Protein–RNA interactions for Protein: A6NCS4

NKX2-6, Homeobox protein Nkx-2.6, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-6A6NCS4 SNORD115-24-201ENST00000363528 82 ntBASIC0.14□□□□□ -2.39
NKX2-6A6NCS4 Y_RNA.257-201ENST00000364596 102 ntBASIC0.14□□□□□ -2.39
NKX2-6A6NCS4 Y_RNA.294-201ENST00000364916 102 ntBASIC0.14□□□□□ -2.39
NKX2-6A6NCS4 RNU6-804P-201ENST00000384286 107 ntBASIC0.14□□□□□ -2.39
NKX2-6A6NCS4 RNU6-616P-201ENST00000384353 107 ntBASIC0.14□□□□□ -2.39
NKX2-6A6NCS4 MT-TG-201ENST00000387429 68 ntBASIC0.14□□□□□ -2.39
NKX2-6A6NCS4 RNU7-197P-201ENST00000458836 62 ntBASIC0.14□□□□□ -2.39
NKX2-6A6NCS4 RNU6-1232P-201ENST00000516299 86 ntBASIC0.14□□□□□ -2.39
NKX2-6A6NCS4 IGKV1-22-201ENST00000524313 326 ntBASIC0.14□□□□□ -2.39
NKX2-6A6NCS4 MIR4639-201ENST00000584938 69 ntBASIC0.14□□□□□ -2.39
NKX2-6A6NCS4 AL137067.1-201ENST00000615933 120 ntBASIC0.14□□□□□ -2.39
NKX2-6A6NCS4 SNORD116-18-201ENST00000383961 92 ntBASIC0.13□□□□□ -2.39
NKX2-6A6NCS4 MIRLET7F2-201ENST00000385277 83 ntBASIC0.13□□□□□ -2.39
NKX2-6A6NCS4 MT-TI-201ENST00000387365 69 ntBASIC0.13□□□□□ -2.39
NKX2-6A6NCS4 PCNPP3-201ENST00000393579 471 ntBASIC0.13□□□□□ -2.39
NKX2-6A6NCS4 AC069113.3-201ENST00000521019 150 ntBASIC0.13□□□□□ -2.39
NKX2-6A6NCS4 MIR5190-201ENST00000581537 80 ntBASIC0.13□□□□□ -2.39
NKX2-6A6NCS4 MIR6086-201ENST00000638065 55 ntBASIC0.13□□□□□ -2.39
NKX2-6A6NCS4 MIR6759-201ENST00000638110 65 ntBASIC0.13□□□□□ -2.39
NKX2-6A6NCS4 AC091304.10-201ENST00000641554 121 ntBASIC0.13□□□□□ -2.39
NKX2-6A6NCS4 Y_RNA.56-201ENST00000362798 112 ntBASIC0.12□□□□□ -2.39
NKX2-6A6NCS4 RNU6-915P-201ENST00000364943 103 ntBASIC0.12□□□□□ -2.39
NKX2-6A6NCS4 snosnR66.1-201ENST00000391095 99 ntBASIC0.12□□□□□ -2.39
NKX2-6A6NCS4 BX276092.1-201ENST00000427368 251 ntBASIC0.12□□□□□ -2.39
NKX2-6A6NCS4 RNA5SP272-201ENST00000516095 111 ntBASIC0.12□□□□□ -2.39
NKX2-6A6NCS4 RNU7-129P-201ENST00000516128 62 ntBASIC0.12□□□□□ -2.39
NKX2-6A6NCS4 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.12□□□□□ -2.39
NKX2-6A6NCS4 Y_RNA.778-201ENST00000620203 90 ntBASIC0.12□□□□□ -2.39
NKX2-6A6NCS4 Y_RNA.221-201ENST00000364248 96 ntBASIC0.11□□□□□ -2.39
NKX2-6A6NCS4 RNU6-449P-201ENST00000383914 107 ntBASIC0.11□□□□□ -2.39
NKX2-6A6NCS4 MIR1295A-201ENST00000408463 79 ntBASIC0.11□□□□□ -2.39
NKX2-6A6NCS4 RNU7-48P-201ENST00000458875 63 ntBASIC0.11□□□□□ -2.39
