Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 Y_RNA.648-201ENST00000459455 110 ntBASIC1.99□□□□□ -2.09
SOX1O00570 AC079140.2-201ENST00000506193 142 ntBASIC1.99□□□□□ -2.09
SOX1O00570 MIR4491-201ENST00000581087 68 ntBASIC1.99□□□□□ -2.09
SOX1O00570 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.99□□□□□ -2.09
SOX1O00570 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
SOX1O00570 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.98□□□□□ -2.09
SOX1O00570 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
SOX1O00570 MIR96-201ENST00000362288 78 ntBASIC1.98□□□□□ -2.09
SOX1O00570 Y_RNA.94-201ENST00000363068 106 ntBASIC1.98□□□□□ -2.09
SOX1O00570 MIR30A-201ENST00000385092 71 ntBASIC1.98□□□□□ -2.09
SOX1O00570 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.98□□□□□ -2.09
SOX1O00570 AL645939.4-201ENST00000604495 135 ntBASIC1.98□□□□□ -2.09
SOX1O00570 uc_338.6-201ENST00000613544 171 ntBASIC1.98□□□□□ -2.09
SOX1O00570 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
SOX1O00570 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
SOX1O00570 MIR598-201ENST00000384868 97 ntBASIC1.97□□□□□ -2.09
SOX1O00570 MIR17-201ENST00000385012 84 ntBASIC1.97□□□□□ -2.09
SOX1O00570 SNORD93-201ENST00000408813 74 ntBASIC1.97□□□□□ -2.09
SOX1O00570 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.97□□□□□ -2.09
SOX1O00570 RNU7-153P-201ENST00000516455 62 ntBASIC1.97□□□□□ -2.09
SOX1O00570 MIR5694-201ENST00000581190 76 ntBASIC1.97□□□□□ -2.09
SOX1O00570 RNU4-58P-201ENST00000363192 141 ntBASIC1.96□□□□□ -2.1
SOX1O00570 RNU4-32P-201ENST00000363404 141 ntBASIC1.96□□□□□ -2.1
SOX1O00570 RNU6-654P-201ENST00000364373 107 ntBASIC1.96□□□□□ -2.1
SOX1O00570 RNU6-53P-201ENST00000365367 106 ntBASIC1.96□□□□□ -2.1
SOX1O00570 RNU6-1065P-201ENST00000384513 106 ntBASIC1.96□□□□□ -2.1
SOX1O00570 RNU6-1254P-201ENST00000391266 104 ntBASIC1.96□□□□□ -2.1
SOX1O00570 RNU7-85P-201ENST00000458851 63 ntBASIC1.96□□□□□ -2.1
SOX1O00570 AC005908.1-201ENST00000468701 347 ntBASIC1.96□□□□□ -2.1
SOX1O00570 AC023790.1-201ENST00000482174 347 ntBASIC1.96□□□□□ -2.1
SOX1O00570 AC104435.1-201ENST00000483483 166 ntBASIC1.96□□□□□ -2.1
SOX1O00570 SNORA25.13-201ENST00000516395 103 ntBASIC1.96□□□□□ -2.1
SOX1O00570 MIR4255-201ENST00000579351 72 ntBASIC1.96□□□□□ -2.1
SOX1O00570 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
SOX1O00570 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.95□□□□□ -2.1
SOX1O00570 SNORD36A-201ENST00000362874 73 ntBASIC1.95□□□□□ -2.1
SOX1O00570 RNU6-776P-201ENST00000364403 104 ntBASIC1.95□□□□□ -2.1
SOX1O00570 RNU6-1022P-201ENST00000365049 104 ntBASIC1.95□□□□□ -2.1
SOX1O00570 SNORA72.6-201ENST00000384520 129 ntBASIC1.95□□□□□ -2.1
SOX1O00570 RNU6-243P-201ENST00000391140 107 ntBASIC1.95□□□□□ -2.1
SOX1O00570 RNU6-531P-201ENST00000516694 104 ntBASIC1.95□□□□□ -2.1
SOX1O00570 MIR3664-201ENST00000579074 99 ntBASIC1.95□□□□□ -2.1
SOX1O00570 MIR5002-201ENST00000584713 97 ntBASIC1.95□□□□□ -2.1
SOX1O00570 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.95□□□□□ -2.1
SOX1O00570 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
SOX1O00570 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
SOX1O00570 MIR516A2-201ENST00000384888 90 ntBASIC1.94□□□□□ -2.1
SOX1O00570 MIR516A1-201ENST00000385033 90 ntBASIC1.94□□□□□ -2.1
SOX1O00570 Y_RNA.588-201ENST00000391254 102 ntBASIC1.94□□□□□ -2.1
SOX1O00570 RNA5SP95-201ENST00000410319 137 ntBASIC1.94□□□□□ -2.1
