Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 MIR320A-201ENST00000385302 82 ntBASIC1.55□□□□□ -2.16
CTDP1Q9Y5B0 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.55□□□□□ -2.16
CTDP1Q9Y5B0 RNU6-1165P-201ENST00000410119 107 ntBASIC1.55□□□□□ -2.16
CTDP1Q9Y5B0 RNU6-613P-201ENST00000410412 108 ntBASIC1.55□□□□□ -2.16
CTDP1Q9Y5B0 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.55□□□□□ -2.16
CTDP1Q9Y5B0 AC004941.2-201ENST00000427009 228 ntBASIC1.55□□□□□ -2.16
CTDP1Q9Y5B0 RNU7-48P-201ENST00000458875 63 ntBASIC1.55□□□□□ -2.16
CTDP1Q9Y5B0 RNU1-123P-201ENST00000458950 160 ntBASIC1.55□□□□□ -2.16
CTDP1Q9Y5B0 UBL5P1-201ENST00000507979 193 ntBASIC1.55□□□□□ -2.16
CTDP1Q9Y5B0 RN7SKP88-201ENST00000516847 250 ntBASIC1.55□□□□□ -2.16
CTDP1Q9Y5B0 7SK.8-201ENST00000612110 250 ntBASIC1.55□□□□□ -2.16
CTDP1Q9Y5B0 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.55□□□□□ -2.16
CTDP1Q9Y5B0 MIR376B-201ENST00000614515 100 ntBASIC1.55□□□□□ -2.16
CTDP1Q9Y5B0 7SK.11-201ENST00000615477 250 ntBASIC1.55□□□□□ -2.16
CTDP1Q9Y5B0 7SK.13-201ENST00000622040 250 ntBASIC1.55□□□□□ -2.16
CTDP1Q9Y5B0 Y_RNA.220-201ENST00000364244 109 ntBASIC1.54□□□□□ -2.16
CTDP1Q9Y5B0 MIR488-201ENST00000365739 83 ntBASIC1.54□□□□□ -2.16
CTDP1Q9Y5B0 RNU6-939P-201ENST00000384634 107 ntBASIC1.54□□□□□ -2.16
CTDP1Q9Y5B0 MIR563-201ENST00000385080 79 ntBASIC1.54□□□□□ -2.16
CTDP1Q9Y5B0 RNA5SP95-201ENST00000410319 137 ntBASIC1.54□□□□□ -2.16
CTDP1Q9Y5B0 SNORA4-201ENST00000584302 138 ntBASIC1.54□□□□□ -2.16
CTDP1Q9Y5B0 AC091304.10-201ENST00000641554 121 ntBASIC1.54□□□□□ -2.16
CTDP1Q9Y5B0 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.54□□□□□ -2.16
CTDP1Q9Y5B0 MIR377-201ENST00000362145 69 ntBASIC1.53□□□□□ -2.16
CTDP1Q9Y5B0 Y_RNA.95-201ENST00000363079 95 ntBASIC1.53□□□□□ -2.16
CTDP1Q9Y5B0 SNORD38.1-201ENST00000363863 68 ntBASIC1.53□□□□□ -2.16
CTDP1Q9Y5B0 Y_RNA.247-201ENST00000364500 92 ntBASIC1.53□□□□□ -2.16
CTDP1Q9Y5B0 AC096949.1-201ENST00000412047 152 ntBASIC1.53□□□□□ -2.16
CTDP1Q9Y5B0 RNU7-61P-201ENST00000515897 61 ntBASIC1.53□□□□□ -2.16
CTDP1Q9Y5B0 MIR548Z-201ENST00000584743 97 ntBASIC1.53□□□□□ -2.16
CTDP1Q9Y5B0 MIR7974-201ENST00000615835 79 ntBASIC1.53□□□□□ -2.16
CTDP1Q9Y5B0 MALAT1.1-201ENST00000618249 95 ntBASIC1.53□□□□□ -2.16
CTDP1Q9Y5B0 Y_RNA.96-201ENST00000363092 109 ntBASIC1.52□□□□□ -2.17
