57□□□□□ -2.32
CENPAP49450 RNU6-1168P-201ENST00000390831 104 ntBASIC0.57□□□□□ -2.32
CENPAP49450 MIR548I2-201ENST00000408348 149 ntBASIC0.57□□□□□ -2.32
CENPAP49450 RNU6-313P-201ENST00000516317 112 ntBASIC0.57□□□□□ -2.32
CENPAP49450 RNU6-1018P-201ENST00000516577 106 ntBASIC0.57□□□□□ -2.32
CENPAP49450 RN7SL793P-201ENST00000583259 296 ntBASIC0.57□□□□□ -2.32
CENPAP49450 Y_RNA.49-201ENST00000362714 112 ntBASIC0.56□□□□□ -2.32
CENPAP49450 SNORD18A-201ENST00000363753 72 ntBASIC0.56□□□□□ -2.32
CENPAP49450 RNU6-880P-201ENST00000384526 107 ntBASIC0.56□□□□□ -2.32
CENPAP49450 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 404.8 ms