Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 MIR6740-201ENST00000618268 113 ntBASIC1.77□□□□□ -2.13
PRICKLE3O43900 SNORD41-201ENST00000386967 70 ntBASIC1.76□□□□□ -2.13
PRICKLE3O43900 RNU6-1254P-201ENST00000391266 104 ntBASIC1.76□□□□□ -2.13
PRICKLE3O43900 SUMO2P12-201ENST00000405924 140 ntBASIC1.76□□□□□ -2.13
PRICKLE3O43900 HSPE1P24-201ENST00000450782 238 ntBASIC1.76□□□□□ -2.13
PRICKLE3O43900 AC023790.1-201ENST00000482174 347 ntBASIC1.76□□□□□ -2.13
PRICKLE3O43900 RNU6-1108P-201ENST00000516308 104 ntBASIC1.76□□□□□ -2.13
PRICKLE3O43900 SNORA44.1-201ENST00000517031 108 ntBASIC1.76□□□□□ -2.13
PRICKLE3O43900 RNU6-1015P-201ENST00000517121 99 ntBASIC1.76□□□□□ -2.13
PRICKLE3O43900 MIR3064-201ENST00000581130 66 ntBASIC1.76□□□□□ -2.13
PRICKLE3O43900 MIR3192-201ENST00000584920 77 ntBASIC1.76□□□□□ -2.13
PRICKLE3O43900 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.75□□□□□ -2.13
PRICKLE3O43900 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
PRICKLE3O43900 Y_RNA.283-201ENST00000364798 112 ntBASIC1.75□□□□□ -2.13
PRICKLE3O43900 RNA5SP190-201ENST00000365222 118 ntBASIC1.75□□□□□ -2.13
PRICKLE3O43900 RNU6-132P-201ENST00000383863 107 ntBASIC1.75□□□□□ -2.13
PRICKLE3O43900 MIR516A2-201ENST00000384888 90 ntBASIC1.75□□□□□ -2.13
PRICKLE3O43900 MIR516A1-201ENST00000385033 90 ntBASIC1.75□□□□□ -2.13
PRICKLE3O43900 RNA5SP489-201ENST00000410986 109 ntBASIC1.75□□□□□ -2.13
PRICKLE3O43900 snoU13.18-201ENST00000459483 104 ntBASIC1.75□□□□□ -2.13
PRICKLE3O43900 RNU6-871P-201ENST00000516122 100 ntBASIC1.75□□□□□ -2.13
PRICKLE3O43900 SNORD111.1-201ENST00000516421 86 ntBASIC1.75□□□□□ -2.13
PRICKLE3O43900 AC104996.3-201ENST00000590718 94 ntBASIC1.75□□□□□ -2.13
PRICKLE3O43900 AL096861.1-201ENST00000610899 123 ntBASIC1.75□□□□□ -2.13
PRICKLE3O43900 uc_338.20-201ENST00000621563 178 ntBASIC1.75□□□□□ -2.13
PRICKLE3O43900 MIR1297-201ENST00000637311 77 ntBASIC1.75□□□□□ -2.13
PRICKLE3O43900 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
PRICKLE3O43900 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
PRICKLE3O43900 SNORA16.1-201ENST00000364597 132 ntBASIC1.74□□□□□ -2.13
PRICKLE3O43900 Y_RNA.264-201ENST00000364665 102 ntBASIC1.74□□□□□ -2.13
PRICKLE3O43900 RNU6-396P-201ENST00000365369 105 ntBASIC1.74□□□□□ -2.13
PRICKLE3O43900 RNU6-439P-201ENST00000384188 106 ntBASIC1.74□□□□□ -2.13
PRICKLE3O43900 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
PRICKLE3O43900 SNORD77.2-201ENST00000391045 68 ntBASIC1.74□□□□□ -2.13
PRICKLE3O43900 RNU6-1165P-201ENST00000410119 107 ntBASIC1.74□□□□□ -2.13
PRICKLE3O43900 RNU6-687P-201ENST00000516443 89 ntBASIC1.74□□□□□ -2.13
PRICKLE3O43900 RNU6-807P-201ENST00000516805 107 ntBASIC1.74□□□□□ -2.13
PRICKLE3O43900 RNU6-448P-201ENST00000517052 107 ntBASIC1.74□□□□□ -2.13
PRICKLE3O43900 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.74□□□□□ -2.13
PRICKLE3O43900 MIR4264-201ENST00000583520 66 ntBASIC1.74□□□□□ -2.13
PRICKLE3O43900 MIR8074-201ENST00000615081 81 ntBASIC1.74□□□□□ -2.13
PRICKLE3O43900 MIR30A-201ENST00000385092 71 ntBASIC1.73□□□□□ -2.13
PRICKLE3O43900 MT-TN-201ENST00000387400 73 ntBASIC1.73□□□□□ -2.13
PRICKLE3O43900 RNU6-243P-201ENST00000391140 107 ntBASIC1.73□□□□□ -2.13
PRICKLE3O43900 AP1B1P2-201ENST00000416196 106 ntBASIC1.73□□□□□ -2.13
PRICKLE3O43900 AC074348.1-201ENST00000426503 132 ntBASIC1.73□□□□□ -2.13
PRICKLE3O43900 SNORD13-201ENST00000459299 104 ntBASIC1.73□□□□□ -2.13
PRICKLE3O43900 SNORD92-201ENST00000585078 85 ntBASIC1.73□□□□□ -2.13
PRICKLE3O43900 Y_RNA.491-201ENST00000384417 107 ntBASIC1.72□□□□□ -2.13
PRICKLE3O43900 MIR635-201ENST00000384830 98 ntBASIC1.72□□□□□ -2.13