CTDP1Q9Y5B0 SNORA25.8-201ENST00000364831 128 ntBASIC1.52□□□□□ -2.17
CTDP1Q9Y5B0 RNU6-49P-201ENST00000384256 107 ntBASIC1.52□□□□□ -2.17
CTDP1Q9Y5B0 RNU6-644P-201ENST00000391155 98 ntBASIC1.52□□□□□ -2.17
CTDP1Q9Y5B0 AC048334.1-201ENST00000477975 159 ntBASIC1.52□□□□□ -2.17
CTDP1Q9Y5B0 RNU6-1006P-201ENST00000516998 103 ntBASIC1.52□□□□□ -2.17
CTDP1Q9Y5B0 AP001362.1-201ENST00000625165 124 ntBASIC1.52□□□□□ -2.17
CTDP1Q9Y5B0 MIR4679-1-201ENST00000637619 75 ntBASIC1.52□□□□□ -2.17
CTDP1Q9Y5B0 MIR30D-201ENST00000362283 70 ntBASIC1.51□□□□□ -2.17
CTDP1Q9Y5B0 Y_RNA.342-201ENST00000365352 113 ntBASIC1.51□□□□□ -2.17
CTDP1Q9Y5B0 SNORD38.2-201ENST00000384470 69 ntBASIC1.51□□□□□ -2.17
CTDP1Q9Y5B0 MT-TF-201ENST00000387314 71 ntBASIC1.51□□□□□ -2.17
CTDP1Q9Y5B0 RNU6-1054P-201ENST00000411293 104 ntBASIC1.51□□□□□ -2.17
CTDP1Q9Y5B0 MIR4777-201ENST00000583710 86 ntBASIC1.51□□□□□ -2.17
CTDP1Q9Y5B0 MIR4439-201ENST00000583746 80 ntBASIC1.51□□□□□ -2.17
CTDP1Q9Y5B0 Y_RNA.168-201ENST00000363740 102 ntBASIC1.5□□□□□ -2.17
CTDP1Q9Y5B0 RNU6-294P-201ENST00000364999 102 ntBASIC1.5□□□□□ -2.17
CTDP1Q9Y5B0 Y_RNA.330-201ENST00000365230 109 ntBASIC1.5□□□□□ -2.17
CTDP1Q9Y5B0 MRPL35P3-201ENST00000421557 364 ntBASIC1.5□□□□□ -2.17
CTDP1Q9Y5B0 AC109327.2-201ENST00000448339 378 ntBASIC1.5□□□□□ -2.17
CTDP1Q9Y5B0 SNORA31.2-201ENST00000516019 134 ntBASIC1.5□□□□□ -2.17
CTDP1Q9Y5B0 SEPT14P17-201ENST00000617978 177 ntBASIC1.5□□□□□ -2.17
CTDP1Q9Y5B0 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.49□□□□□ -2.17
CTDP1Q9Y5B0 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.49□□□□□ -2.17
CTDP1Q9Y5B0 Y_RNA.467-201ENST00000384297 102 ntBASIC1.49□□□□□ -2.17
CTDP1Q9Y5B0 SNORA2B-201ENST00000384583 137 ntBASIC1.49□□□□□ -2.17
CTDP1Q9Y5B0 RNY1P7-201ENST00000384743 110 ntBASIC1.49□□□□□ -2.17
CTDP1Q9Y5B0 U8.15-201ENST00000390947 134 ntBASIC1.49□□□□□ -2.17
CTDP1Q9Y5B0 SNORA40.6-201ENST00000391153 128 ntBASIC1.49□□□□□ -2.17
CTDP1Q9Y5B0 SPINT5P-201ENST00000448174 155 ntBASIC1.49□□□□□ -2.17
CTDP1Q9Y5B0 RNA5SP61-201ENST00000516453 100 ntBASIC1.49□□□□□ -2.17
CTDP1Q9Y5B0 Y_RNA.705-201ENST00000516862 110 ntBASIC1.49□□□□□ -2.17
CTDP1Q9Y5B0 MTND5P40-201ENST00000559945 246 ntBASIC1.49□□□□□ -2.17
CTDP1Q9Y5B0 uc_338.6-201ENST00000613544 171 ntBASIC1.49□□□□□ -2.17
CTDP1Q9Y5B0 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
