Protein–RNA interactions for Protein: P12111

COL6A3, Collagen alpha-3(VI) chain, humanhuman

Predictions only

Length 3,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3P12111 RNU6-413P-201ENST00000384115 107 ntBASIC-1.11□□□□□ -2.59
COL6A3P12111 Y_RNA.441-201ENST00000384123 112 ntBASIC-1.11□□□□□ -2.59
COL6A3P12111 RNY1P6-201ENST00000384193 109 ntBASIC-1.11□□□□□ -2.59
COL6A3P12111 AC024067.1-201ENST00000426199 223 ntBASIC-1.11□□□□□ -2.59
COL6A3P12111 MIR4424-201ENST00000585257 86 ntBASIC-1.11□□□□□ -2.59
COL6A3P12111 Y_RNA.98-201ENST00000363109 102 ntBASIC-1.11□□□□□ -2.59
COL6A3P12111 RNU6-1205P-201ENST00000363625 106 ntBASIC-1.11□□□□□ -2.59
COL6A3P12111 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.11□□□□□ -2.59
COL6A3P12111 RNU6-1044P-201ENST00000384755 107 ntBASIC-1.11□□□□□ -2.59
COL6A3P12111 MIR203A-201ENST00000384836 110 ntBASIC-1.11□□□□□ -2.59
COL6A3P12111 Y_RNA.622-201ENST00000411091 108 ntBASIC-1.11□□□□□ -2.59
COL6A3P12111 AL033528.1-201ENST00000453780 140 ntBASIC-1.11□□□□□ -2.59
COL6A3P12111 MIR3672-201ENST00000584290 82 ntBASIC-1.11□□□□□ -2.59
COL6A3P12111 AC006006.1-201ENST00000603082 144 ntBASIC-1.11□□□□□ -2.59
COL6A3P12111 AC013791.1-201ENST00000616619 62 ntBASIC-1.11□□□□□ -2.59
COL6A3P12111 AC006927.3-201ENST00000638789 384 ntBASIC-1.11□□□□□ -2.59
COL6A3P12111 Y_RNA.97-201ENST00000363094 102 ntBASIC-1.12□□□□□ -2.59
COL6A3P12111 Y_RNA.159-201ENST00000363674 87 ntBASIC-1.12□□□□□ -2.59
COL6A3P12111 RNU6-990P-201ENST00000364385 104 ntBASIC-1.12□□□□□ -2.59
COL6A3P12111 RNU6-1103P-201ENST00000384150 107 ntBASIC-1.12□□□□□ -2.59
COL6A3P12111 SNORD78.2-201ENST00000391076 69 ntBASIC-1.12□□□□□ -2.59
COL6A3P12111 MIR5692C2-201ENST00000577959 77 ntBASIC-1.12□□□□□ -2.59
COL6A3P12111 RNU6-90P-201ENST00000606352 106 ntBASIC-1.12□□□□□ -2.59
COL6A3P12111 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.12□□□□□ -2.59
COL6A3P12111 RNU6-845P-201ENST00000362578 103 ntBASIC-1.12□□□□□ -2.59
COL6A3P12111 RNU6-472P-201ENST00000384299 107 ntBASIC-1.12□□□□□ -2.59
COL6A3P12111 RNU6-95P-201ENST00000384697 107 ntBASIC-1.12□□□□□ -2.59
COL6A3P12111 U3.27-201ENST00000391237 200 ntBASIC-1.12□□□□□ -2.59
COL6A3P12111 RNU6-630P-201ENST00000391258 106 ntBASIC-1.12□□□□□ -2.59
COL6A3P12111 snoU13.10-201ENST00000459301 103 ntBASIC-1.12□□□□□ -2.59
COL6A3P12111 RNU6-75P-201ENST00000515944 104 ntBASIC-1.12□□□□□ -2.59
COL6A3P12111 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-1.12□□□□□ -2.59