PRICKLE3O43900 MT-TF-201ENST00000387314 71 ntBASIC1.72□□□□□ -2.13
PRICKLE3O43900 MIR548U-201ENST00000390728 81 ntBASIC1.72□□□□□ -2.13
PRICKLE3O43900 RNU4-62P-201ENST00000410125 130 ntBASIC1.72□□□□□ -2.13
PRICKLE3O43900 RNU6-634P-201ENST00000459134 106 ntBASIC1.72□□□□□ -2.13
PRICKLE3O43900 RNU7-106P-201ENST00000459514 67 ntBASIC1.72□□□□□ -2.13
PRICKLE3O43900 RN7SL274P-201ENST00000492268 272 ntBASIC1.72□□□□□ -2.13
PRICKLE3O43900 AC008834.1-201ENST00000511612 175 ntBASIC1.72□□□□□ -2.13
PRICKLE3O43900 SNORA25.15-201ENST00000516487 89 ntBASIC1.72□□□□□ -2.13
PRICKLE3O43900 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.72□□□□□ -2.13
PRICKLE3O43900 MIR3198-2-201ENST00000577868 80 ntBASIC1.72□□□□□ -2.13
PRICKLE3O43900 SNORA77B-201ENST00000578179 125 ntBASIC1.72□□□□□ -2.13
PRICKLE3O43900 MIR4255-201ENST00000579351 72 ntBASIC1.72□□□□□ -2.13
PRICKLE3O43900 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
PRICKLE3O43900 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
PRICKLE3O43900 RNU5F-1-201ENST00000362507 117 ntBASIC1.71□□□□□ -2.14
PRICKLE3O43900 MIR513A1-201ENST00000385138 129 ntBASIC1.71□□□□□ -2.14
PRICKLE3O43900 JTBP1-201ENST00000441314 247 ntBASIC1.71□□□□□ -2.14
PRICKLE3O43900 RPL30P7-201ENST00000479312 323 ntBASIC1.71□□□□□ -2.14
PRICKLE3O43900 RNU6-70P-201ENST00000516438 60 ntBASIC1.71□□□□□ -2.14
PRICKLE3O43900 Y_RNA.681-201ENST00000516445 113 ntBASIC1.71□□□□□ -2.14
PRICKLE3O43900 RNU6-303P-201ENST00000517091 106 ntBASIC1.71□□□□□ -2.14
PRICKLE3O43900 AP003716.2-201ENST00000528260 108 ntBASIC1.71□□□□□ -2.14
PRICKLE3O43900 MIR4419B-201ENST00000577260 68 ntBASIC1.71□□□□□ -2.14
PRICKLE3O43900 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
PRICKLE3O43900 RNU6-208P-201ENST00000362431 107 ntBASIC1.7□□□□□ -2.14
PRICKLE3O43900 RNA5SP259-201ENST00000365541 109 ntBASIC1.7□□□□□ -2.14
PRICKLE3O43900 RNU6-466P-201ENST00000391224 103 ntBASIC1.7□□□□□ -2.14
PRICKLE3O43900 MIR1265-201ENST00000408444 86 ntBASIC1.7□□□□□ -2.14
PRICKLE3O43900 snoU13.25-201ENST00000458945 104 ntBASIC1.7□□□□□ -2.14
PRICKLE3O43900 AC125388.1-201ENST00000459631 156 ntBASIC1.7□□□□□ -2.14
PRICKLE3O43900 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.7□□□□□ -2.14
PRICKLE3O43900 MIR2115-201ENST00000516657 100 ntBASIC1.7□□□□□ -2.14
PRICKLE3O43900 RNU6-250P-201ENST00000516958 103 ntBASIC1.7□□□□□ -2.14
PRICKLE3O43900 MIR4484-201ENST00000582855 83 ntBASIC1.7□□□□□ -2.14
PRICKLE3O43900 AC084768.2-201ENST00000622736 221 ntBASIC1.7□□□□□ -2.14
PRICKLE3O43900 Y_RNA.224-201ENST00000364308 111 ntBASIC1.69□□□□□ -2.14
PRICKLE3O43900 SNORD48-201ENST00000364953 64 ntBASIC1.69□□□□□ -2.14
PRICKLE3O43900 Y_RNA.386-201ENST00000383913 105 ntBASIC1.69□□□□□ -2.14
PRICKLE3O43900 RNU7-62P-201ENST00000458856 62 ntBASIC1.69□□□□□ -2.14
PRICKLE3O43900 RNU6-1194P-201ENST00000516208 104 ntBASIC1.69□□□□□ -2.14
PRICKLE3O43900 RNU6-922P-201ENST00000516753 99 ntBASIC1.69□□□□□ -2.14
PRICKLE3O43900 RNU11-2P-201ENST00000516898 142 ntBASIC1.69□□□□□ -2.14
PRICKLE3O43900 MIR4491-201ENST00000581087 68 ntBASIC1.69□□□□□ -2.14
PRICKLE3O43900 uc_338.6-201ENST00000613544 171 ntBASIC1.69□□□□□ -2.14
PRICKLE3O43900 MIR377-201ENST00000362145 69 ntBASIC1.68□□□□□ -2.14
PRICKLE3O43900 RNU6-957P-201ENST00000363652 99 ntBASIC1.68□□□□□ -2.14
PRICKLE3O43900 MIR7-2-201ENST00000384970 110 ntBASIC1.68□□□□□ -2.14
PRICKLE3O43900 SNORD90-201ENST00000391145 111 ntBASIC1.68□□□□□ -2.14
PRICKLE3O43900 Y_RNA.588-201ENST00000391254 102 ntBASIC1.68□□□□□ -2.14
PRICKLE3O43900 SNORD63B-201ENST00000411005 70 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms