Protein–RNA interactions for Protein: Q9H4L4

SENP3, Sentrin-specific protease 3, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3Q9H4L4 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
SENP3Q9H4L4 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SENP3Q9H4L4 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SENP3Q9H4L4 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SENP3Q9H4L4 RNU6-1008P-201ENST00000384160 104 ntBASIC4.88□□□□□ -1.63
SENP3Q9H4L4 SNORA31.2-201ENST00000516019 134 ntBASIC4.88□□□□□ -1.63
SENP3Q9H4L4 RNU5B-6P-201ENST00000516765 68 ntBASIC4.88□□□□□ -1.63
SENP3Q9H4L4 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.87□□□□□ -1.63
SENP3Q9H4L4 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC4.87□□□□□ -1.63
SENP3Q9H4L4 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
SENP3Q9H4L4 Y_RNA.174-201ENST00000363781 105 ntBASIC4.86□□□□□ -1.63
SENP3Q9H4L4 HMGN2P38-201ENST00000423806 265 ntBASIC4.86□□□□□ -1.63
SENP3Q9H4L4 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
SENP3Q9H4L4 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SENP3Q9H4L4 AP003355.3-201ENST00000623465 114 ntBASIC4.85□□□□□ -1.63
SENP3Q9H4L4 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.85□□□□□ -1.63
SENP3Q9H4L4 MIR579-201ENST00000385221 98 ntBASIC4.84□□□□□ -1.63
SENP3Q9H4L4 RNA5SP356-201ENST00000515972 94 ntBASIC4.84□□□□□ -1.63
SENP3Q9H4L4 RNU7-40P-201ENST00000516397 64 ntBASIC4.84□□□□□ -1.63
SENP3Q9H4L4 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SENP3Q9H4L4 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
SENP3Q9H4L4 MIR4435-1-201ENST00000582552 80 ntBASIC4.83□□□□□ -1.64
SENP3Q9H4L4 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SENP3Q9H4L4 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SENP3Q9H4L4 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC4.83□□□□□ -1.64
SENP3Q9H4L4 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.83□□□□□ -1.64
SENP3Q9H4L4 AC009487.2-201ENST00000420969 6821 ntBASIC4.82□□□□□ -1.64
SENP3Q9H4L4 JTBP1-201ENST00000441314 247 ntBASIC4.82□□□□□ -1.64
SENP3Q9H4L4 MIR4524B-201ENST00000581569 115 ntBASIC4.82□□□□□ -1.64
SENP3Q9H4L4 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
SENP3Q9H4L4 RNA5SP508-201ENST00000411327 119 ntBASIC4.81□□□□□ -1.64
SENP3Q9H4L4 AC036111.3-201ENST00000526389 112 ntBASIC4.81□□□□□ -1.64
SENP3Q9H4L4 GS1-279B7.1-204ENST00000641809 378 ntBASIC4.81□□□□□ -1.64
SENP3Q9H4L4 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
SENP3Q9H4L4 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC4.8□□□□□ -1.64
SENP3Q9H4L4 DEFA7P-201ENST00000382676 285 ntBASIC4.8□□□□□ -1.64
SENP3Q9H4L4 MIR627-201ENST00000384979 97 ntBASIC4.8□□□□□ -1.64
SENP3Q9H4L4 MIR517C-201ENST00000385103 95 ntBASIC4.8□□□□□ -1.64
SENP3Q9H4L4 MIR887-201ENST00000401258 79 ntBASIC4.8□□□□□ -1.64
SENP3Q9H4L4 MAPK10-373ENST00000641983 6772 ntBASIC4.8□□□□□ -1.64
SENP3Q9H4L4 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
SENP3Q9H4L4 AL359851.1-201ENST00000569460 4997 ntBASIC4.79□□□□□ -1.64
SENP3Q9H4L4 AC062016.1-201ENST00000355719 319 ntBASIC4.79□□□□□ -1.64
SENP3Q9H4L4 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SENP3Q9H4L4 Y_RNA.109-201ENST00000363215 102 ntBASIC4.78□□□□□ -1.64
SENP3Q9H4L4 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4.78□□□□□ -1.64
SENP3Q9H4L4 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.77□□□□□ -1.65
SENP3Q9H4L4 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SENP3Q9H4L4 Y_RNA.69-201ENST00000362885 109 ntBASIC4.77□□□□□ -1.65
