Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 AC105081.1-201ENST00000617727 106 ntBASIC1.36□□□□□ -2.19
CCDC187A0A096LP49 U6.70-201ENST00000620287 104 ntBASIC1.36□□□□□ -2.19
CCDC187A0A096LP49 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.36□□□□□ -2.19
CCDC187A0A096LP49 RNA5SP264-201ENST00000363115 107 ntBASIC1.35□□□□□ -2.19
CCDC187A0A096LP49 SNORA25.3-201ENST00000363205 127 ntBASIC1.35□□□□□ -2.19
CCDC187A0A096LP49 RNA5SP133-201ENST00000363368 119 ntBASIC1.35□□□□□ -2.19
CCDC187A0A096LP49 Y_RNA.426-201ENST00000384068 113 ntBASIC1.35□□□□□ -2.19
CCDC187A0A096LP49 Y_RNA.437-201ENST00000384113 113 ntBASIC1.35□□□□□ -2.19
CCDC187A0A096LP49 SNORA2B-201ENST00000384583 137 ntBASIC1.35□□□□□ -2.19
CCDC187A0A096LP49 MIR489-201ENST00000384923 84 ntBASIC1.35□□□□□ -2.19
CCDC187A0A096LP49 MIR563-201ENST00000385080 79 ntBASIC1.35□□□□□ -2.19
CCDC187A0A096LP49 RPS29P28-201ENST00000446439 141 ntBASIC1.35□□□□□ -2.19
CCDC187A0A096LP49 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.35□□□□□ -2.19
CCDC187A0A096LP49 AC048334.1-201ENST00000477975 159 ntBASIC1.35□□□□□ -2.19
CCDC187A0A096LP49 SNORA31.2-201ENST00000516019 134 ntBASIC1.35□□□□□ -2.19
CCDC187A0A096LP49 AC141846.1-201ENST00000568348 142 ntBASIC1.35□□□□□ -2.19
CCDC187A0A096LP49 AL513043.2-201ENST00000573941 143 ntBASIC1.35□□□□□ -2.19
CCDC187A0A096LP49 Y_RNA.94-201ENST00000363068 106 ntBASIC1.34□□□□□ -2.19
CCDC187A0A096LP49 Y_RNA.607-201ENST00000410597 98 ntBASIC1.34□□□□□ -2.19
CCDC187A0A096LP49 AL161932.1-201ENST00000437408 146 ntBASIC1.34□□□□□ -2.19
CCDC187A0A096LP49 RNU11-2P-201ENST00000516898 142 ntBASIC1.34□□□□□ -2.19
CCDC187A0A096LP49 MIR4452-201ENST00000583004 71 ntBASIC1.34□□□□□ -2.19
CCDC187A0A096LP49 PRELID3BP2-201ENST00000605362 201 ntBASIC1.34□□□□□ -2.19
CCDC187A0A096LP49 RNU6-90P-201ENST00000606352 106 ntBASIC1.34□□□□□ -2.19
CCDC187A0A096LP49 AL662814.1-201ENST00000617364 121 ntBASIC1.34□□□□□ -2.19
CCDC187A0A096LP49 MIR103A2-201ENST00000362154 78 ntBASIC1.33□□□□□ -2.2
CCDC187A0A096LP49 Y_RNA.98-201ENST00000363109 102 ntBASIC1.33□□□□□ -2.2
CCDC187A0A096LP49 RNU6-865P-201ENST00000364772 107 ntBASIC1.33□□□□□ -2.2
CCDC187A0A096LP49 RNU6-949P-201ENST00000384040 107 ntBASIC1.33□□□□□ -2.2
CCDC187A0A096LP49 RNU6-955P-201ENST00000410497 104 ntBASIC1.33□□□□□ -2.2
CCDC187A0A096LP49 Y_RNA.609-201ENST00000410669 89 ntBASIC1.33□□□□□ -2.2
CCDC187A0A096LP49 Y_RNA.611-201ENST00000410682 108 ntBASIC1.33□□□□□ -2.2
CCDC187A0A096LP49 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.33□□□□□ -2.2