COL6A3P12111 MIR6739-201ENST00000622461 75 ntBASIC-1.12□□□□□ -2.59
COL6A3P12111 RNU6-1120P-201ENST00000362988 108 ntBASIC-1.12□□□□□ -2.59
COL6A3P12111 RNU6-458P-201ENST00000384179 107 ntBASIC-1.12□□□□□ -2.59
COL6A3P12111 Y_RNA.463-201ENST00000384271 102 ntBASIC-1.12□□□□□ -2.59
COL6A3P12111 MIR548Q-201ENST00000408404 100 ntBASIC-1.12□□□□□ -2.59
COL6A3P12111 RNU6-1156P-201ENST00000410365 100 ntBASIC-1.12□□□□□ -2.59
COL6A3P12111 MTCO2P24-201ENST00000515611 426 ntBASIC-1.12□□□□□ -2.59
COL6A3P12111 RNU6-453P-201ENST00000516819 85 ntBASIC-1.12□□□□□ -2.59
COL6A3P12111 Y_RNA.721-201ENST00000517207 102 ntBASIC-1.12□□□□□ -2.59
COL6A3P12111 AL021368.1-201ENST00000607490 540 ntBASIC-1.12□□□□□ -2.59
COL6A3P12111 U6.58-201ENST00000613107 107 ntBASIC-1.12□□□□□ -2.59
COL6A3P12111 AP000720.1-201ENST00000625091 483 ntBASIC-1.12□□□□□ -2.59
COL6A3P12111 RNU6-978P-201ENST00000364371 103 ntBASIC-1.13□□□□□ -2.59
COL6A3P12111 RPL35AP4-201ENST00000412007 102 ntBASIC-1.13□□□□□ -2.59
COL6A3P12111 SNORD42A-201ENST00000459584 64 ntBASIC-1.13□□□□□ -2.59
COL6A3P12111 RNU7-2P-201ENST00000516096 62 ntBASIC-1.13□□□□□ -2.59
COL6A3P12111 Y_RNA.709-201ENST00000516952 92 ntBASIC-1.13□□□□□ -2.59
COL6A3P12111 MIR1244-1-201ENST00000612829 85 ntBASIC-1.13□□□□□ -2.59
COL6A3P12111 MIR376B-201ENST00000614515 100 ntBASIC-1.13□□□□□ -2.59
COL6A3P12111 FTX_4.1-201ENST00000616291 147 ntBASIC-1.13□□□□□ -2.59
COL6A3P12111 MIR1244-3-201ENST00000635744 85 ntBASIC-1.13□□□□□ -2.59
COL6A3P12111 MIR1244-2-201ENST00000636449 85 ntBASIC-1.13□□□□□ -2.59
COL6A3P12111 MIR1244-4-202ENST00000636813 85 ntBASIC-1.13□□□□□ -2.59
COL6A3P12111 SNORD114-13-201ENST00000364377 74 ntBASIC-1.13□□□□□ -2.59
COL6A3P12111 Y_RNA.248-201ENST00000364501 109 ntBASIC-1.13□□□□□ -2.59
COL6A3P12111 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.13□□□□□ -2.59
COL6A3P12111 AL356010.1-201ENST00000456364 102 ntBASIC-1.13□□□□□ -2.59
COL6A3P12111 MTND2P31-201ENST00000512602 616 ntBASIC-1.13□□□□□ -2.59
COL6A3P12111 TPTEP1-208ENST00000636884 213 ntBASIC-1.13□□□□□ -2.59
COL6A3P12111 RNU6-957P-201ENST00000363652 99 ntBASIC-1.14□□□□□ -2.59
COL6A3P12111 RNU6-157P-201ENST00000383957 107 ntBASIC-1.14□□□□□ -2.59
COL6A3P12111 SNORD63-201ENST00000384262 68 ntBASIC-1.14□□□□□ -2.59
COL6A3P12111 AF228730.3-201ENST00000436691 102 ntBASIC-1.14□□□□□ -2.59
COL6A3P12111 HSPE1P25-201ENST00000455484 251 ntBASIC-1.14□□□□□ -2.59
COL6A3P12111 AC083798.1-201ENST00000472671 131 ntBASIC-1.14□□□□□ -2.59