CTDP1Q9Y5B0 RNY1P2-201ENST00000364820 117 ntBASIC1.48□□□□□ -2.17
CTDP1Q9Y5B0 RNU6-580P-201ENST00000365159 107 ntBASIC1.48□□□□□ -2.17
CTDP1Q9Y5B0 MIR548G-201ENST00000408442 89 ntBASIC1.48□□□□□ -2.17
CTDP1Q9Y5B0 AC004223.1-201ENST00000479840 271 ntBASIC1.48□□□□□ -2.17
CTDP1Q9Y5B0 RNU6-162P-201ENST00000516228 103 ntBASIC1.48□□□□□ -2.17
CTDP1Q9Y5B0 AC019288.1-201ENST00000557918 224 ntBASIC1.48□□□□□ -2.17
CTDP1Q9Y5B0 RNU6-90P-201ENST00000606352 106 ntBASIC1.48□□□□□ -2.17
CTDP1Q9Y5B0 U7.3-201ENST00000616123 62 ntBASIC1.48□□□□□ -2.17
CTDP1Q9Y5B0 MIR18B-201ENST00000454574 71 ntBASIC1.47□□□□□ -2.17
CTDP1Q9Y5B0 RNU6-844P-201ENST00000517175 102 ntBASIC1.47□□□□□ -2.17
CTDP1Q9Y5B0 RNU6-86P-201ENST00000606534 107 ntBASIC1.47□□□□□ -2.17
CTDP1Q9Y5B0 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.47□□□□□ -2.17
CTDP1Q9Y5B0 U6.109-201ENST00000636749 87 ntBASIC1.47□□□□□ -2.17
CTDP1Q9Y5B0 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.46□□□□□ -2.18
CTDP1Q9Y5B0 RNA5SP133-201ENST00000363368 119 ntBASIC1.46□□□□□ -2.18
CTDP1Q9Y5B0 Y_RNA.224-201ENST00000364308 111 ntBASIC1.46□□□□□ -2.18
CTDP1Q9Y5B0 RNU6-1163P-201ENST00000364516 107 ntBASIC1.46□□□□□ -2.18
CTDP1Q9Y5B0 Y_RNA.290-201ENST00000364879 114 ntBASIC1.46□□□□□ -2.18
CTDP1Q9Y5B0 RNU6-813P-201ENST00000384691 107 ntBASIC1.46□□□□□ -2.18
CTDP1Q9Y5B0 RNU6-972P-201ENST00000391208 107 ntBASIC1.46□□□□□ -2.18
CTDP1Q9Y5B0 RNU6-887P-201ENST00000410660 100 ntBASIC1.46□□□□□ -2.18
CTDP1Q9Y5B0 AC138749.4-201ENST00000563970 127 ntBASIC1.46□□□□□ -2.18
CTDP1Q9Y5B0 AC012676.2-201ENST00000619258 186 ntBASIC1.46□□□□□ -2.18
CTDP1Q9Y5B0 SNORD113.3-201ENST00000364630 78 ntBASIC1.45□□□□□ -2.18
CTDP1Q9Y5B0 Y_RNA.558-201ENST00000384685 113 ntBASIC1.45□□□□□ -2.18
CTDP1Q9Y5B0 Y_RNA.567-201ENST00000384736 106 ntBASIC1.45□□□□□ -2.18
CTDP1Q9Y5B0 SNORA75.2-201ENST00000391138 150 ntBASIC1.45□□□□□ -2.18
CTDP1Q9Y5B0 SNORA75.3-201ENST00000391231 150 ntBASIC1.45□□□□□ -2.18
CTDP1Q9Y5B0 SNORD93-201ENST00000408813 74 ntBASIC1.45□□□□□ -2.18
CTDP1Q9Y5B0 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.45□□□□□ -2.18
CTDP1Q9Y5B0 MIR3660-201ENST00000584845 100 ntBASIC1.45□□□□□ -2.18
CTDP1Q9Y5B0 RNU6-53P-201ENST00000365367 106 ntBASIC1.44□□□□□ -2.18
CTDP1Q9Y5B0 MIR758-201ENST00000390227 88 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 199.6 ms