Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 MIR514B-201ENST00000516774 80 ntBASIC2.46□□□□□ -2.02
CUEDC1Q9NWM3 MIR4648-201ENST00000580107 72 ntBASIC2.46□□□□□ -2.02
CUEDC1Q9NWM3 MIR8074-201ENST00000615081 81 ntBASIC2.46□□□□□ -2.02
CUEDC1Q9NWM3 NEAT1_2.1-201ENST00000620525 105 ntBASIC2.46□□□□□ -2.02
CUEDC1Q9NWM3 RNU6-439P-201ENST00000384188 106 ntBASIC2.45□□□□□ -2.02
CUEDC1Q9NWM3 SNORA8.1-201ENST00000384250 140 ntBASIC2.45□□□□□ -2.02
CUEDC1Q9NWM3 MT-TF-201ENST00000387314 71 ntBASIC2.45□□□□□ -2.02
CUEDC1Q9NWM3 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CUEDC1Q9NWM3 RNU4-37P-201ENST00000410214 84 ntBASIC2.45□□□□□ -2.02
CUEDC1Q9NWM3 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
CUEDC1Q9NWM3 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CUEDC1Q9NWM3 MIRLET7F1-201ENST00000362202 87 ntBASIC2.44□□□□□ -2.02
CUEDC1Q9NWM3 RNU6-53P-201ENST00000365367 106 ntBASIC2.44□□□□□ -2.02
CUEDC1Q9NWM3 MT-TN-201ENST00000387400 73 ntBASIC2.44□□□□□ -2.02
CUEDC1Q9NWM3 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
CUEDC1Q9NWM3 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
CUEDC1Q9NWM3 RNU6-1165P-201ENST00000410119 107 ntBASIC2.44□□□□□ -2.02
CUEDC1Q9NWM3 RNA5SP320-201ENST00000516263 124 ntBASIC2.44□□□□□ -2.02
CUEDC1Q9NWM3 SNORD111.1-201ENST00000516421 86 ntBASIC2.44□□□□□ -2.02
CUEDC1Q9NWM3 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.44□□□□□ -2.02
CUEDC1Q9NWM3 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CUEDC1Q9NWM3 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
CUEDC1Q9NWM3 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CUEDC1Q9NWM3 Y_RNA.42-201ENST00000362660 108 ntBASIC2.43□□□□□ -2.02
CUEDC1Q9NWM3 MIR194-1-201ENST00000384892 85 ntBASIC2.43□□□□□ -2.02
CUEDC1Q9NWM3 RNU4-53P-201ENST00000410828 140 ntBASIC2.43□□□□□ -2.02
CUEDC1Q9NWM3 RNA5SP247-201ENST00000411181 105 ntBASIC2.43□□□□□ -2.02
CUEDC1Q9NWM3 JTBP1-201ENST00000441314 247 ntBASIC2.43□□□□□ -2.02
CUEDC1Q9NWM3 RNU6-1194P-201ENST00000516208 104 ntBASIC2.43□□□□□ -2.02
CUEDC1Q9NWM3 RNU6-548P-201ENST00000517083 115 ntBASIC2.43□□□□□ -2.02
CUEDC1Q9NWM3 MIR6740-201ENST00000618268 113 ntBASIC2.43□□□□□ -2.02
CUEDC1Q9NWM3 RNU4-58P-201ENST00000363192 141 ntBASIC2.42□□□□□ -2.02
CUEDC1Q9NWM3 RNY4P3-201ENST00000365254 95 ntBASIC2.42□□□□□ -2.02
CUEDC1Q9NWM3 RNA5SP181-201ENST00000410246 98 ntBASIC2.42□□□□□ -2.02
CUEDC1Q9NWM3 RNA5SP489-201ENST00000410986 109 ntBASIC2.42□□□□□ -2.02
CUEDC1Q9NWM3 AC004965.1-201ENST00000413033 213 ntBASIC2.42□□□□□ -2.02
CUEDC1Q9NWM3 AL356320.1-201ENST00000429616 163 ntBASIC2.42□□□□□ -2.02
CUEDC1Q9NWM3 AL591806.2-201ENST00000433122 173 ntBASIC2.42□□□□□ -2.02
CUEDC1Q9NWM3 RNU7-106P-201ENST00000459514 67 ntBASIC2.42□□□□□ -2.02
CUEDC1Q9NWM3 RNA5SP402-201ENST00000517148 110 ntBASIC2.42□□□□□ -2.02
CUEDC1Q9NWM3 RNU7-156P-201ENST00000517214 74 ntBASIC2.42□□□□□ -2.02
CUEDC1Q9NWM3 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
CUEDC1Q9NWM3 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
CUEDC1Q9NWM3 RNU6-957P-201ENST00000363652 99 ntBASIC2.41□□□□□ -2.02
CUEDC1Q9NWM3 SNORD115-31-201ENST00000365318 82 ntBASIC2.41□□□□□ -2.02
CUEDC1Q9NWM3 MIR30A-201ENST00000385092 71 ntBASIC2.41□□□□□ -2.02
CUEDC1Q9NWM3 MIR27B-201ENST00000385129 97 ntBASIC2.41□□□□□ -2.02
CUEDC1Q9NWM3 MTND4LP19-201ENST00000403051 166 ntBASIC2.41□□□□□ -2.02
CUEDC1Q9NWM3 SNORD63B-201ENST00000411005 70 ntBASIC2.41□□□□□ -2.02
CUEDC1Q9NWM3 MIR5092-201ENST00000583139 88 ntBASIC2.41□□□□□ -2.02