COL6A3P12111 RNU2-35P-201ENST00000516446 142 ntBASIC-1.14□□□□□ -2.59
COL6A3P12111 RNU6-1038P-201ENST00000516516 104 ntBASIC-1.14□□□□□ -2.59
COL6A3P12111 AL365205.2-201ENST00000594586 68 ntBASIC-1.14□□□□□ -2.59
COL6A3P12111 AC006386.1-201ENST00000619436 415 ntBASIC-1.14□□□□□ -2.59
COL6A3P12111 SNORA63.2-201ENST00000362603 126 ntBASIC-1.14□□□□□ -2.59
COL6A3P12111 Y_RNA.80-201ENST00000362996 102 ntBASIC-1.14□□□□□ -2.59
COL6A3P12111 Y_RNA.144-201ENST00000363521 113 ntBASIC-1.14□□□□□ -2.59
COL6A3P12111 RNU7-154P-201ENST00000516194 62 ntBASIC-1.14□□□□□ -2.59
COL6A3P12111 Y_RNA.701-201ENST00000516812 110 ntBASIC-1.14□□□□□ -2.59
COL6A3P12111 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-1.14□□□□□ -2.59
COL6A3P12111 SNORD81.1-201ENST00000363064 77 ntBASIC-1.14□□□□□ -2.59
COL6A3P12111 Y_RNA.424-201ENST00000384063 103 ntBASIC-1.14□□□□□ -2.59
COL6A3P12111 RNU6-246P-201ENST00000384702 107 ntBASIC-1.14□□□□□ -2.59
COL6A3P12111 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-1.14□□□□□ -2.59
COL6A3P12111 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-1.14□□□□□ -2.59
COL6A3P12111 AC092747.3-201ENST00000603769 301 ntBASIC-1.14□□□□□ -2.59
COL6A3P12111 MIR6509-201ENST00000614603 85 ntBASIC-1.14□□□□□ -2.59
COL6A3P12111 AL365265.1-201ENST00000621045 234 ntBASIC-1.14□□□□□ -2.59
COL6A3P12111 Y_RNA.389-201ENST00000383924 113 ntBASIC-1.15□□□□□ -2.59
COL6A3P12111 RNU6-763P-201ENST00000390865 106 ntBASIC-1.15□□□□□ -2.59
COL6A3P12111 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.15□□□□□ -2.59
COL6A3P12111 MTND4P28-201ENST00000426217 387 ntBASIC-1.15□□□□□ -2.59
COL6A3P12111 MTND1P2-201ENST00000430604 821 ntBASIC-1.15□□□□□ -2.59
COL6A3P12111 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.15□□□□□ -2.59
COL6A3P12111 AC097520.1-201ENST00000624435 385 ntBASIC-1.15□□□□□ -2.59
COL6A3P12111 Y_RNA.51-201ENST00000362725 102 ntBASIC-1.15□□□□□ -2.59
COL6A3P12111 MIR548A1-201ENST00000385041 97 ntBASIC-1.15□□□□□ -2.59
COL6A3P12111 RNU6-696P-201ENST00000390834 107 ntBASIC-1.15□□□□□ -2.59
COL6A3P12111 RNU6-1248P-201ENST00000391096 64 ntBASIC-1.15□□□□□ -2.59
COL6A3P12111 MTND2P22-201ENST00000444325 1033 ntBASIC-1.15□□□□□ -2.59
COL6A3P12111 RPS29P25-201ENST00000481709 171 ntBASIC-1.15□□□□□ -2.59
COL6A3P12111 RNA5SP153-201ENST00000516498 76 ntBASIC-1.15□□□□□ -2.59
COL6A3P12111 RNU2-4P-201ENST00000606190 192 ntBASIC-1.15□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 190.1 ms