Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.98□□□□□ -2.73
IFNA1P01562 MIR3611-201ENST00000584484 83 ntBASIC-1.98□□□□□ -2.73
IFNA1P01562 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-1.98□□□□□ -2.73
IFNA1P01562 RNU6-1272P-201ENST00000362776 107 ntBASIC-1.99□□□□□ -2.73
IFNA1P01562 RNU6-1228P-201ENST00000391014 107 ntBASIC-1.99□□□□□ -2.73
IFNA1P01562 Y_RNA.622-201ENST00000411091 108 ntBASIC-1.99□□□□□ -2.73
IFNA1P01562 MTND1P1-201ENST00000445453 368 ntBASIC-1.99□□□□□ -2.73
IFNA1P01562 SNORD63.1-201ENST00000516178 80 ntBASIC-1.99□□□□□ -2.73
IFNA1P01562 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-1.99□□□□□ -2.73
IFNA1P01562 AL365205.2-201ENST00000594586 68 ntBASIC-1.99□□□□□ -2.73
IFNA1P01562 Z99129.1-201ENST00000612510 255 ntBASIC-1.99□□□□□ -2.73
IFNA1P01562 RNA5SP93-201ENST00000362525 114 ntBASIC-2□□□□□ -2.73
IFNA1P01562 Y_RNA.143-201ENST00000363520 106 ntBASIC-2□□□□□ -2.73
IFNA1P01562 SNORD115-27-201ENST00000364430 82 ntBASIC-2□□□□□ -2.73
IFNA1P01562 MIR507-201ENST00000385234 94 ntBASIC-2□□□□□ -2.73
IFNA1P01562 MT-TM-201ENST00000387377 68 ntBASIC-2□□□□□ -2.73
IFNA1P01562 RNU6-510P-201ENST00000391239 108 ntBASIC-2□□□□□ -2.73
IFNA1P01562 SNRPGP8-201ENST00000454064 226 ntBASIC-2□□□□□ -2.73
IFNA1P01562 RNU7-106P-201ENST00000459514 67 ntBASIC-2□□□□□ -2.73
IFNA1P01562 Y_RNA.24-201ENST00000362508 103 ntBASIC-2.01□□□□□ -2.73
IFNA1P01562 RNA5SP405-201ENST00000363059 114 ntBASIC-2.01□□□□□ -2.73
IFNA1P01562 Y_RNA.98-201ENST00000363109 102 ntBASIC-2.01□□□□□ -2.73
IFNA1P01562 Y_RNA.103-201ENST00000363171 102 ntBASIC-2.01□□□□□ -2.73
IFNA1P01562 SCARNA17.3-201ENST00000516381 125 ntBASIC-2.01□□□□□ -2.73
IFNA1P01562 Y_RNA.713-201ENST00000517013 96 ntBASIC-2.01□□□□□ -2.73
IFNA1P01562 AP001362.1-201ENST00000625165 124 ntBASIC-2.01□□□□□ -2.73
IFNA1P01562 Y_RNA.402-201ENST00000383972 102 ntBASIC-2.02□□□□□ -2.73
IFNA1P01562 RNU6-571P-201ENST00000384128 107 ntBASIC-2.02□□□□□ -2.73
IFNA1P01562 RNY1P6-201ENST00000384193 109 ntBASIC-2.02□□□□□ -2.73
IFNA1P01562 Y_RNA.646-201ENST00000410980 101 ntBASIC-2.02□□□□□ -2.73
IFNA1P01562 AC099799.1-201ENST00000439809 192 ntBASIC-2.02□□□□□ -2.73
IFNA1P01562 SNORD54-201ENST00000459159 67 ntBASIC-2.02□□□□□ -2.73
IFNA1P01562 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC-2.02□□□□□ -2.73
IFNA1P01562 AC145350.1-201ENST00000567426 208 ntBASIC-2.02□□□□□ -2.73
IFNA1P01562 DLEU2_2.2-201ENST00000615474 90 ntBASIC-2.02□□□□□ -2.73
IFNA1P01562 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.03□□□□□ -2.73
IFNA1P01562 Y_RNA.215-201ENST00000364204 112 ntBASIC-2.03□□□□□ -2.73
IFNA1P01562 SNORD115-23-201ENST00000364461 82 ntBASIC-2.03□□□□□ -2.73
IFNA1P01562 Y_RNA.448-201ENST00000384185 108 ntBASIC-2.03□□□□□ -2.73
IFNA1P01562 AL078595.1-201ENST00000404458 226 ntBASIC-2.03□□□□□ -2.73
IFNA1P01562 SCARNA15-202ENST00000516881 127 ntBASIC-2.03□□□□□ -2.73
IFNA1P01562 RNU6-1246P-201ENST00000391064 107 ntBASIC-2.04□□□□□ -2.74
IFNA1P01562 SNORD115-33-201ENST00000363723 82 ntBASIC-2.05□□□□□ -2.74
IFNA1P01562 RNU6-890P-201ENST00000384121 107 ntBASIC-2.05□□□□□ -2.74
IFNA1P01562 RNU6-310P-201ENST00000384655 107 ntBASIC-2.05□□□□□ -2.74
IFNA1P01562 MIR4464-201ENST00000580818 92 ntBASIC-2.05□□□□□ -2.74
IFNA1P01562 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.05□□□□□ -2.74
IFNA1P01562 RNU6-358P-201ENST00000516564 75 ntBASIC-2.06□□□□□ -2.74
IFNA1P01562 Y_RNA.127-201ENST00000363386 109 ntBASIC-2.07□□□□□ -2.74
IFNA1P01562 Y_RNA.199-201ENST00000364014 102 ntBASIC-2.07□□□□□ -2.74