CUEDC1Q9NWM3 AL096840.1-201ENST00000603287 93 ntBASIC2.41□□□□□ -2.02
CUEDC1Q9NWM3 AP000942.3-201ENST00000603702 160 ntBASIC2.41□□□□□ -2.02
CUEDC1Q9NWM3 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.41□□□□□ -2.02
CUEDC1Q9NWM3 AL161722.3-201ENST00000605789 2983 ntBASIC2.41□□□□□ -2.02
CUEDC1Q9NWM3 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CUEDC1Q9NWM3 AL359851.1-201ENST00000569460 4997 ntBASIC2.41□□□□□ -2.02
CUEDC1Q9NWM3 RNU6-1051P-201ENST00000365471 102 ntBASIC2.4□□□□□ -2.03
CUEDC1Q9NWM3 MIR519A1-201ENST00000385257 85 ntBASIC2.4□□□□□ -2.03
CUEDC1Q9NWM3 MIR1302-7-201ENST00000408841 72 ntBASIC2.4□□□□□ -2.03
CUEDC1Q9NWM3 SNORA31.11-201ENST00000516528 139 ntBASIC2.4□□□□□ -2.03
CUEDC1Q9NWM3 MIR2115-201ENST00000516657 100 ntBASIC2.4□□□□□ -2.03
CUEDC1Q9NWM3 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.4□□□□□ -2.03
CUEDC1Q9NWM3 RNU6-340P-201ENST00000364005 107 ntBASIC2.39□□□□□ -2.03
CUEDC1Q9NWM3 RNU6-681P-201ENST00000364012 104 ntBASIC2.39□□□□□ -2.03
CUEDC1Q9NWM3 RNU6-203P-201ENST00000384038 104 ntBASIC2.39□□□□□ -2.03
CUEDC1Q9NWM3 RNU6-154P-201ENST00000384306 106 ntBASIC2.39□□□□□ -2.03
CUEDC1Q9NWM3 SNORD90-201ENST00000391145 111 ntBASIC2.39□□□□□ -2.03
CUEDC1Q9NWM3 AC005520.4-201ENST00000604337 90 ntBASIC2.39□□□□□ -2.03
CUEDC1Q9NWM3 RNU7-10P-201ENST00000607194 63 ntBASIC2.39□□□□□ -2.03
CUEDC1Q9NWM3 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CUEDC1Q9NWM3 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.39□□□□□ -2.03
CUEDC1Q9NWM3 AC016717.2-201ENST00000609089 5141 ntBASIC2.38□□□□□ -2.03
CUEDC1Q9NWM3 RNU6-291P-201ENST00000384720 107 ntBASIC2.38□□□□□ -2.03
CUEDC1Q9NWM3 RNU6-205P-201ENST00000390858 107 ntBASIC2.38□□□□□ -2.03
CUEDC1Q9NWM3 snoU13.17-201ENST00000458802 104 ntBASIC2.38□□□□□ -2.03
CUEDC1Q9NWM3 RNU7-62P-201ENST00000458856 62 ntBASIC2.38□□□□□ -2.03
CUEDC1Q9NWM3 snoU13.9-201ENST00000458927 103 ntBASIC2.38□□□□□ -2.03
CUEDC1Q9NWM3 RPL30P7-201ENST00000479312 323 ntBASIC2.38□□□□□ -2.03
CUEDC1Q9NWM3 AC103810.8-201ENST00000607347 118 ntBASIC2.38□□□□□ -2.03
CUEDC1Q9NWM3 U4.3-201ENST00000621047 82 ntBASIC2.38□□□□□ -2.03
CUEDC1Q9NWM3 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CUEDC1Q9NWM3 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CUEDC1Q9NWM3 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CUEDC1Q9NWM3 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CUEDC1Q9NWM3 MIR377-201ENST00000362145 69 ntBASIC2.37□□□□□ -2.03
CUEDC1Q9NWM3 RNA5SP456-201ENST00000364002 114 ntBASIC2.37□□□□□ -2.03
CUEDC1Q9NWM3 Y_RNA.207-201ENST00000364142 106 ntBASIC2.37□□□□□ -2.03
CUEDC1Q9NWM3 Y_RNA.239-201ENST00000364444 113 ntBASIC2.37□□□□□ -2.03
CUEDC1Q9NWM3 RPS27P16-201ENST00000425758 201 ntBASIC2.37□□□□□ -2.03
CUEDC1Q9NWM3 RNA5SP458-201ENST00000516188 119 ntBASIC2.37□□□□□ -2.03
CUEDC1Q9NWM3 RNU6-531P-201ENST00000516694 104 ntBASIC2.37□□□□□ -2.03
CUEDC1Q9NWM3 MIR3192-201ENST00000584920 77 ntBASIC2.37□□□□□ -2.03
CUEDC1Q9NWM3 AL137847.3-201ENST00000611521 109 ntBASIC2.37□□□□□ -2.03
CUEDC1Q9NWM3 MIR8063-201ENST00000621930 81 ntBASIC2.37□□□□□ -2.03
CUEDC1Q9NWM3 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CUEDC1Q9NWM3 Y_RNA.606-201ENST00000410579 103 ntBASIC2.36□□□□□ -2.03
CUEDC1Q9NWM3 RN7SKP223-201ENST00000410582 62 ntBASIC2.36□□□□□ -2.03
CUEDC1Q9NWM3 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.36□□□□□ -2.03
CUEDC1Q9NWM3 MIR4491-201ENST00000581087 68 ntBASIC2.36□□□□□ -2.03
CUEDC1Q9NWM3 VPS35-212ENST00000640313 141 ntTSL 5 BASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 234.2 ms