SENP3Q9H4L4 RNA5SP42-201ENST00000364278 115 ntBASIC4.77□□□□□ -1.65
SENP3Q9H4L4 RNU6-59P-201ENST00000384787 107 ntBASIC4.77□□□□□ -1.65
SENP3Q9H4L4 AC022018.1-201ENST00000430685 241 ntBASIC4.77□□□□□ -1.65
SENP3Q9H4L4 RNU7-160P-201ENST00000516660 62 ntBASIC4.77□□□□□ -1.65
SENP3Q9H4L4 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SENP3Q9H4L4 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SENP3Q9H4L4 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
SENP3Q9H4L4 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
SENP3Q9H4L4 MIR3664-201ENST00000579074 99 ntBASIC4.76□□□□□ -1.65
SENP3Q9H4L4 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4.76□□□□□ -1.65
SENP3Q9H4L4 RNU1-141P-201ENST00000364623 158 ntBASIC4.75□□□□□ -1.65
SENP3Q9H4L4 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
SENP3Q9H4L4 RN7SL863P-201ENST00000462370 296 ntBASIC4.75□□□□□ -1.65
SENP3Q9H4L4 AL157834.3-201ENST00000615543 103 ntBASIC4.75□□□□□ -1.65
SENP3Q9H4L4 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SENP3Q9H4L4 RNU1-119P-201ENST00000391122 165 ntBASIC4.74□□□□□ -1.65
SENP3Q9H4L4 U6.96-201ENST00000636425 70 ntBASIC4.74□□□□□ -1.65
SENP3Q9H4L4 AC092427.1-202ENST00000430569 476 ntBASIC4.73□□□□□ -1.65
SENP3Q9H4L4 Y_RNA.676-201ENST00000516393 96 ntBASIC4.73□□□□□ -1.65
SENP3Q9H4L4 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SENP3Q9H4L4 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SENP3Q9H4L4 AC027290.2-201ENST00000623210 18662 ntBASIC4.73□□□□□ -1.65
SENP3Q9H4L4 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
SENP3Q9H4L4 MIR329-2-201ENST00000385029 84 ntBASIC4.72□□□□□ -1.65
SENP3Q9H4L4 SNORD41.1-201ENST00000391000 69 ntBASIC4.72□□□□□ -1.65
SENP3Q9H4L4 uc_338.32-201ENST00000615087 172 ntBASIC4.72□□□□□ -1.65
SENP3Q9H4L4 MIR7111-201ENST00000619751 72 ntBASIC4.72□□□□□ -1.65
SENP3Q9H4L4 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SENP3Q9H4L4 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SENP3Q9H4L4 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.71□□□□□ -1.65
SENP3Q9H4L4 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
SENP3Q9H4L4 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SENP3Q9H4L4 MIR519A2-201ENST00000384990 87 ntBASIC4.71□□□□□ -1.66
SENP3Q9H4L4 RNA5SP146-201ENST00000410743 123 ntBASIC4.71□□□□□ -1.66
SENP3Q9H4L4 AL451105.1-201ENST00000450005 189 ntBASIC4.71□□□□□ -1.66
SENP3Q9H4L4 AC245166.1-201ENST00000521012 253 ntBASIC4.71□□□□□ -1.66
SENP3Q9H4L4 MIR4804-201ENST00000581683 73 ntBASIC4.71□□□□□ -1.66
SENP3Q9H4L4 MIR3162-201ENST00000581818 82 ntBASIC4.71□□□□□ -1.66
SENP3Q9H4L4 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
SENP3Q9H4L4 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SENP3Q9H4L4 AC108938.1-201ENST00000451204 136 ntBASIC4.7□□□□□ -1.66
SENP3Q9H4L4 AC026333.2-201ENST00000542164 106 ntBASIC4.7□□□□□ -1.66
SENP3Q9H4L4 MIR4319-201ENST00000577285 85 ntBASIC4.7□□□□□ -1.66
SENP3Q9H4L4 AL136317.1-201ENST00000612653 226 ntBASIC4.7□□□□□ -1.66
SENP3Q9H4L4 AL773524.1-201ENST00000614065 229 ntBASIC4.7□□□□□ -1.66
SENP3Q9H4L4 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SENP3Q9H4L4 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SENP3Q9H4L4 MIR548L-201ENST00000408303 86 ntBASIC4.69□□□□□ -1.66
SENP3Q9H4L4 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC4.69□□□□□ -1.66
SENP3Q9H4L4 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SENP3Q9H4L4 RPS29P31-201ENST00000446147 164 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 267 ms