CCDC187A0A096LP49 SNORA4-201ENST00000584302 138 ntBASIC1.33□□□□□ -2.2
CCDC187A0A096LP49 AC012676.2-201ENST00000619258 186 ntBASIC1.33□□□□□ -2.2
CCDC187A0A096LP49 AP001362.1-201ENST00000625165 124 ntBASIC1.33□□□□□ -2.2
CCDC187A0A096LP49 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.33□□□□□ -2.2
CCDC187A0A096LP49 RNY1P2-201ENST00000364820 117 ntBASIC1.32□□□□□ -2.2
CCDC187A0A096LP49 Y_RNA.316-201ENST00000365118 111 ntBASIC1.32□□□□□ -2.2
CCDC187A0A096LP49 RNU6-53P-201ENST00000365367 106 ntBASIC1.32□□□□□ -2.2
CCDC187A0A096LP49 RNU6-24P-201ENST00000384440 107 ntBASIC1.32□□□□□ -2.2
CCDC187A0A096LP49 SNORD38B-201ENST00000384690 67 ntBASIC1.32□□□□□ -2.2
CCDC187A0A096LP49 MIR181B2-201ENST00000385004 89 ntBASIC1.32□□□□□ -2.2
CCDC187A0A096LP49 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
CCDC187A0A096LP49 MIR1185-1-201ENST00000408598 86 ntBASIC1.32□□□□□ -2.2
CCDC187A0A096LP49 AC087499.7-201ENST00000441958 109 ntBASIC1.32□□□□□ -2.2
CCDC187A0A096LP49 SNORD38B-202ENST00000625943 69 ntBASIC1.32□□□□□ -2.2
CCDC187A0A096LP49 MIR26B-201ENST00000362251 77 ntBASIC1.31□□□□□ -2.2
CCDC187A0A096LP49 RNU6-396P-201ENST00000365369 105 ntBASIC1.31□□□□□ -2.2
CCDC187A0A096LP49 RNU6-1296P-201ENST00000383879 107 ntBASIC1.31□□□□□ -2.2
CCDC187A0A096LP49 RNU6-524P-201ENST00000384270 107 ntBASIC1.31□□□□□ -2.2
CCDC187A0A096LP49 RNU6-1237P-201ENST00000384777 107 ntBASIC1.31□□□□□ -2.2
CCDC187A0A096LP49 MIR320A-201ENST00000385302 82 ntBASIC1.31□□□□□ -2.2
CCDC187A0A096LP49 SPINT5P-201ENST00000448174 155 ntBASIC1.31□□□□□ -2.2
CCDC187A0A096LP49 snoU13.2-201ENST00000459201 104 ntBASIC1.31□□□□□ -2.2
CCDC187A0A096LP49 RNU6-65P-201ENST00000516332 98 ntBASIC1.31□□□□□ -2.2
CCDC187A0A096LP49 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.31□□□□□ -2.2
CCDC187A0A096LP49 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
CCDC187A0A096LP49 MIR30D-201ENST00000362283 70 ntBASIC1.3□□□□□ -2.2
CCDC187A0A096LP49 RNU6-652P-201ENST00000365488 107 ntBASIC1.3□□□□□ -2.2
CCDC187A0A096LP49 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
CCDC187A0A096LP49 RNU4-83P-201ENST00000410863 133 ntBASIC1.3□□□□□ -2.2
CCDC187A0A096LP49 SNRPGP12-201ENST00000449481 213 ntBASIC1.3□□□□□ -2.2
CCDC187A0A096LP49 MIR2115-201ENST00000516657 100 ntBASIC1.3□□□□□ -2.2
CCDC187A0A096LP49 AC019288.1-201ENST00000557918 224 ntBASIC1.3□□□□□ -2.2
CCDC187A0A096LP49 AC138749.4-201ENST00000563970 127 ntBASIC1.3□□□□□ -2.2
CCDC187A0A096LP49 MIR7974-201ENST00000615835 79 ntBASIC1.3□□□□□ -2.2