SOX1O00570 AL356379.1-201ENST00000414105 126 ntBASIC1.94□□□□□ -2.1
SOX1O00570 AC019176.1-201ENST00000518519 225 ntBASIC1.94□□□□□ -2.1
SOX1O00570 MIR4536-1-201ENST00000583537 88 ntBASIC1.94□□□□□ -2.1
SOX1O00570 MIR4712-201ENST00000583750 82 ntBASIC1.94□□□□□ -2.1
SOX1O00570 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.94□□□□□ -2.1
SOX1O00570 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
SOX1O00570 SNORA7.1-201ENST00000363750 139 ntBASIC1.93□□□□□ -2.1
SOX1O00570 RNU1-36P-201ENST00000365130 165 ntBASIC1.93□□□□□ -2.1
SOX1O00570 SNORA25.16-201ENST00000516741 121 ntBASIC1.93□□□□□ -2.1
SOX1O00570 MIR3937-201ENST00000580135 106 ntBASIC1.93□□□□□ -2.1
SOX1O00570 MIR502-201ENST00000606349 86 ntBASIC1.93□□□□□ -2.1
SOX1O00570 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
SOX1O00570 RNA5SP37-201ENST00000365420 130 ntBASIC1.92□□□□□ -2.1
SOX1O00570 RNU6-1194P-201ENST00000516208 104 ntBASIC1.92□□□□□ -2.1
SOX1O00570 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
SOX1O00570 RNU6-315P-201ENST00000362666 107 ntBASIC1.91□□□□□ -2.1
SOX1O00570 RNU6-403P-201ENST00000363163 104 ntBASIC1.91□□□□□ -2.1
SOX1O00570 RNU6-624P-201ENST00000363411 107 ntBASIC1.91□□□□□ -2.1
SOX1O00570 RNU1-42P-201ENST00000364033 160 ntBASIC1.91□□□□□ -2.1
SOX1O00570 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
SOX1O00570 RNU6-129P-201ENST00000391022 107 ntBASIC1.91□□□□□ -2.1
SOX1O00570 snoU13.11-201ENST00000459219 104 ntBASIC1.91□□□□□ -2.1
SOX1O00570 RNU6-65P-201ENST00000516332 98 ntBASIC1.91□□□□□ -2.1
SOX1O00570 AL627230.6-201ENST00000611129 280 ntBASIC1.91□□□□□ -2.1
SOX1O00570 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.91□□□□□ -2.1
SOX1O00570 AL161722.3-201ENST00000605789 2983 ntBASIC1.9□□□□□ -2.1
SOX1O00570 RNU6-1054P-201ENST00000411293 104 ntBASIC1.9□□□□□ -2.11
SOX1O00570 RNA5SP233-201ENST00000459153 113 ntBASIC1.9□□□□□ -2.11
SOX1O00570 RNU6-165P-201ENST00000517170 99 ntBASIC1.9□□□□□ -2.11
SOX1O00570 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.9□□□□□ -2.11
SOX1O00570 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.89□□□□□ -2.11
SOX1O00570 RNU7-185P-201ENST00000459215 60 ntBASIC1.89□□□□□ -2.11
SOX1O00570 RNU7-106P-201ENST00000459514 67 ntBASIC1.89□□□□□ -2.11
SOX1O00570 AL512310.8-201ENST00000550183 120 ntBASIC1.89□□□□□ -2.11
SOX1O00570 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.89□□□□□ -2.11
SOX1O00570 AL157834.3-201ENST00000615543 103 ntBASIC1.89□□□□□ -2.11
SOX1O00570 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.89□□□□□ -2.11
SOX1O00570 SNORD113.3-201ENST00000364630 78 ntBASIC1.88□□□□□ -2.11
SOX1O00570 RNU6-811P-201ENST00000384069 107 ntBASIC1.88□□□□□ -2.11
SOX1O00570 MIR635-201ENST00000384830 98 ntBASIC1.88□□□□□ -2.11
SOX1O00570 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
SOX1O00570 RNA5SP338-201ENST00000410495 85 ntBASIC1.88□□□□□ -2.11
SOX1O00570 SNORD63B-201ENST00000411005 70 ntBASIC1.88□□□□□ -2.11
SOX1O00570 RNU1-40P-201ENST00000516816 164 ntBASIC1.88□□□□□ -2.11
SOX1O00570 RNU1-97P-201ENST00000516872 164 ntBASIC1.88□□□□□ -2.11
SOX1O00570 MIR3198-2-201ENST00000577868 80 ntBASIC1.88□□□□□ -2.11
SOX1O00570 MIR4796-201ENST00000580742 81 ntBASIC1.88□□□□□ -2.11
SOX1O00570 RNU7-10P-201ENST00000607194 63 ntBASIC1.88□□□□□ -2.11
SOX1O00570 AP000553.5-201ENST00000641933 54 ntBASIC1.88□□□□□ -2.11
SOX1O00570 AC023934.1-201ENST00000574529 2389 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 457.3 ms