IFNA1P01562 Y_RNA.403-201ENST00000383977 101 ntBASIC-2.07□□□□□ -2.74
IFNA1P01562 Y_RNA.529-201ENST00000384586 119 ntBASIC-2.07□□□□□ -2.74
IFNA1P01562 MIR206-201ENST00000384872 86 ntBASIC-2.07□□□□□ -2.74
IFNA1P01562 AL731563.1-201ENST00000442202 214 ntBASIC-2.07□□□□□ -2.74
IFNA1P01562 RNU6-1149P-201ENST00000516810 97 ntBASIC-2.07□□□□□ -2.74
IFNA1P01562 RPS29P30-201ENST00000600975 111 ntBASIC-2.07□□□□□ -2.74
IFNA1P01562 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-2.07□□□□□ -2.74
IFNA1P01562 snoR1.1-201ENST00000628177 80 ntBASIC-2.07□□□□□ -2.74
IFNA1P01562 RNU6-1163P-201ENST00000364516 107 ntBASIC-2.08□□□□□ -2.74
IFNA1P01562 MIR582-201ENST00000365731 98 ntBASIC-2.08□□□□□ -2.74
IFNA1P01562 Y_RNA.526-201ENST00000384572 110 ntBASIC-2.08□□□□□ -2.74
IFNA1P01562 Y_RNA.531-201ENST00000384589 121 ntBASIC-2.08□□□□□ -2.74
IFNA1P01562 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC-2.08□□□□□ -2.74
IFNA1P01562 U8.20-201ENST00000459445 131 ntBASIC-2.08□□□□□ -2.74
IFNA1P01562 AC082651.2-201ENST00000496833 166 ntBASIC-2.08□□□□□ -2.74
IFNA1P01562 RNU6-314P-201ENST00000516574 104 ntBASIC-2.08□□□□□ -2.74
IFNA1P01562 Y_RNA.691-201ENST00000516611 103 ntBASIC-2.08□□□□□ -2.74
IFNA1P01562 AC048344.4-201ENST00000619744 527 ntBASIC-2.08□□□□□ -2.74
IFNA1P01562 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.08□□□□□ -2.74
IFNA1P01562 Y_RNA.89-201ENST00000363031 102 ntBASIC-2.09□□□□□ -2.74
IFNA1P01562 Y_RNA.175-201ENST00000363794 111 ntBASIC-2.09□□□□□ -2.74
IFNA1P01562 Y_RNA.342-201ENST00000365352 113 ntBASIC-2.09□□□□□ -2.74
IFNA1P01562 Y_RNA.421-201ENST00000384052 101 ntBASIC-2.09□□□□□ -2.74
IFNA1P01562 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-2.09□□□□□ -2.74
IFNA1P01562 MIR4272-201ENST00000635924 64 ntBASIC-2.09□□□□□ -2.74
IFNA1P01562 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-2.09□□□□□ -2.74
IFNA1P01562 RNY4P14-201ENST00000363656 96 ntBASIC-2.1□□□□□ -2.75
IFNA1P01562 Y_RNA.162-201ENST00000363683 102 ntBASIC-2.1□□□□□ -2.75
IFNA1P01562 SNORD115-22-201ENST00000364456 82 ntBASIC-2.1□□□□□ -2.75
IFNA1P01562 Y_RNA.569-201ENST00000384749 103 ntBASIC-2.1□□□□□ -2.75
IFNA1P01562 MT-TT-201ENST00000387460 66 ntBASIC-2.1□□□□□ -2.75
IFNA1P01562 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-2.1□□□□□ -2.75
IFNA1P01562 MIR1270-201ENST00000459320 83 ntBASIC-2.1□□□□□ -2.75
IFNA1P01562 RNU6-168P-201ENST00000516189 101 ntBASIC-2.1□□□□□ -2.75
IFNA1P01562 snoU2_19.2-201ENST00000363024 80 ntBASIC-2.11□□□□□ -2.75
IFNA1P01562 RNU6-194P-201ENST00000363862 105 ntBASIC-2.11□□□□□ -2.75
IFNA1P01562 Y_RNA.182-201ENST00000363880 111 ntBASIC-2.11□□□□□ -2.75
IFNA1P01562 Y_RNA.315-201ENST00000365117 102 ntBASIC-2.11□□□□□ -2.75
IFNA1P01562 RNY4P28-201ENST00000365281 93 ntBASIC-2.11□□□□□ -2.75
IFNA1P01562 MIRLET7B-201ENST00000385140 83 ntBASIC-2.11□□□□□ -2.75
IFNA1P01562 SNORA26.4-201ENST00000391188 123 ntBASIC-2.11□□□□□ -2.75
IFNA1P01562 FGF7P6-202ENST00000451282 293 ntBASIC-2.11□□□□□ -2.75
IFNA1P01562 RNU6-1188P-201ENST00000363795 107 ntBASIC-2.12□□□□□ -2.75
IFNA1P01562 MIR516A2-201ENST00000384888 90 ntBASIC-2.12□□□□□ -2.75
IFNA1P01562 MIR516A1-201ENST00000385033 90 ntBASIC-2.12□□□□□ -2.75
IFNA1P01562 Y_RNA.596-201ENST00000410462 109 ntBASIC-2.12□□□□□ -2.75
IFNA1P01562 RNU6-850P-201ENST00000516934 103 ntBASIC-2.12□□□□□ -2.75
IFNA1P01562 MIR4308-201ENST00000580634 81 ntBASIC-2.12□□□□□ -2.75
IFNA1P01562 MIR5690-201ENST00000583739 73 ntBASIC-2.12□□□□□ -2.75
IFNA1P01562 SNORD113-8-201ENST00000363497 74 ntBASIC-2.13□□□□□ -2.75
Retrieved 100 of 98,524 protein–RNA pairs in 184.2 ms