NKX2-6A6NCS4 TRAJ51-201ENST00000504127 63 ntBASIC0.11□□□□□ -2.39
NKX2-6A6NCS4 RNU6-135P-201ENST00000516769 101 ntBASIC0.11□□□□□ -2.39
NKX2-6A6NCS4 RNU7-161P-201ENST00000517289 62 ntBASIC0.11□□□□□ -2.39
NKX2-6A6NCS4 MIR3121-201ENST00000579680 77 ntBASIC0.11□□□□□ -2.39
NKX2-6A6NCS4 AC098479.1-201ENST00000609225 154 ntBASIC0.11□□□□□ -2.39
NKX2-6A6NCS4 SNORA42.1-201ENST00000363515 137 ntBASIC0.1□□□□□ -2.39
NKX2-6A6NCS4 Y_RNA.150-201ENST00000363562 102 ntBASIC0.1□□□□□ -2.39
NKX2-6A6NCS4 Y_RNA.299-201ENST00000364973 94 ntBASIC0.1□□□□□ -2.39
NKX2-6A6NCS4 RNU6-429P-201ENST00000384582 108 ntBASIC0.1□□□□□ -2.39
NKX2-6A6NCS4 SNORD77B-201ENST00000391112 67 ntBASIC0.1□□□□□ -2.39
NKX2-6A6NCS4 RNU7-104P-201ENST00000459398 79 ntBASIC0.1□□□□□ -2.39
NKX2-6A6NCS4 RNU7-2P-201ENST00000516096 62 ntBASIC0.1□□□□□ -2.39
NKX2-6A6NCS4 RNU7-6P-201ENST00000516845 62 ntBASIC0.1□□□□□ -2.39
NKX2-6A6NCS4 AC021753.1-201ENST00000635724 168 ntBASIC0.1□□□□□ -2.39
NKX2-6A6NCS4 MIR499B-201ENST00000636498 73 ntBASIC0.1□□□□□ -2.39
NKX2-6A6NCS4 Y_RNA.398-201ENST00000383952 99 ntBASIC0.09□□□□□ -2.4
NKX2-6A6NCS4 MIR760-201ENST00000390220 80 ntBASIC0.09□□□□□ -2.4
NKX2-6A6NCS4 MIR548L-201ENST00000408303 86 ntBASIC0.09□□□□□ -2.4
NKX2-6A6NCS4 RNU6-394P-201ENST00000410735 107 ntBASIC0.09□□□□□ -2.4
NKX2-6A6NCS4 Y_RNA.773-201ENST00000607168 90 ntBASIC0.09□□□□□ -2.4
NKX2-6A6NCS4 MIR376B-201ENST00000614515 100 ntBASIC0.09□□□□□ -2.4
NKX2-6A6NCS4 AC087741.2-201ENST00000619415 172 ntBASIC0.09□□□□□ -2.4
NKX2-6A6NCS4 MIR4315-1-201ENST00000636800 73 ntBASIC0.09□□□□□ -2.4
NKX2-6A6NCS4 MIR4315-2-201ENST00000640925 73 ntBASIC0.09□□□□□ -2.4
NKX2-6A6NCS4 Y_RNA.98-201ENST00000363109 102 ntBASIC0.08□□□□□ -2.4
NKX2-6A6NCS4 Y_RNA.114-201ENST00000363265 113 ntBASIC0.08□□□□□ -2.4
NKX2-6A6NCS4 RNU6-1099P-201ENST00000363533 107 ntBASIC0.08□□□□□ -2.4
NKX2-6A6NCS4 RNU6-726P-201ENST00000364680 107 ntBASIC0.08□□□□□ -2.4
NKX2-6A6NCS4 Y_RNA.328-201ENST00000365208 113 ntBASIC0.08□□□□□ -2.4
NKX2-6A6NCS4 RNU6-1126P-201ENST00000384002 107 ntBASIC0.08□□□□□ -2.4
NKX2-6A6NCS4 Y_RNA.785-201ENST00000384290 109 ntBASIC0.08□□□□□ -2.4
NKX2-6A6NCS4 MIR635-201ENST00000384830 98 ntBASIC0.08□□□□□ -2.4
NKX2-6A6NCS4 MIR643-201ENST00000385267 97 ntBASIC0.08□□□□□ -2.4
NKX2-6A6NCS4 MIR1263-201ENST00000408324 86 ntBASIC0.08□□□□□ -2.4