CCDC187A0A096LP49 MIR6740-201ENST00000618268 113 ntBASIC1.3□□□□□ -2.2
CCDC187A0A096LP49 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.3□□□□□ -2.2
CCDC187A0A096LP49 RNA5SP327-201ENST00000362494 101 ntBASIC1.29□□□□□ -2.2
CCDC187A0A096LP49 RNU6-910P-201ENST00000390844 107 ntBASIC1.29□□□□□ -2.2
CCDC187A0A096LP49 AC140658.3-201ENST00000567603 271 ntBASIC1.29□□□□□ -2.2
CCDC187A0A096LP49 MIR4712-201ENST00000583750 82 ntBASIC1.29□□□□□ -2.2
CCDC187A0A096LP49 AL078603.1-201ENST00000603824 313 ntBASIC1.29□□□□□ -2.2
CCDC187A0A096LP49 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.29□□□□□ -2.2
CCDC187A0A096LP49 uc_338.6-201ENST00000613544 171 ntBASIC1.29□□□□□ -2.2
CCDC187A0A096LP49 AC008163.1-202ENST00000636004 2889 ntBASIC1.29□□□□□ -2.2
CCDC187A0A096LP49 SNORA80D-201ENST00000384488 135 ntBASIC1.28□□□□□ -2.2
CCDC187A0A096LP49 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.28□□□□□ -2.2
CCDC187A0A096LP49 RNU7-85P-201ENST00000458851 63 ntBASIC1.28□□□□□ -2.2
CCDC187A0A096LP49 SNORA70.22-201ENST00000517160 124 ntBASIC1.28□□□□□ -2.2
CCDC187A0A096LP49 AC090897.1-201ENST00000580909 226 ntBASIC1.28□□□□□ -2.2
CCDC187A0A096LP49 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.28□□□□□ -2.2
CCDC187A0A096LP49 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.27□□□□□ -2.21
CCDC187A0A096LP49 Y_RNA.168-201ENST00000363740 102 ntBASIC1.27□□□□□ -2.21
CCDC187A0A096LP49 SNORA25.8-201ENST00000364831 128 ntBASIC1.27□□□□□ -2.21
CCDC187A0A096LP49 Y_RNA.363-201ENST00000365529 113 ntBASIC1.27□□□□□ -2.21
CCDC187A0A096LP49 RNU6-42P-201ENST00000384165 107 ntBASIC1.27□□□□□ -2.21
CCDC187A0A096LP49 SNORD38.2-201ENST00000384470 69 ntBASIC1.27□□□□□ -2.21
CCDC187A0A096LP49 MIR588-201ENST00000384900 83 ntBASIC1.27□□□□□ -2.21
CCDC187A0A096LP49 MIR519C-201ENST00000385053 87 ntBASIC1.27□□□□□ -2.21
CCDC187A0A096LP49 MT-TN-201ENST00000387400 73 ntBASIC1.27□□□□□ -2.21
CCDC187A0A096LP49 RNA5SP237-201ENST00000410414 113 ntBASIC1.27□□□□□ -2.21
CCDC187A0A096LP49 AL591704.2-201ENST00000421658 181 ntBASIC1.27□□□□□ -2.21
CCDC187A0A096LP49 SNORD4B-201ENST00000459083 72 ntBASIC1.27□□□□□ -2.21
CCDC187A0A096LP49 RNA5SP220-201ENST00000516298 104 ntBASIC1.27□□□□□ -2.21
CCDC187A0A096LP49 MIR3660-201ENST00000584845 100 ntBASIC1.27□□□□□ -2.21
CCDC187A0A096LP49 MIR6516-201ENST00000630554 81 ntBASIC1.27□□□□□ -2.21
CCDC187A0A096LP49 SNORD114-22-201ENST00000365423 72 ntBASIC1.26□□□□□ -2.21
CCDC187A0A096LP49 RNU6-480P-201ENST00000384332 107 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 1329.9 ms