NKX2-6A6NCS4 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.08□□□□□ -2.4
NKX2-6A6NCS4 AC244505.6-201ENST00000452829 130 ntBASIC0.08□□□□□ -2.4
NKX2-6A6NCS4 RNU6-848P-201ENST00000515948 107 ntBASIC0.08□□□□□ -2.4
NKX2-6A6NCS4 RNU6-617P-201ENST00000516147 107 ntBASIC0.08□□□□□ -2.4
NKX2-6A6NCS4 RNU6-473P-201ENST00000516164 107 ntBASIC0.08□□□□□ -2.4
NKX2-6A6NCS4 RNU6-1049P-201ENST00000516414 107 ntBASIC0.08□□□□□ -2.4
NKX2-6A6NCS4 MTND5P41-201ENST00000517498 206 ntBASIC0.08□□□□□ -2.4
NKX2-6A6NCS4 AC138869.1-201ENST00000568623 124 ntBASIC0.08□□□□□ -2.4
NKX2-6A6NCS4 MIR3144-201ENST00000579460 79 ntBASIC0.08□□□□□ -2.4
NKX2-6A6NCS4 MIR548H5-201ENST00000580314 60 ntBASIC0.08□□□□□ -2.4
NKX2-6A6NCS4 MIR4768-201ENST00000585270 74 ntBASIC0.08□□□□□ -2.4
NKX2-6A6NCS4 RNU1-29P-201ENST00000606574 126 ntBASIC0.08□□□□□ -2.4
NKX2-6A6NCS4 AC090425.1-201ENST00000610007 140 ntBASIC0.08□□□□□ -2.4
NKX2-6A6NCS4 RNA5SP214-201ENST00000363378 118 ntBASIC0.07□□□□□ -2.4
NKX2-6A6NCS4 SNORD115-35-201ENST00000365122 82 ntBASIC0.07□□□□□ -2.4
NKX2-6A6NCS4 MIR34C-201ENST00000384831 77 ntBASIC0.07□□□□□ -2.4
NKX2-6A6NCS4 MIR513C-201ENST00000401352 84 ntBASIC0.07□□□□□ -2.4
NKX2-6A6NCS4 MIR1912-201ENST00000410389 80 ntBASIC0.07□□□□□ -2.4
NKX2-6A6NCS4 RNU6-735P-201ENST00000410612 107 ntBASIC0.07□□□□□ -2.4
NKX2-6A6NCS4 Y_RNA.692-201ENST00000516627 105 ntBASIC0.07□□□□□ -2.4
NKX2-6A6NCS4 Y_RNA.700-201ENST00000516806 100 ntBASIC0.07□□□□□ -2.4
NKX2-6A6NCS4 SNORA70.25-201ENST00000612741 95 ntBASIC0.07□□□□□ -2.4
NKX2-6A6NCS4 SNORA9.1-201ENST00000362412 131 ntBASIC0.06□□□□□ -2.4
NKX2-6A6NCS4 Y_RNA.127-201ENST00000363386 109 ntBASIC0.06□□□□□ -2.4
NKX2-6A6NCS4 RNU6-865P-201ENST00000364772 107 ntBASIC0.06□□□□□ -2.4
NKX2-6A6NCS4 Y_RNA.420-201ENST00000384043 110 ntBASIC0.06□□□□□ -2.4
NKX2-6A6NCS4 MIR599-201ENST00000385069 95 ntBASIC0.06□□□□□ -2.4
NKX2-6A6NCS4 RNU6-127P-201ENST00000390897 107 ntBASIC0.06□□□□□ -2.4
NKX2-6A6NCS4 MIR1265-201ENST00000408444 86 ntBASIC0.06□□□□□ -2.4
NKX2-6A6NCS4 RPL39P34-201ENST00000477141 156 ntBASIC0.06□□□□□ -2.4
NKX2-6A6NCS4 RN7SKP19-201ENST00000516016 252 ntBASIC0.06□□□□□ -2.4
NKX2-6A6NCS4 MIR4636-201ENST00000582271 80 ntBASIC0.06□□□□□ -2.4
NKX2-6A6NCS4 AC104408.1-201ENST00000605241 170 ntBASIC0.06□□□□□ -2.4
NKX2-6A6NCS4 AP001362.1-201ENST00000625165 124 ntBASIC0.06□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms